cyanobase » Synechococcus sp. JA-2-3B''a(2-13) » genes » CYB_0854

GeneView: CYB_0854

GFF3

GeneAnnotation

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ID CYB_0854
Type protein_coding_gene
Gene symbol
psbD-1
Gene symbolExtracted from literature
Gene product

photosystem II protein D2

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthesis, light reaction (GO:0019684 External)
  • Biological Process: photosynthesis, light reaction (GO:0019684 External)
  • Biological Process: photosynthetic electron transport in photosystem II (GO:0009772 External)
  • Biological Process: photosynthetic electron transport in photosystem II (GO:0009772 External)
  • Cellular Component: light-harvesting complex (GO:0030076 External)
  • Cellular Component: light-harvesting complex (GO:0030076 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Cellular Component: membrane (GO:0016020 External)
  • Cellular Component: plasma membrane light-harvesting complex (GO:0030077 External)
  • Cellular Component: plasma membrane light-harvesting complex (GO:0030077 External)
  • Molecular Function: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (GO:0045156 External)
  • Molecular Function: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (GO:0045156 External)

Genomic context

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Location Chr:888123..889181
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length1059 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length352 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Table view by InterProScan External
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TableView
GFF3

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000013225.1/orthologs/CYB_0854.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase