cyanobase » Synechococcus sp. WH 7803 » genes » SynWH7803_0249

GeneView: SynWH7803_0249

GFF3

GeneAnnotation

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ID SynWH7803_0249
Type protein_coding_gene
Gene symbol
psbE
Gene symbolExtracted from literature
Gene product

Cytochrome b559 alpha subunit (PSII reaction center subunit V)

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthesis (GO:0015979 External)
  • Biological Process: photosynthesis, light reaction (GO:0019684 External)
  • Biological Process: photosynthetic electron transport chain (GO:0009767 External)
  • Cellular Component: integral to membrane (GO:0016021 External)
  • Cellular Component: photosystem II (GO:0009523 External)
  • Cellular Component: plasma membrane-derived thylakoid photosystem II (GO:0030096 External)
  • Cellular Component: plastid (GO:0009536 External)
  • Cellular Component: thylakoid (GO:0009579 External)
  • Molecular Function: heme binding (GO:0020037 External)
  • Molecular Function: metal ion binding (GO:0046872 External)

Genomic context

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Location Chr:274017..274265
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length249 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length82 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000063505.1/orthologs/SynWH7803_0249.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase