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Full-text search result: 85 genes by "sulfur" TXT SET

Synechococcus sp. RCC307 (85 genes ) TXT SET

SynRCC307_0047 InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
SynRCC307_0625 InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
Blast Hits [TAIR_pep] AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS | CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE); cysteine desulfurase/ selenocysteine lyase/ transaminase | chr1:2685980-2688547 REVERSE
SynRCC307_1191 Gene product Cysteine desulfurase
InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
InterPro IPR016454 Cysteine desulfurase, NifS; HMMPIR:PIRSF005572 NifS
Blast Hits [TAIR_pep] AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP binding / cysteine desulfurase/ transaminase | chr5:26296349-26297710 FORWARD
Blast Hits [nr] ref|ZP_01124064.1| possible cysteine desulfurase (class-V aminotransferase family) protein [Synechococcus sp. WH 7805] gi|88787542|gb|EAR18699.1| possible cysteine desulfurase (class-V aminotransferase family) protein [Synechococcus sp. WH 7805]
Blast Hits [sprot] ISCS_HAEPS (sp|B8F356) Cysteine desulfurase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=iscS PE=3 SV=1
SynRCC307_1294 InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
SynRCC307_2015 GO term Molecular Function: cysteine desulfurase activity (GO:0031071)
InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
InterPro IPR010970 Cysteine desulfurase, SufS; HMMTigr:TIGR01979 sufS
Blast Hits [TAIR_pep] AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS | CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE); cysteine desulfurase/ selenocysteine lyase/ transaminase | chr1:2685980-2688547 REVERSE
Blast Hits [nr] ref|ZP_05045107.1| cysteine desulfurase 2 [Cyanobium sp. PCC 7001] gi|197625857|gb|EDY38416.1| cysteine desulfurase 2 [Cyanobium sp. PCC 7001]
Blast Hits [sprot] CSD_SYNY3 (sp|Q55793) Probable cysteine desulfurase OS=Synechocystis sp. (strain PCC 6803) GN=csd PE=1 SV=1
SynRCC307_2194 InterPro IPR002650 Sulphate adenylyltransferase; HMMPfam:PF01747 ATP-sulfurylase
Blast Hits [nr] ref|ZP_01084722.1| ATP-sulfurylase [Synechococcus sp. WH 5701] gi|87283456|gb|EAQ75411.1| ATP-sulfurylase [Synechococcus sp. WH 5701]
SynRCC307_2259 Gene product Cysteine desulfurase
InterPro IPR000192 Aminotransferase, class V/Cysteine desulfurase; HMMPfam:PF00266 Aminotran_5
InterPro IPR016454 Cysteine desulfurase, NifS; HMMPIR:PIRSF005572 NifS
Blast Hits [TAIR_pep] AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP binding / cysteine desulfurase/ transaminase | chr5:26296349-26297710 FORWARD
Blast Hits [nr] ref|ZP_05045718.1| cysteine desulfurase involved in Fe-S cluster formation [Cyanobium sp. PCC 7001] gi|197626468|gb|EDY39027.1| cysteine desulfurase involved in Fe-S cluster formation [Cyanobium sp. PCC 7001]
Blast Hits [sprot] ISCS_DECAR (sp|Q47EN5) Cysteine desulfurase OS=Dechloromonas aromatica (strain RCB) GN=iscS PE=3 SV=1
SynRCC307_0148 Gene product Glycolate oxidase iron-sulfur subunit
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [sprot] GLCF_BACSU (sp|P94534) Probable glycolate oxidase iron-sulfur subunit OS=Bacillus subtilis GN=glcF PE=4 SV=1
SynRCC307_0704 Gene product Cytochrome B6-F complex iron-sulfur subunit
GO term Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537)
Blast Hits [nr] ref|ZP_05789412.1| cytochrome b6-F complex iron-sulfur subunit [Synechococcus sp. WH 8109] gi|260413316|gb|EEX06612.1| cytochrome b6-F complex iron-sulfur subunit [Synechococcus sp. WH 8109]
Blast Hits [sprot] UCRI_SYNSC (sp|Q3ALY0) Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1
SynRCC307_0794 Gene product Predicted sulfurtransferase
SynRCC307_1566 Gene product protochlorophyllide reductase iron-sulfur ATP-binding protein
GO term Molecular Function: oxidoreductase activity, acting on iron-sulfur proteins as donors (GO:0016730)
Blast Hits [nr] ref|ZP_01469482.1| Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein [Synechococcus sp. BL107] gi|116064737|gb|EAU70496.1| Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein [Synechococcus sp. BL107]
Blast Hits [sprot] CHLL_SYNSC (sp|Q3ALL9) Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein OS=Synechococcus sp. (strain CC9605) GN=chlL PE=3 SV=1
SynRCC307_1736 Gene product Sulfur transfer protein involved in thiamine biosynthesis
GO term Biological Process: sulfur metabolic process (GO:0006790)
SynRCC307_2018 Gene product cysteine desulfurase activator complex subunit SufB
GO term Biological Process: iron-sulfur cluster assembly (GO:0016226)
Blast Hits [nr] ref|YP_382571.1| cysteine desulfurase activator complex subunit SufB [Synechococcus sp. CC9605] gi|78198251|gb|ABB36016.1| FeS assembly protein SufB [Synechococcus sp. CC9605]
SynRCC307_2273 Gene product Putative rhodanese-related sulfurtransferase
SynRCC307_0007 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0023 GO term Molecular Function: sulfurtransferase activity (GO:0016783)
SynRCC307_0103 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
SynRCC307_0133 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [sprot] PSAC_PROMA (sp|Q7V9R1) Photosystem I iron-sulfur center OS=Prochlorococcus marinus GN=psaC PE=3 SV=3
SynRCC307_0214 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
SynRCC307_0274 GO term Biological Process: iron-sulfur cluster assembly (GO:0016226)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0297 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0300 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0419 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [TAIR_pep] AT3G16250.1 | Symbols: NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding | chr3:5507091-5508320 REVERSE
SynRCC307_0548 GO term Biological Process: iron-sulfur cluster assembly (GO:0016226)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0598 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0604 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0665 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0744 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0793 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_0800 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
SynRCC307_0871 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [TAIR_pep] AT3G16250.1 | Symbols: NDF4 | NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); electron carrier/ iron-sulfur cluster binding | chr3:5507091-5508320 REVERSE
Blast Hits [nr] ref|ZP_05045036.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001] gi|197625786|gb|EDY38345.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001]
SynRCC307_1269 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1284 GO term Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor (GO:0016636)
SynRCC307_1336 GO term Molecular Function: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor (GO:0016671)
SynRCC307_1339 GO term Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [TAIR_pep] AT1G60950.1 | Symbols: FED A, ATFD2 | FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr1:22444565-22445011 FORWARD
SynRCC307_1367 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1370 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1490 GO term Biological Process: sulfur metabolic process (GO:0006790)
SynRCC307_1564 GO term Molecular Function: oxidoreductase activity, acting on iron-sulfur proteins as donors (GO:0016730)
SynRCC307_1565 GO term Molecular Function: oxidoreductase activity, acting on iron-sulfur proteins as donors (GO:0016730)
SynRCC307_1701 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [TAIR_pep] AT5G10000.1 | Symbols: ATFD4 | ATFD4 (ferredoxin 4); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr5:3126709-3127155 FORWARD
SynRCC307_2016 GO term Biological Process: iron-sulfur cluster assembly (GO:0016226)
SynRCC307_2061 GO term Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor (GO:0016636)
SynRCC307_2062 GO term Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor (GO:0016636)
SynRCC307_2114 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2162 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2178 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2182 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2223 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [nr] ref|ZP_05045482.1| iron-sulfur cluster binding protein [Cyanobium sp. PCC 7001] gi|197626232|gb|EDY38791.1| iron-sulfur cluster binding protein [Cyanobium sp. PCC 7001]
SynRCC307_2278 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2331 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
Blast Hits [TAIR_pep] AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
SynRCC307_2443 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2472 GO term Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537)
SynRCC307_2475 GO term Biological Process: sulfur metabolic process (GO:0006790)
SynRCC307_2482 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2492 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_2497 GO term Biological Process: sulfur metabolic process (GO:0006790)
Blast Hits [sprot] MOC2A_CHLRE (sp|A8JJB2) Molybdopterin synthase sulfur carrier subunit OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_109356 PE=3 SV=1
SynRCC307_2508 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
Blast Hits [TAIR_pep] AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
SynRCC307_2510 GO term Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1814 GO term Molecular Function: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor (GO:0016671)
Blast Hits [TAIR_pep] AT5G61640.1 | Symbols: PMSR1, ATMSRA1 | PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | chr5:24775107-24776147 FORWARD
SynRCC307_1842 GO term Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537)
GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
Blast Hits [TAIR_pep] AT2G27510.1 | Symbols: ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr2:11758281-11758748 REVERSE
SynRCC307_1875 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1954 GO term Molecular Function: iron-sulfur cluster binding (GO:0051536)
SynRCC307_1810 Blast Hits [nr] ref|YP_002479958.1| HEAT domain containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868945|gb|ACL49280.1| HEAT domain containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774]
SynRCC307_2385 Blast Hits [nr] ref|YP_003304516.1| TrkA-N domain protein [Sulfurospirillum deleyianum DSM 6946] gi|268618116|gb|ACZ12481.1| TrkA-N domain protein [Sulfurospirillum deleyianum DSM 6946]
Blast Hits [sprot] ARLY_SULSY (sp|B2V6Y7) Argininosuccinate lyase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=argH PE=3 SV=1
SynRCC307_0354 Blast Hits [sprot] ISU1_SCHPO (sp|Q9UTC6) Iron sulfur cluster assembly protein 1, mitochondrial OS=Schizosaccharomyces pombe GN=isu1 PE=1 SV=1
SynRCC307_0403 Blast Hits [sprot] HTPX_SULSY (sp|B2V995) Probable protease htpX homolog OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=htpX PE=3 SV=1
SynRCC307_1231 Blast Hits [sprot] SYI_SULNB (sp|A6QB84) Isoleucyl-tRNA synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=ileS PE=3 SV=1
SynRCC307_1303 Blast Hits [sprot] SELU_SULNB (sp|A6QBB6) tRNA 2-selenouridine synthase OS=Sulfurovum sp. (strain NBC37-1) GN=selU PE=3 SV=1
SynRCC307_1684 Blast Hits [sprot] IF11_DESDG (sp|Q30V89) Translation initiation factor IF-1 1 OS=Desulfovibrio desulfuricans (strain G20) GN=infA1 PE=3 SV=1
SynRCC307_2102 Blast Hits [TAIR_pep] AT5G55130.1 | Symbols: CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase | chr5:22373374-22376028 REVERSE
Blast Hits [sprot] MOCS3_AEDAE (sp|Q17CA7) Adenylyltransferase and sulfurtransferase MOCS3 OS=Aedes aegypti GN=AAEL004607 PE=3 SV=1
SynRCC307_2166 Blast Hits [pln_est] dbj|ES323869|ES323869 EoEST2140 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-2282 5' similar to Iron-sulfur assembly protein IscA, chloroplast precursor, mRNA sequence.
Blast Hits [sprot] ERPA_POLSQ (sp|A4T031) Putative iron--sulfur cluster insertion protein erpA OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=erpA PE=3 SV=1
SynRCC307_2342 Blast Hits [sprot] RUVX_SULNB (sp|A6Q7E9) Putative Holliday junction resolvase OS=Sulfurovum sp. (strain NBC37-1) GN=SUN_0448 PE=3 SV=1
SynRCC307_2287 Blast Hits [pln_est] dbj|DR112940|DR112940 RTS1_31_F12.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_31_F12_A029 5', mRNA sequence.
SynRCC307_0129 Blast Hits [TAIR_pep] AT2G29630.1 | Symbols: THIC | THIC (ThiaminC); ADP-ribose pyrophosphohydrolase/ catalytic/ iron-sulfur cluster binding | chr2:12667395-12669569 FORWARD
SynRCC307_0215 Blast Hits [TAIR_pep] ATCG00420.1 | Symbols: NDHJ | Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion. | chrC:48677-49153 REVERSE
SynRCC307_0724 Blast Hits [TAIR_pep] AT4G26500.1 | Symbols: EMB1374, CPSUFE, ATSUFE, SUFE1 | CPSUFE (CHLOROPLAST SULFUR E); enzyme activator/ transcription regulator | chr4:13382456-13383571 REVERSE
SynRCC307_0853 Blast Hits [TAIR_pep] AT3G48560.1 | Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1); acetolactate synthase/ pyruvate decarboxylase | chr3:18001530-18003542 REVERSE
SynRCC307_1430 Blast Hits [TAIR_pep] AT5G50210.1 | Symbols: QS, OLD5, SUFE3 | QS (QUINOLINATE SYNTHASE); 4 iron, 4 sulfur cluster binding / enzyme activator/ protein homodimerization/ quinolinate synthetase A | chr5:20442803-20445706 FORWARD
SynRCC307_1462 Blast Hits [TAIR_pep] AT5G60600.3 | Symbols: GCPE, ISPG, CSB3, CLB4, HDS | HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE); 4 iron, 4 sulfur cluster binding / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | chr5:24359447-24363019 FORWARD
SynRCC307_1545 Blast Hits [TAIR_pep] AT2G20610.1 | Symbols: SUR1, HLS3, RTY, ALF1, RTY1 | SUR1 (SUPERROOT 1); S-alkylthiohydroximate lyase/ carbon-sulfur lyase/ transaminase | chr2:8878150-8880298 REVERSE
SynRCC307_1573 Blast Hits [TAIR_pep] AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900447 FORWARD
SynRCC307_2084 Blast Hits [TAIR_pep] AT4G19540.1 | Symbols: INDL | INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE) | chr4:10657517-10659094 FORWARD
SynRCC307_2224 Blast Hits [TAIR_pep] AT4G37200.1 | Symbols: HCF164 | HCF164; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | chr4:17509836-17511230 REVERSE
SynRCC307_2489 Blast Hits [TAIR_pep] AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900447 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
1.591687207

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