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Full-text search result: 129 genes by "897" TXT SET

Synechococcus sp. RCC307 (129 genes ) TXT SET

SynRCC307_0011 InterPro IPR000897 Signal recognition particle, SRP54 subunit, GTPase; HMMPfam:PF00448 SRP54
InterPro IPR000897 Signal recognition particle, SRP54 subunit, GTPase; PatternScan:PS00300 SRP54
SynRCC307_0022 InterPro IPR008971 HSP40/DnaJ peptide-binding; superfamily:SSF49493 HSP40_DnaJ_pep
SynRCC307_0316 InterPro IPR008971 HSP40/DnaJ peptide-binding; superfamily:SSF49493 HSP40_DnaJ_pep
SynRCC307_0556 InterPro IPR014897 PBCV-specific basic adaptor; HMMPfam:PF08789 PBCV_basic_adap
SynRCC307_0583 InterPro IPR008972 Cupredoxin; Gene3D:G3DSA:2.60.40.420 Cupredoxin
InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynRCC307_0672 InterPro IPR008972 Cupredoxin; Gene3D:G3DSA:2.60.40.420 Cupredoxin
InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynRCC307_0816 InterPro IPR010293 Protein of unknown function DUF897; HMMPfam:PF05982 DUF897
SynRCC307_0840 InterPro IPR019897 YjgF-like protein, conserved site; PatternScan:PS01094 UPF0076
SynRCC307_0897 Gene product Zn-dependent carboxypeptidase
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Biological Process: proteolysis (GO:0006508)
GO term Molecular Function: metallocarboxypeptidase activity (GO:0004181)
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; FPrintScan:PR00998 CRBOXYPTASET
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; HMMPIR:PIRSF006615 Zn_crbxpep_Taq
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; HMMPfam:PF02074 Peptidase_M32
InterPro NULL NULL; superfamily:SSF55486 SSF55486
Blast Hits [TAIR_pep] AT5G05400.1 | Symbols: | disease resistance protein (CC-NBS-LRR class), putative | chr5:1597745-1600369 REVERSE
Blast Hits [nr] ref|ZP_05045427.1| carboxypeptidase [Cyanobium sp. PCC 7001] gi|197626177|gb|EDY38736.1| carboxypeptidase [Cyanobium sp. PCC 7001]
Blast Hits [pln_est] dbj|ES342941|ES342941 CTZ74-G05.x1d-t SHGC-CTZ Ostreococcus lucimarinus CCE9901 cDNA 3', mRNA sequence.
Blast Hits [sprot] CTAQ_THEAQ (sp|P42663) Thermostable carboxypeptidase 1 OS=Thermus aquaticus PE=1 SV=2
SynRCC307_0921 InterPro IPR008979 Galactose-binding domain-like; superfamily:SSF49785 Gal_bind_like
SynRCC307_1359 InterPro IPR008971 HSP40/DnaJ peptide-binding; superfamily:SSF49493 HSP40_DnaJ_pep
SynRCC307_1708 InterPro IPR000897 Signal recognition particle, SRP54 subunit, GTPase; HMMPfam:PF00448 SRP54
InterPro IPR000897 Signal recognition particle, SRP54 subunit, GTPase; PatternScan:PS00300 SRP54
SynRCC307_2175 InterPro IPR018971 Protein of unknown function DUF1997; HMMPfam:PF09366 DUF1997
SynRCC307_2215 InterPro IPR013702 FIST domain, N-terminal; HMMSmart:SM00897 FIST
SynRCC307_2318 InterPro IPR018971 Protein of unknown function DUF1997; HMMPfam:PF09366 DUF1997
SynRCC307_2384 InterPro IPR008978 HSP20-like chaperone; superfamily:SSF49764 HSP20_chap
SynRCC307_2405 InterPro NULL NULL; HMMPfam:PF06897 DUF1269
SynRCC307_1937 InterPro IPR008972 Cupredoxin; Gene3D:G3DSA:2.60.40.420 Cupredoxin
InterPro IPR008972 Cupredoxin; superfamily:SSF49503 Cupredoxin
SynRCC307_1897 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT3G29796.1 | Symbols: | unknown protein | chr3:11708561-11713028 FORWARD
Blast Hits [nr] ref|XP_313865.3| angiotensin-converting enzyme 9 (AGAP004563-PA) [Anopheles gambiae str. PEST] gi|116128616|gb|EAA09164.3| angiotensin-converting enzyme 9 (AGAP004563-PA) [Anopheles gambiae str. PEST]
SynRCC307_0393 GO term Molecular Function: holo-[acyl-carrier-protein] synthase activity (GO:0008897)
SynRCC307_0996 GO term Molecular Function: phosphoribulokinase activity (GO:0008974)
SynRCC307_1284 GO term Molecular Function: cobalt ion binding (GO:0050897)
SynRCC307_2061 GO term Molecular Function: cobalt ion binding (GO:0050897)
SynRCC307_2062 GO term Molecular Function: cobalt ion binding (GO:0050897)
SynRCC307_2503 GO term Molecular Function: polyphosphate kinase activity (GO:0008976)
SynRCC307_0085 Blast Hits [nr] ref|ZP_05045663.1| acetyltransferase [Cyanobium sp. PCC 7001] gi|197626413|gb|EDY38972.1| acetyltransferase [Cyanobium sp. PCC 7001]
SynRCC307_0115 Blast Hits [nr] ref|NP_896223.1| hypothetical protein SYNW0128 [Synechococcus sp. WH 8102] gi|78183739|ref|YP_376173.1| hypothetical protein Syncc9902_0155 [Synechococcus sp. CC9902] gi|78211663|ref|YP_380442.1| hypothetical protein Syncc9605_0111 [Synechococcus sp. CC9605] gi|116071682|ref|ZP_01468950.1| hypothetical protein BL107_06019 [Synechococcus sp. BL107] gi|260435794|ref|ZP_05789764.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|33632187|emb|CAE06643.1| conserved hypothetical protein [Synechococcus sp. WH 8102] gi|78168033|gb|ABB25130.1| conserved hypothetical protein [Synechococcus sp. CC9902] gi|78196122|gb|ABB33887.1| conserved hypothetical protein [Synechococcus sp. CC9605] gi|116065305|gb|EAU71063.1| hypothetical protein BL107_06019 [Synechococcus sp. BL107] gi|260413668|gb|EEX06964.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
SynRCC307_0194 Blast Hits [nr] ref|ZP_05638972.1| 3-oxoacyl-(acyl-carrier-protein) synthase III, putative [Pseudomonas syringae pv. tabaci ATCC 11528]
SynRCC307_0404 Blast Hits [nr] ref|ZP_01471102.1| hypothetical protein RS9916_35357 [Synechococcus sp. RS9916] gi|116069145|gb|EAU74897.1| hypothetical protein RS9916_35357 [Synechococcus sp. RS9916]
SynRCC307_0486 Blast Hits [nr] ref|ZP_05789756.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260413660|gb|EEX06956.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
SynRCC307_0487 Blast Hits [nr] ref|NP_897051.1| leukotoxin secretion protein [Synechococcus sp. WH 8102] gi|33632661|emb|CAE07473.1| similar to leukotoxin secretion protein [Synechococcus sp. WH 8102]
SynRCC307_0488 Blast Hits [nr] ref|NP_897052.1| putative multidrug efflux ABC transporter [Synechococcus sp. WH 8102] gi|33632662|emb|CAE07474.1| putative multidrug efflux ABC transporter [Synechococcus sp. WH 8102]
SynRCC307_0501 Blast Hits [nr] ref|NP_897429.1| hypothetical protein SYNW1336 [Synechococcus sp. WH 8102] gi|33633040|emb|CAE07851.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_0541 Blast Hits [nr] ref|NP_897990.1| putative tetrapyrrole methylase family protein [Synechococcus sp. WH 8102] gi|33633209|emb|CAE08414.1| putative tetrapyrrole methylase family protein [Synechococcus sp. WH 8102]
SynRCC307_0665 Blast Hits [nr] ref|NP_897958.1| oxidoreductase [Synechococcus sp. WH 8102] gi|33633177|emb|CAE08382.1| putative oxidoreductase, aldo/keto reductase family [Synechococcus sp. WH 8102]
SynRCC307_0671 Blast Hits [nr] ref|NP_897953.1| cytochrome c oxidase subunit I [Synechococcus sp. WH 8102] gi|33633172|emb|CAE08377.1| cytochrome c oxidase subunit I [Synechococcus sp. WH 8102]
SynRCC307_0674 Blast Hits [nr] ref|NP_897950.1| putative protoheme IX farnesyltransferase [Synechococcus sp. WH 8102] gi|81574068|sp|Q7U550.1|COXX_SYNPX RecName: Full=Protoheme IX farnesyltransferase; AltName: Full=Heme O synthase; AltName: Full=Heme B farnesyltransferase gi|33633169|emb|CAE08374.1| putative protoheme IX farnesyltransferase [Synechococcus sp. WH 8102]
SynRCC307_0711 Blast Hits [nr] ref|ZP_05788973.1| probable O-sialoglycoprotein endopeptidase [Synechococcus sp. WH 8109] gi|260412877|gb|EEX06173.1| probable O-sialoglycoprotein endopeptidase [Synechococcus sp. WH 8109]
SynRCC307_0820 Blast Hits [nr] ref|NP_897808.1| ribulose bisphosphate carboxylase, small chain [Synechococcus sp. WH 8102] gi|87123945|ref|ZP_01079795.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. RS9917] gi|88807728|ref|ZP_01123240.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. WH 7805] gi|116075360|ref|ZP_01472620.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. RS9916] gi|148239015|ref|YP_001224402.1| ribulose bisphosphate carboxylase small subunit [Synechococcus sp. WH 7803] gi|260434862|ref|ZP_05788832.1| ribulose bisphosphate carboxylase, small subunit [Synechococcus sp. WH 8109] gi|61230206|sp|P0A4S5.1|RBS_SYNPX RecName: Full=Ribulose bisphosphate carboxylase small chain; Short=RuBisCO small subunit gi|61230207|sp|P0A4S6.1|RBS_SYNPW RecName: Full=Ribulose bisphosphate carboxylase small chain; Short=RuBisCO small subunit gi|1850940|gb|AAB48081.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit [Synechococcus sp.] gi|33639224|emb|CAE08232.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. WH 8102] gi|82799255|gb|ABB92182.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small chain [uncultured marine type-A Synechococcus 4O4] gi|82799301|gb|ABB92227.1| ribulose bisphosphate carboxylase small chain [uncultured marine type-A Synechococcus 5B2] gi|86168514|gb|EAQ69771.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. RS9917] gi|88788942|gb|EAR20097.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. WH 7805] gi|90655467|gb|ABD96307.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [uncultured marine type-A Synechococcus GOM 3O6] gi|90655516|gb|ABD96355.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [uncultured marine type-A Synechococcus GOM 3O12] gi|90655552|gb|ABD96390.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [uncultured marine type-A Synechococcus GOM 4N23] gi|90655624|gb|ABD96460.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [uncultured marine type-A Synechococcus GOM 5D20] gi|116067557|gb|EAU73311.1| Ribulose bisphosphate carboxylase, small chain [Synechococcus sp. RS9916] gi|147847554|emb|CAK23105.1| Ribulose bisphosphate carboxylase small subunit [Synechococcus sp. WH 7803] gi|260412736|gb|EEX06032.1| ribulose bisphosphate carboxylase, small subunit [Synechococcus sp. WH 8109]
SynRCC307_0856 Blast Hits [nr] ref|NP_897840.1| methyltransferase [Synechococcus sp. WH 8102] gi|33639256|emb|CAE08264.1| possible methyltransferase [Synechococcus sp. WH 8102]
SynRCC307_0866 Blast Hits [nr] ref|NP_897853.1| membrane-associated protease [Synechococcus sp. WH 8102] gi|33639269|emb|CAE08277.1| Possible membrane associated protease [Synechococcus sp. WH 8102]
SynRCC307_0881 Blast Hits [nr] ref|NP_897866.1| putative divalent cation tolerance protein [Synechococcus sp. WH 8102] gi|33639282|emb|CAE08290.1| putative divalent cation tolerance protein [Synechococcus sp. WH 8102]
SynRCC307_0914 Blast Hits [nr] ref|NP_897595.1| hypothetical protein SYNW1502 [Synechococcus sp. WH 8102] gi|33639011|emb|CAE08017.1| hypothetical [Synechococcus sp. WH 8102]
SynRCC307_0920 Blast Hits [nr] ref|NP_897587.1| glycogen branching enzyme [Synechococcus sp. WH 8102] gi|90185228|sp|Q7U646.1|GLGB_SYNPX RecName: Full=1,4-alpha-glucan-branching enzyme; AltName: Full=Glycogen-branching enzyme; Short=BE; AltName: Full=1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase gi|33639003|emb|CAE08009.1| 1,4-alpha-glucan branching enzyme [Synechococcus sp. WH 8102]
SynRCC307_0944 Blast Hits [nr] ref|NP_897573.1| putative glucokinase [Synechococcus sp. WH 8102] gi|33638989|emb|CAE07995.1| Putative glucokinase [Synechococcus sp. WH 8102]
SynRCC307_1017 Blast Hits [nr] ref|NP_897415.1| putative ATP-dependent helicase [Synechococcus sp. WH 8102] gi|33633026|emb|CAE07837.1| putative ATP-dependent helicase [Synechococcus sp. WH 8102]
SynRCC307_1045 Blast Hits [nr] ref|NP_897435.1| putative endonuclease [Synechococcus sp. WH 8102] gi|33633046|emb|CAE07857.1| putative endonuclease [Synechococcus sp. WH 8102]
SynRCC307_1055 Blast Hits [nr] ref|NP_897497.1| hypothetical protein SYNW1404 [Synechococcus sp. WH 8102] gi|33633108|emb|CAE07919.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1060 Blast Hits [nr] ref|NP_897557.1| hypothetical protein SYNW1464 [Synechococcus sp. WH 8102] gi|33638973|emb|CAE07979.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1087 Blast Hits [nr] ref|YP_001225827.1| hypothetical protein SynWH7803_2104 [Synechococcus sp. WH 7803] gi|147848979|emb|CAK24530.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
SynRCC307_1128 Blast Hits [nr] ref|NP_897071.1| hypothetical protein SYNW0978 [Synechococcus sp. WH 8102] gi|33632681|emb|CAE07493.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1130 Blast Hits [nr] ref|YP_001017162.1| hypothetical protein P9303_11481 [Prochlorococcus marinus str. MIT 9303] gi|123963141|gb|ABM77897.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9303]
SynRCC307_1163 Blast Hits [nr] ref|ZP_01123272.1| hypothetical protein WH7805_14453 [Synechococcus sp. WH 7805] gi|88788974|gb|EAR20129.1| hypothetical protein WH7805_14453 [Synechococcus sp. WH 7805]
SynRCC307_1180 Blast Hits [nr] ref|NP_897882.1| hypothetical protein SYNW1791 [Synechococcus sp. WH 8102] gi|33639298|emb|CAE08306.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1188 Blast Hits [nr] ref|ZP_05045661.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626411|gb|EDY38970.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
SynRCC307_1213 Blast Hits [nr] ref|NP_897327.1| CsgA C-factor signaling protein [Synechococcus sp. WH 8102] gi|33632938|emb|CAE07749.1| possible CsgA C-factor signaling protein [Synechococcus sp. WH 8102]
SynRCC307_1225 Blast Hits [nr] ref|NP_897318.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102] gi|78184710|ref|YP_377145.1| 30S ribosomal protein S18 [Synechococcus sp. CC9902] gi|78212867|ref|YP_381646.1| 30S ribosomal protein S18 [Synechococcus sp. CC9605] gi|87124491|ref|ZP_01080340.1| ribosomal protein S18 [Synechococcus sp. RS9917] gi|88808524|ref|ZP_01124034.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805] gi|113953413|ref|YP_730544.1| 30S ribosomal protein S18 [Synechococcus sp. CC9311] gi|116070581|ref|ZP_01467850.1| 30S ribosomal protein S18 [Synechococcus sp. BL107] gi|148239628|ref|YP_001225015.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803] gi|194476530|ref|YP_002048709.1| 30S ribosomal protein S18 [Paulinella chromatophora] gi|254430586|ref|ZP_05044289.1| ribosomal protein S18 [Cyanobium sp. PCC 7001] gi|260436039|ref|ZP_05790009.1| ribosomal protein S18 [Synechococcus sp. WH 8109] gi|59798843|sp|Q7U6W1.1|RS18_SYNPX RecName: Full=30S ribosomal protein S18 gi|123327838|sp|Q0IAH8.1|RS18_SYNS3 RecName: Full=30S ribosomal protein S18 gi|123743319|sp|Q3AJZ1.1|RS18_SYNSC RecName: Full=30S ribosomal protein S18 gi|123743504|sp|Q3AVJ4.1|RS18_SYNS9 RecName: Full=30S ribosomal protein S18 gi|166222251|sp|A5GLA3.1|RS18_SYNPW RecName: Full=30S ribosomal protein S18 gi|205831408|sp|B1X3I0.1|RR18_PAUCH RecName: Full=30S ribosomal protein S18, organellar chromatophore gi|33632929|emb|CAE07740.1| 30S ribosomal protein S18 [Synechococcus sp. WH 8102] gi|78169004|gb|ABB26101.1| SSU ribosomal protein S18P [Synechococcus sp. CC9902] gi|78197326|gb|ABB35091.1| ribosomal protein S18 [Synechococcus sp. CC9605] gi|86168063|gb|EAQ69321.1| ribosomal protein S18 [Synechococcus sp. RS9917] gi|88787512|gb|EAR18669.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7805] gi|113880764|gb|ABI45722.1| ribosomal protein S18 [Synechococcus sp. CC9311] gi|116065986|gb|EAU71743.1| 30S ribosomal protein S18 [Synechococcus sp. BL107] gi|147848167|emb|CAK23718.1| 30S ribosomal protein S18 [Synechococcus sp. WH 7803] gi|171191537|gb|ACB42499.1| 30S ribosomal protein S18 [Paulinella chromatophora] gi|197625039|gb|EDY37598.1| ribosomal protein S18 [Cyanobium sp. PCC 7001] gi|260413913|gb|EEX07209.1| ribosomal protein S18 [Synechococcus sp. WH 8109]
SynRCC307_1232 Blast Hits [nr] ref|NP_897311.1| hypothetical protein SYNW1218 [Synechococcus sp. WH 8102] gi|33632922|emb|CAE07733.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1253 Blast Hits [nr] ref|NP_897211.1| glucose-1-phosphate adenylyltransferase [Synechococcus sp. WH 8102] gi|33632822|emb|CAE07633.1| ADP-glucose pyrophosphorylase [Synechococcus sp. WH 8102]
SynRCC307_1280 Blast Hits [nr] ref|NP_897181.1| hypothetical protein SYNW1088 [Synechococcus sp. WH 8102] gi|33632792|emb|CAE07603.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1289 Blast Hits [nr] ref|NP_897172.1| putative lipoprotein signal peptidase [Synechococcus sp. WH 8102] gi|81835113|sp|Q7U7A6.1|LSPA_SYNPX RecName: Full=Lipoprotein signal peptidase; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II gi|33632783|emb|CAE07594.1| putative lipoprotein signal peptidase [Synechococcus sp. WH 8102]
SynRCC307_1318 Blast Hits [nr] ref|NP_897142.1| hypothetical protein SYNW1049 [Synechococcus sp. WH 8102] gi|33632752|emb|CAE07564.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1366 Blast Hits [nr] ref|NP_897379.1| ABC transporter substrate-binding protein [Synechococcus sp. WH 8102] gi|33632990|emb|CAE07801.1| ABC transporter, substrate binding protein component, possibly phosphate [Synechococcus sp. WH 8102]
SynRCC307_1388 Blast Hits [nr] ref|NP_897383.1| photosystem I reaction center subunit X [Synechococcus sp. WH 8102] gi|38605167|sp|Q7U6P8.1|PSAK_SYNPX RecName: Full=Photosystem I reaction center subunit PsaK; AltName: Full=Photosystem I subunit X gi|33632994|emb|CAE07805.1| possible photosystem I reaction center subunit X (PsaK) [Synechococcus sp. WH 8102]
SynRCC307_1421 Blast Hits [nr] ref|NP_897545.1| membrane protein [Synechococcus sp. WH 8102] gi|33638961|emb|CAE07967.1| predicted membrane protein (COG2259) [Synechococcus sp. WH 8102]
SynRCC307_1430 Blast Hits [nr] ref|NP_897409.1| quinolinate synthetase [Synechococcus sp. WH 8102] gi|33633020|emb|CAE07831.1| Quinolinate synthetase A protein [Synechococcus sp. WH 8102]
SynRCC307_1443 Blast Hits [nr] ref|NP_897566.1| hypothetical protein SYNW1473 [Synechococcus sp. WH 8102] gi|33638982|emb|CAE07988.1| hypothetical [Synechococcus sp. WH 8102]
SynRCC307_1446 Blast Hits [nr] ref|NP_897406.1| muramidase [Synechococcus sp. WH 8102] gi|33633017|emb|CAE07828.1| possible muramidase, COG4678 [Synechococcus sp. WH 8102]
SynRCC307_1525 Blast Hits [nr] ref|NP_897424.1| high light inducible protein [Synechococcus sp. WH 8102] gi|33633035|emb|CAE07846.1| possible high light inducible protein [Synechococcus sp. WH 8102]
SynRCC307_1533 Blast Hits [nr] ref|NP_897504.1| hypothetical protein SYNW1411 [Synechococcus sp. WH 8102] gi|33633115|emb|CAE07926.1| hypothetical [Synechococcus sp. WH 8102]
SynRCC307_1540 Blast Hits [nr] ref|ZP_01124262.1| hypothetical protein WH7805_03642 [Synechococcus sp. WH 7805] gi|88787740|gb|EAR18897.1| hypothetical protein WH7805_03642 [Synechococcus sp. WH 7805]
SynRCC307_1557 Blast Hits [nr] ref|ZP_05789738.1| DNA helicase/exodeoxyribonuclease V, alpha subunit [Synechococcus sp. WH 8109] gi|260413642|gb|EEX06938.1| DNA helicase/exodeoxyribonuclease V, alpha subunit [Synechococcus sp. WH 8109]
SynRCC307_1562 Blast Hits [nr] ref|NP_897628.1| hypothetical protein SYNW1535 [Synechococcus sp. WH 8102] gi|33639044|emb|CAE08050.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1620 Blast Hits [nr] ref|NP_897597.1| hypothetical protein SYNW1504 [Synechococcus sp. WH 8102] gi|33639013|emb|CAE08019.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1623 Blast Hits [nr] ref|NP_897065.1| hypothetical protein SYNW0972 [Synechococcus sp. WH 8102] gi|33632675|emb|CAE07487.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1642 Blast Hits [nr] ref|NP_897894.1| hypothetical protein SYNW1803 [Synechococcus sp. WH 8102] gi|33639310|emb|CAE08318.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1654 Blast Hits [nr] ref|NP_897905.1| hypothetical protein SYNW1814 [Synechococcus sp. WH 8102] gi|33639321|emb|CAE08329.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_1741 Blast Hits [nr] ref|NP_897693.1| phenylalanyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|41018286|sp|Q7TTU6.1|SYFA_SYNPX RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gi|33639109|emb|CAE08115.1| Phenylalanyl-tRNA synthetase [Synechococcus sp. WH 8102]
SynRCC307_1788 Blast Hits [TAIR_pep] AT5G37500.1 | Symbols: GORK | GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ outward rectifier potassium channel | chr5:14889758-14894883 REVERSE
Blast Hits [nr] ref|NP_897112.1| transcriptional regulator [Synechococcus sp. WH 8102] gi|33632722|emb|CAE07534.1| possible transcriptional regulator [Synechococcus sp. WH 8102]
SynRCC307_1994 Blast Hits [nr] ref|NP_897462.1| hypothetical protein SYNW1369 [Synechococcus sp. WH 8102] gi|33633073|emb|CAE07884.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
SynRCC307_2105 Blast Hits [nr] ref|NP_895549.1| hypothetical protein PMT1722 [Prochlorococcus marinus str. MIT 9313] gi|33635573|emb|CAE21897.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313]
SynRCC307_2296 Blast Hits [nr] ref|ZP_01472841.1| hypothetical protein RS9916_38991 [Synechococcus sp. RS9916] gi|116066897|gb|EAU72652.1| hypothetical protein RS9916_38991 [Synechococcus sp. RS9916]
SynRCC307_2331 Blast Hits [nr] ref|YP_001224029.1| isopropylmalate isomerase large subunit [Synechococcus sp. WH 7803] gi|166989768|sp|A5GIG7.1|LEUC_SYNPW RecName: Full=3-isopropylmalate dehydratase large subunit; AltName: Full=Isopropylmalate isomerase; AltName: Full=Alpha-IPM isomerase; Short=IPMI gi|147847181|emb|CAK22732.1| 3-isopropylmalate dehydratase large subunit [Synechococcus sp. WH 7803]
SynRCC307_2394 Blast Hits [nr] ref|ZP_01084897.1| hypothetical protein WH5701_02020 [Synechococcus sp. WH 5701] gi|87283631|gb|EAQ75586.1| hypothetical protein WH5701_02020 [Synechococcus sp. WH 5701]
SynRCC307_2472 Blast Hits [nr] ref|NP_897511.1| putative Rieske [2Fe-2S] family protein [Synechococcus sp. WH 8102] gi|33633122|emb|CAE07933.1| Putative Rieske [2Fe-2S] family protein [Synechococcus sp. WH 8102]
SynRCC307_2473 Blast Hits [nr] ref|NP_897510.1| ABC transporter, nitrate-like, ATP binding component [Synechococcus sp. WH 8102] gi|33633121|emb|CAE07932.1| ABC transporter, nitrate-like, ATP binding component [Synechococcus sp. WH 8102]
SynRCC307_2476 Blast Hits [nr] ref|NP_897507.1| hydrogenase expression/formation protein HypB [Synechococcus sp. WH 8102] gi|33633118|emb|CAE07929.1| hydrogenase expression/formation protein HypB [Synechococcus sp. WH 8102]
SynRCC307_2505 Blast Hits [nr] ref|ZP_05789798.1| phosphatidate cytidylyltransferase [Synechococcus sp. WH 8109] gi|260413702|gb|EEX06998.1| phosphatidate cytidylyltransferase [Synechococcus sp. WH 8109]
SynRCC307_0701 Blast Hits [sprot] CBIF_METJA (sp|Q58973) Probable cobalt-precorrin-4 C(11)-methyltransferase OS=Methanocaldococcus jannaschii GN=cbiF PE=3 SV=1
SynRCC307_0163 Blast Hits [pln_est] gb|BE518971|BE518971 946075B10.y1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.
SynRCC307_0244 Blast Hits [pln_est] dbj|EC776401|EC776401 EST 12897 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence.
SynRCC307_0924 Blast Hits [pln_est] gb|GR189712|GR189712 CBPG13406.b1 CBPG Mimulus guttatus IM62 roots, seedlings, fruits, callus (L) Mimulus guttatus cDNA clone CBPG13406 5', mRNA sequence.
SynRCC307_1417 Blast Hits [pln_est] gb|FE489745|FE489745 CAOT4080.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT4080 5', mRNA sequence.
SynRCC307_1531 Blast Hits [pln_est] gb|GD024758|GD024758 CCHZ11897.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ11897 5', mRNA sequence.
SynRCC307_1719 Blast Hits [pln_est] gb|BG268979|BG268979 L0-2967T3 Ice plant Lambda Uni-Zap XR expression library, 0 hours NaCl treatment Mesembryanthemum crystallinum cDNA clone L0-2967 5', mRNA sequence.
SynRCC307_1810 Blast Hits [pln_est] dbj|DB989781|DB989781 DB989781 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult plant Glycine max cDNA clone GMFL02-50-C11 3', mRNA sequence.
SynRCC307_1883 Blast Hits [pln_est] dbj|DN263897|DN263897 Meso07631 Mesostigma vegetative library Mesostigma viride cDNA clone Meso2b28c01.r1, mRNA sequence.
SynRCC307_1887 Blast Hits [pln_est] gb|CA130897|CA130897 SCBFRT1065G04.g RT1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCBFRT1065G04 5', mRNA sequence.
SynRCC307_1948 Blast Hits [pln_est] gb|FG959086|FG959086 MA_PA64s_06897 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA sequence.
SynRCC307_2134 Blast Hits [pln_est] gb|CO089706|CO089706 GR__Ea09F03.f GR__Ea Gossypium raimondii cDNA clone GR__Ea09F03 5', mRNA sequence.
SynRCC307_2282 Blast Hits [pln_est] dbj|EX089768|EX089768 BR076058 flower cDNA library KFFB Brassica rapa subsp. pekinensis cDNA clone KFFB-066F03 5', mRNA sequence.
SynRCC307_0108 Blast Hits [TAIR_pep] AT3G03773.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: CS domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G02450.2). | chr3:951628-953490 FORWARD
SynRCC307_0168 Blast Hits [TAIR_pep] AT2G41800.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41810.1); Has 156 Blast hits to 155 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:17436671-17438005 REVERSE
SynRCC307_0232 Blast Hits [TAIR_pep] AT4G18270.1 | Symbols: ATTRANS11, TRANS11 | ATTRANS11; P-P-bond-hydrolysis-driven protein transmembrane transporter/ catalytic | chr4:10099364-10101897 REVERSE
SynRCC307_0371 Blast Hits [TAIR_pep] AT3G54270.1 | Symbols: | sucrose-phosphatase 3 (SPP3) | chr3:20087419-20089735 REVERSE
SynRCC307_0418 Blast Hits [TAIR_pep] ATCG00680.1 | Symbols: PSBB | encodes for CP47, subunit of the photosystem II reaction center. | chrC:72371-73897 FORWARD
SynRCC307_0771 Blast Hits [TAIR_pep] AT2G35390.2 | Symbols: | ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) | chr2:14895528-14897581 REVERSE
SynRCC307_0797 Blast Hits [TAIR_pep] AT4G01897.1 | Symbols: | unknown protein | chr4:820487-821466 REVERSE
SynRCC307_0824 Blast Hits [TAIR_pep] AT1G29980.1 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34510.1); Has 180 Blast hits to 163 proteins in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:10503411-10505994 REVERSE
SynRCC307_0869 Blast Hits [TAIR_pep] AT3G24590.1 | Symbols: PLSP1 | PLSP1 (plastidic type I signal peptidase 1); peptidase | chr3:8970694-8972020 FORWARD
SynRCC307_0994 Blast Hits [TAIR_pep] AT5G48970.1 | Symbols: | mitochondrial substrate carrier family protein | chr5:19857028-19859374 REVERSE
SynRCC307_1088 Blast Hits [TAIR_pep] AT5G35390.1 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr5:13596918-13598976 FORWARD
SynRCC307_1106 Blast Hits [TAIR_pep] AT5G45340.1 | Symbols: CYP707A3 | CYP707A3; (+)-abscisic acid 8'-hydroxylase/ oxygen binding | chr5:18368977-18370909 REVERSE
SynRCC307_1109 Blast Hits [TAIR_pep] AT4G34020.1 | Symbols: | DJ-1 family protein | chr4:16298553-16300897 REVERSE
SynRCC307_1139 Blast Hits [TAIR_pep] AT3G24590.1 | Symbols: PLSP1 | PLSP1 (plastidic type I signal peptidase 1); peptidase | chr3:8970694-8972020 FORWARD
SynRCC307_1176 Blast Hits [TAIR_pep] AT5G24740.1 | Symbols: | INVOLVED IN: protein localization; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1782 Blast hits to 981 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 1018; Fungi - 290; Plants - 104; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). | chr5:8470073-8489703 REVERSE
SynRCC307_1196 Blast Hits [TAIR_pep] AT2G38670.1 | Symbols: PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase | chr2:16168979-16171680 FORWARD
SynRCC307_1316 Blast Hits [TAIR_pep] AT2G22660.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G37900.1); Has 14843 Blast hits to 4550 proteins in 469 species: Archae - 40; Bacteria - 5555; Metazoa - 4422; Fungi - 897; Plants - 1977; Viruses - 191; Other Eukaryotes - 1761 (source: NCBI BLink). | chr2:9627737-9630840 FORWARD
SynRCC307_1347 Blast Hits [TAIR_pep] AT4G24620.1 | Symbols: PGI1, PGI | PGI1 (PHOSPHOGLUCOSE ISOMERASE 1); glucose-6-phosphate isomerase | chr4:12708972-12712610 REVERSE
SynRCC307_1515 Blast Hits [TAIR_pep] AT5G60060.1 | Symbols: | F-box family protein | chr5:24188600-24189724 REVERSE
SynRCC307_1573 Blast Hits [TAIR_pep] AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900447 FORWARD
SynRCC307_1634 Blast Hits [TAIR_pep] AT5G08360.1 | Symbols: | unknown protein | chr5:2689743-2690758 FORWARD
SynRCC307_2063 Blast Hits [TAIR_pep] AT5G24740.1 | Symbols: | INVOLVED IN: protein localization; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1782 Blast hits to 981 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 1018; Fungi - 290; Plants - 104; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). | chr5:8470073-8489703 REVERSE
SynRCC307_2095 Blast Hits [TAIR_pep] AT5G15110.1 | Symbols: | lyase/ pectate lyase | chr5:4895966-4897682 FORWARD
SynRCC307_2283 Blast Hits [TAIR_pep] AT2G38970.1 | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr2:16274135-16276651 FORWARD
SynRCC307_2311 Blast Hits [TAIR_pep] AT5G60880.2 | Symbols: | unknown protein | chr5:24488895-24489703 REVERSE
SynRCC307_2329 Blast Hits [TAIR_pep] AT4G18270.1 | Symbols: ATTRANS11, TRANS11 | ATTRANS11; P-P-bond-hydrolysis-driven protein transmembrane transporter/ catalytic | chr4:10099364-10101897 REVERSE
SynRCC307_2489 Blast Hits [TAIR_pep] AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900447 FORWARD
SynRCC307_2525 Blast Hits [TAIR_pep] AT4G18270.1 | Symbols: ATTRANS11, TRANS11 | ATTRANS11; P-P-bond-hydrolysis-driven protein transmembrane transporter/ catalytic | chr4:10099364-10101897 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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