cyanobase » Synechocystis sp. PCC 6803 » genes » sll0226

GeneView: sll0226

GFF3

GeneAnnotation

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ID sll0226
Type protein_coding_gene
Gene symbol
ycf4
Gene symbolExtracted from literature
ycf4
Gene product

photosystem I assembly related protein

Gene productExtracted from literature
Sll0226, Ycf4
Functional category
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:149889..150455
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length567 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length188 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Mutant: HM-1
Genes and Mutantsposted by Annegret Wilde <Annegret=Wilde at rz.hu-berlin.de> at 2000-10-10
MutantNameHM-1
GeneNameycf4
ProductNameYcf4
Functionphotosystem I assembly
GeneticBackgroundPCC
DNAyes
Phenotypeyes
PhenotypeDetailsdecrease in photosystem I contentincrease in PSII contentincrease in phycocyanin-to-chlorophyll ratio
DrugDirectionRv
DrugMarkerkanamycin
Medline7780311
Mutant: KO Ycf4
Genes and Mutantsposted by Jochen Kruip <jochen.kruip at ruhr-uni-bochum.de> at 2000-10-16
MutantNameKO Ycf4
GeneNameycf4
ProductNameYcf4
FunctionInvolved in PS I Biogenesis
GeneticBackgroundGT
DNAyes
Phenotypeyes
PhenotypeDetailsreduced PS I content under stress conditions
DrugDirectionFw
DrugMarkerKm

Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009725.1/orthologs/sll0226.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase