cyanobase » Nostoc sp. PCC 7120 » genes » all3572

GeneView: all3572

GFF3

GeneAnnotation

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ID all3572
Type protein_coding_gene
Gene symbol
psbAIV
Gene symbolExtracted from literature
psbAIV, psbA2, psbA4, psbA
Gene product

photosystem II protein D1

Gene productExtracted from literature
D1
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthesis, light reaction (GO:0019684 External)
  • Biological Process: photosynthetic electron transport in photosystem II (GO:0009772 External)
  • Cellular Component: light-harvesting complex (GO:0030076 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Cellular Component: plasma membrane light-harvesting complex (GO:0030077 External)
  • Molecular Function: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (GO:0045156 External)

Genomic context

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Location Chr:4315437..4316519
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length1083 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length360 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Gene: psbAIV
Genes and Mutantsposted by Cosmin Ionel Sicora <cossic at utu.fi> at 2008-01-02
GeneNamepsbAIV
ProductNameD1:2 subunit of PSII
FunctionD1:2 replaces D1:1 under stress conditions.
Medline16388778

Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009705.1/orthologs/all3572.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase