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Full-text search result: 108 genes by "553" TXT SET

Synechococcus sp. CC9605 (108 genes ) TXT SET

Syncc9605_0003 InterPro IPR016188 PurM, N-terminal-like; superfamily:SSF55326 PurM_N-like
Syncc9605_0030 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_0031 InterPro IPR016188 PurM, N-terminal-like; superfamily:SSF55326 PurM_N-like
Syncc9605_0067 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_0115 InterPro IPR005532 Sulphatase-modifying factor; Gene3D:G3DSA:3.90.1580.10 SO4-mod_fac-like
InterPro IPR005532 Sulphatase-modifying factor; HMMPfam:PF03781 DUF323
Syncc9605_0186 InterPro IPR016188 PurM, N-terminal-like; superfamily:SSF55326 PurM_N-like
Syncc9605_0234 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Blast Hits [pln_est] gb|CT915536|CT915536 CT915536 Phaeodactylum tricornutum iron starved (5nM of iron) Phaeodactylum tricornutum cDNA 5', mRNA sequence.
Syncc9605_0353 InterPro IPR011262 DNA-directed RNA polymerase, insert; superfamily:SSF56553 RNAP_insert
Syncc9605_0381 InterPro IPR001553 DNA recombination/repair protein, RecA/RadB; FPrintScan:PR00142 RECA
Syncc9605_0553 Gene product putative maleylacetoacetate isomerase
Function Posttranslational modification, protein turnover, chaperones: Posttranslational modification, protein turnover, chaperones
InterPro IPR004045 Glutathione S-transferase, N-terminal; HMMPfam:PF02798 GST_N
InterPro IPR004045 Glutathione S-transferase, N-terminal; ProfileScan:PS50404 GST_NTER
InterPro IPR010987 Glutathione S-transferase, C-terminal-like; Gene3D:G3DSA:1.20.1050.10 GST_C_like
InterPro IPR010987 Glutathione S-transferase, C-terminal-like; superfamily:SSF47616 GST_C_like
InterPro IPR012335 Thioredoxin fold; Gene3D:G3DSA:3.40.30.10 Thioredoxin_fold
InterPro IPR012336 Thioredoxin-like fold; superfamily:SSF52833 Thiordxn-like_fd
InterPro IPR017933 Glutathione S-transferase/chloride channel, C-terminal; ProfileScan:PS50405 GST_CTER
InterPro NULL NULL; HMMPanther:PTHR11260 PTHR11260
InterPro NULL NULL; HMMPanther:PTHR11260:SF8 PTHR11260:SF8
Blast Hits [TAIR_pep] AT2G02380.1 | Symbols: ATGSTZ2 | ATGSTZ2; catalytic/ glutathione transferase | chr2:626878-628569 FORWARD
Blast Hits [nr] ref|ZP_01471420.1| putative maleylacetoacetate isomerase [Synechococcus sp. RS9916] gi|116069463|gb|EAU75215.1| putative maleylacetoacetate isomerase [Synechococcus sp. RS9916]
Blast Hits [pln_est] dbj|EX271138|EX271138 1451452_5_A10_047 PY06 Carica papaya cDNA, mRNA sequence.
Blast Hits [sprot] MAAI_MOUSE (sp|Q9WVL0) Maleylacetoacetate isomerase OS=Mus musculus GN=Gstz1 PE=1 SV=1
Syncc9605_0414 InterPro IPR016188 PurM, N-terminal-like; superfamily:SSF55326 PurM N-terminal domain-like
Syncc9605_0830 InterPro IPR005945 Peptidase S33, tricorn interacting factor 1; HMMPIR:PIRSF005539 Pept_S33_TRI_F1
Syncc9605_0831 InterPro IPR005532 Sulphatase-modifying factor; Gene3D:G3DSA:3.90.1580.10 SO4-mod_fac-like
InterPro IPR005532 Sulphatase-modifying factor; HMMPfam:PF03781 DUF323
Syncc9605_0846 InterPro IPR008280 Tubulin/FtsZ, C-terminal; superfamily:SSF55307 Tub_FtsZ_C
Syncc9605_0868 InterPro NULL NULL; superfamily:SSF55315 SSF55315
Syncc9605_1073 InterPro NULL NULL; superfamily:SSF55331 SSF55331
Syncc9605_1111 InterPro IPR016188 PurM, N-terminal-like; superfamily:SSF55326 PurM_N-like
Syncc9605_1155 InterPro NULL NULL; superfamily:SSF55315 SSF55315
Syncc9605_1389 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_1486 InterPro IPR002123 Phospholipid/glycerol acyltransferase; HMMPfam:PF01553 Acyltransferase
Syncc9605_1658 InterPro IPR002123 Phospholipid/glycerol acyltransferase; HMMPfam:PF01553 Acyltransferase
Syncc9605_1829 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_1846 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_1918 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_1947 InterPro IPR004398 Conserved hypothetical protein CHP00095; HMMPIR:PIRSF004553 CHP00095
Syncc9605_1957 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_1970 InterPro NULL NULL; superfamily:SSF55347 SSF55347
Syncc9605_2145 InterPro NULL NULL; HMMPanther:PTHR12553 PTHR12553
InterPro NULL NULL; HMMPanther:PTHR12553:SF6 PTHR12553:SF6
Syncc9605_2214 InterPro IPR002123 Phospholipid/glycerol acyltransferase; HMMPfam:PF01553 Acyltransferase
Syncc9605_2255 InterPro IPR010935 SMCs flexible hinge; superfamily:SSF75553 SMC_hinge
Syncc9605_2388 InterPro IPR002123 Phospholipid/glycerol acyltransferase; HMMPfam:PF01553 Acyltransferase
Syncc9605_1553 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT3G52860.1 | Symbols: | unknown protein | chr3:19591998-19592741 REVERSE
Blast Hits [nr] ref|ZP_05790219.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260414123|gb|EEX07419.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Blast Hits [sprot] PFDB_THENV (sp|B1Y973) Prefoldin subunit beta OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=pfdB PE=3 SV=1
Syncc9605_2553 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT3G25180.2 | Symbols: CYP82G1 | CYP82G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr3:9167889-9169270 REVERSE
Blast Hits [nr] ref|ZP_05789876.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260413780|gb|EEX07076.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Blast Hits [sprot] CUL3_CAEEL (sp|Q17391) Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Syncc9605_0993 Gene product cytochrome c6 (soluble cytochrome f) (cytochrome c553)
Syncc9605_1014 Gene product possible cytochrome c6 (soluble cytochrome f) (cytochrome c553)
Syncc9605_0261 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_0276 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_0815 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_1018 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_2094 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_2171 GO term Molecular Function: hydrogen-exporting ATPase activity, phosphorylative mechanism (GO:0008553)
Syncc9605_2351 GO term Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Syncc9605_0365 Blast Hits [nr] ref|YP_377967.1| 50S ribosomal protein L24 [Synechococcus sp. CC9902] gi|87304028|ref|ZP_01086632.1| Ribosomal protein L24 [Synechococcus sp. WH 5701] gi|116072553|ref|ZP_01469819.1| Ribosomal protein L24 [Synechococcus sp. BL107] gi|109893334|sp|Q3AW82.1|RL24_SYNS9 RecName: Full=50S ribosomal protein L24 gi|78169827|gb|ABB26924.1| LSU ribosomal protein L24P [Synechococcus sp. CC9902] gi|87281526|gb|EAQ73562.1| Ribosomal protein L24 [Synechococcus sp. WH 5701] gi|116064440|gb|EAU70200.1| Ribosomal protein L24 [Synechococcus sp. BL107]
Syncc9605_0509 Blast Hits [nr] ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109] gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Syncc9605_0860 Blast Hits [nr] ref|YP_382087.1| hypothetical protein Syncc9605_1787 [Synechococcus sp. CC9605] gi|78197767|gb|ABB35532.1| hypothetical protein Syncc9605_1787 [Synechococcus sp. CC9605]
Syncc9605_0969 Blast Hits [nr] ref|ZP_05788331.1| acetyltransferase, gnat family [Synechococcus sp. WH 8109] gi|260412235|gb|EEX05531.1| acetyltransferase, gnat family [Synechococcus sp. WH 8109]
Syncc9605_1028 Blast Hits [nr] ref|ZP_05790353.1| lipase family protein [Synechococcus sp. WH 8109] gi|260414257|gb|EEX07553.1| lipase family protein [Synechococcus sp. WH 8109]
Syncc9605_1146 Blast Hits [nr] ref|ZP_05788335.1| potential phosphate regulator, Crp family transcriptional regulatory protein [Synechococcus sp. WH 8109] gi|260412239|gb|EEX05535.1| potential phosphate regulator, Crp family transcriptional regulatory protein [Synechococcus sp. WH 8109]
Syncc9605_1176 Blast Hits [nr] ref|ZP_05788339.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412243|gb|EEX05539.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_1259 Blast Hits [nr] ref|ZP_05789553.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260413457|gb|EEX06753.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_1261 Blast Hits [nr] ref|ZP_05788336.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412240|gb|EEX05536.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_1589 Blast Hits [nr] ref|ZP_06124089.1| packaged DNA stabilization protein gp10 [Providencia rettgeri DSM 1131] gi|291314851|gb|EFE55304.1| packaged DNA stabilization protein gp10 [Providencia rettgeri DSM 1131]
Syncc9605_2032 Blast Hits [nr] ref|ZP_05789649.1| glucose-1-phosphate thymidylyltransferase [Synechococcus sp. WH 8109] gi|260413553|gb|EEX06849.1| glucose-1-phosphate thymidylyltransferase [Synechococcus sp. WH 8109]
Syncc9605_2087 Blast Hits [nr] ref|YP_376597.1| succinate dehydrogenase flavoprotein subunit [Synechococcus sp. CC9902] gi|78168456|gb|ABB25553.1| succinate dehydrogenase subunit A [Synechococcus sp. CC9902]
Syncc9605_2105 Blast Hits [nr] ref|YP_376576.1| hypothetical protein Syncc9902_0564 [Synechococcus sp. CC9902] gi|78168435|gb|ABB25532.1| hypothetical protein Syncc9902_0564 [Synechococcus sp. CC9902]
Syncc9605_2209 Blast Hits [nr] ref|ZP_05788338.1| adenylosuccinate lyase [Synechococcus sp. WH 8109] gi|260412242|gb|EEX05538.1| adenylosuccinate lyase [Synechococcus sp. WH 8109]
Syncc9605_2452 Blast Hits [nr] ref|ZP_05790649.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Synechococcus sp. WH 8109] gi|260414553|gb|EEX07849.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Synechococcus sp. WH 8109]
Syncc9605_2495 Blast Hits [nr] ref|YP_731952.1| transcriptional regulator [Synechococcus sp. CC9311] gi|113955397|ref|YP_731945.1| transcriptional regulator [Synechococcus sp. CC9311] gi|113880451|gb|ABI45409.1| transcriptional regulator [Synechococcus sp. CC9311] gi|113882748|gb|ABI47706.1| transcriptional regulator [Synechococcus sp. CC9311]
Syncc9605_2520 Blast Hits [nr] ref|ZP_05788330.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109] gi|260412234|gb|EEX05530.1| superfamily II DNA/RNA helicase, SNF2 family [Synechococcus sp. WH 8109]
Syncc9605_2559 Blast Hits [nr] ref|ZP_01469180.1| ABC-type sugar transport system periplasmic component-like protein [Synechococcus sp. BL107] gi|116065535|gb|EAU71293.1| ABC-type sugar transport system periplasmic component-like protein [Synechococcus sp. BL107]
Syncc9605_2618 Blast Hits [nr] ref|ZP_01084553.1| putative membrane protein of urea ABC transport system [Synechococcus sp. WH 5701] gi|87283930|gb|EAQ75884.1| putative membrane protein of urea ABC transport system [Synechococcus sp. WH 5701]
Syncc9605_0417 Blast Hits [sprot] Y328_SYNY3 (sp|Q55535) Putative low molecular weight protein-tyrosine-phosphatase slr0328 OS=Synechocystis sp. (strain PCC 6803) GN=slr0328 PE=3 SV=1
Syncc9605_1917 Blast Hits [sprot] FENR_SYNY3 (sp|Q55318) Ferredoxin--NADP reductase OS=Synechocystis sp. (strain PCC 6803) GN=petH PE=1 SV=2
Syncc9605_1948 Blast Hits [sprot] C55L_SYNY3 (sp|P42351) Cytochrome c-553-like OS=Synechocystis sp. (strain PCC 6803) GN=cytM PE=4 SV=1
Syncc9605_2419 Blast Hits [sprot] Y546_SYNY3 (sp|Q55397) Uncharacterized protein sll0546 OS=Synechocystis sp. (strain PCC 6803) GN=sll0546 PE=3 SV=1
Syncc9605_2530 Blast Hits [sprot] DFA1_SYNY3 (sp|Q55393) Diflavin flavoprotein A 1 OS=Synechocystis sp. (strain PCC 6803) GN=dfa1 PE=1 SV=1
Syncc9605_0149 Blast Hits [pln_est] gb|CO165539|CO165539 FLD1_55_F02.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_55_F02_A029 3', mRNA sequence.
Syncc9605_0194 Blast Hits [pln_est] gb|CJ553666|CJ553666 CJ553666 Y.Ogihara unpublished cDNA library Wh_HGCPCDAM Triticum aestivum cDNA clone rwhhg7o01 3', mRNA sequence.
Syncc9605_0212 Blast Hits [pln_est] dbj|DV487376|DV487376 5531_D12_H23RZ_090 Brachypodium distachyon root EST library Brachypodium distachyon cDNA clone 5531_D12_H23, mRNA sequence.
Syncc9605_0249 Blast Hits [pln_est] gb|FE492260|FE492260 CAOT5539.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT5539 5', mRNA sequence.
Syncc9605_0715 Blast Hits [pln_est] dbj|EX055360|EX055360 BR040004 salt-treated whole plant cDNA library KBLS Brassica rapa subsp. pekinensis cDNA clone KBLS-002G04 5', mRNA sequence.
Syncc9605_1161 Blast Hits [pln_est] gb|BG455392|BG455392 NF047E06PL1F1049 Phosphate starved leaf Medicago truncatula cDNA clone NF047E06PL 5', mRNA sequence.
Syncc9605_1529 Blast Hits [pln_est] dbj|EG631289|EG631289 030826AASA005533CT (AASA) Royal Gala 10 DAFB fruit Malus x domestica cDNA clone AASAA00553, mRNA sequence.
Syncc9605_1745 Blast Hits [pln_est] dbj|DR232810|DR232810 12838437 CERES-AN65 Arabidopsis thaliana cDNA clone 1365537 5', mRNA sequence.
Syncc9605_1848 Blast Hits [pln_est] gb|FC515337|FC515337 CBFS5535.rev CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS5535 3', mRNA sequence.
Syncc9605_2260 Blast Hits [pln_est] gb|GE553644|GE553644 CCHT12187.b1_E24.ab1 CCHT Niger Seed Guizotia abyssinica cDNA clone CCHT12187, mRNA sequence.
Syncc9605_2379 Blast Hits [pln_est] dbj|EY855323|EY855323 CG32-C1-003-057-B08-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
Syncc9605_2562 Blast Hits [pln_est] gb|GE553450|GE553450 CCHT12020.b1_H05.ab1 CCHT Niger Seed Guizotia abyssinica cDNA clone CCHT12020, mRNA sequence.
Syncc9605_0034 Blast Hits [TAIR_pep] AT5G15530.1 | Symbols: BCCP2, CAC1-B | BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2); biotin binding | chr5:5038955-5040437 FORWARD
Syncc9605_0044 Blast Hits [TAIR_pep] AT2G13360.2 | Symbols: AGT, AGT1 | AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE); alanine-glyoxylate transaminase/ serine-glyoxylate transaminase/ serine-pyruvate transaminase | chr2:5539417-5540902 REVERSE
Syncc9605_0093 Blast Hits [TAIR_pep] AT2G36990.1 | Symbols: SIGF, SIG6, ATSIG6, SOLDAT8 | SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr2:15537502-15540016 REVERSE
Syncc9605_0409 Blast Hits [TAIR_pep] AT5G17200.1 | Symbols: | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | chr5:5653524-5655336 REVERSE
Syncc9605_0663 Blast Hits [TAIR_pep] AT4G16490.1 | Symbols: | binding | chr4:9293891-9295530 REVERSE
Syncc9605_0992 Blast Hits [TAIR_pep] AT1G63020.1 | Symbols: NRPD1A, POL IVA, SDE4, NRPD1, SMD2 | NRPD1A (NUCLEAR RNA POLYMERASE D 1A); DNA binding / DNA-directed RNA polymerase | chr1:23355329-23361126 REVERSE
Syncc9605_1000 Blast Hits [TAIR_pep] AT2G36990.1 | Symbols: SIGF, SIG6, ATSIG6, SOLDAT8 | SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr2:15537502-15540016 REVERSE
Syncc9605_1047 Blast Hits [TAIR_pep] AT5G63800.1 | Symbols: MUM2, BGAL6 | MUM2 (MUCILAGE-MODIFIED 2); beta-galactosidase | chr5:25530323-25535678 FORWARD
Syncc9605_1114 Blast Hits [TAIR_pep] AT3G16340.1 | Symbols: ATPDR1, PDR1 | PDR1; ATPase, coupled to transmembrane movement of substances | chr3:5539897-5546263 FORWARD
Syncc9605_1122 Blast Hits [TAIR_pep] AT1G68890.1 | Symbols: | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | chr1:25896988-25906553 FORWARD
Syncc9605_1207 Blast Hits [TAIR_pep] AT2G13360.2 | Symbols: AGT, AGT1 | AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE); alanine-glyoxylate transaminase/ serine-glyoxylate transaminase/ serine-pyruvate transaminase | chr2:5539417-5540902 REVERSE
Syncc9605_1231 Blast Hits [TAIR_pep] AT1G58210.1 | Symbols: EMB1674 | EMB1674 (EMBRYO DEFECTIVE 1674) | chr1:21553621-21558056 FORWARD
Syncc9605_1343 Blast Hits [TAIR_pep] AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553 proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). | chr4:10574903-10576355 REVERSE
Syncc9605_1364 Blast Hits [TAIR_pep] AT5G16630.2 | Symbols: ATRAD4, RAD4 | RAD4; damaged DNA binding | chr5:5455325-5459461 FORWARD
Syncc9605_1373 Blast Hits [TAIR_pep] AT1G75530.1 | Symbols: | forkhead-associated domain-containing protein / FHA domain-containing protein | chr1:28359309-28361815 FORWARD
Syncc9605_1476 Blast Hits [TAIR_pep] AT3G01660.1 | Symbols: | methyltransferase | chr3:245532-246432 FORWARD
Syncc9605_1556 Blast Hits [TAIR_pep] AT1G02300.1 | Symbols: | cathepsin B-like cysteine protease, putative | chr1:453288-455376 FORWARD
Syncc9605_1640 Blast Hits [TAIR_pep] AT3G55330.1 | Symbols: PPL1 | PPL1 (PsbP-like protein 1); calcium ion binding | chr3:20514031-20515275 REVERSE
Syncc9605_1724 Blast Hits [TAIR_pep] AT1G55325.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAP240 (InterPro:IPR009401); Has 190 Blast hits to 182 proteins in 65 species: Archae - 0; Bacteria - 45; Metazoa - 113; Fungi - 3; Plants - 23; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:20637594-20646875 FORWARD
Syncc9605_1727 Blast Hits [TAIR_pep] AT1G29530.1 | Symbols: | unknown protein | chr1:10325553-10326651 REVERSE
Syncc9605_2002 Blast Hits [TAIR_pep] AT2G06040.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21900.1); Has 3642 Blast hits to 1885 proteins in 175 species: Archae - 0; Bacteria - 109; Metazoa - 2066; Fungi - 492; Plants - 697; Viruses - 0; Other Eukaryotes - 278 (source: NCBI BLink). | chr2:2352333-2355419 REVERSE
Syncc9605_2251 Blast Hits [TAIR_pep] AT1G16150.1 | Symbols: WAKL4 | WAKL4 (WALL ASSOCIATED KINASE-LIKE 4); kinase | chr1:5532415-5534877 FORWARD
Syncc9605_2353 Blast Hits [TAIR_pep] AT3G13830.1 | Symbols: | F-box family protein | chr3:4553943-4555076 FORWARD
Syncc9605_2437 Blast Hits [TAIR_pep] AT1G68890.1 | Symbols: | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | chr1:25896988-25906553 FORWARD
Syncc9605_2481 Blast Hits [TAIR_pep] AT5G16850.1 | Symbols: ATTERT | ATTERT (TELOMERASE REVERSE TRANSCRIPTASE); telomerase/ telomeric template RNA reverse transcriptase | chr5:5538323-5543444 REVERSE
Syncc9605_2509 Blast Hits [TAIR_pep] AT3G13840.1 | Symbols: | scarecrow transcription factor family protein | chr3:4555305-4556837 REVERSE
Syncc9605_2577 Blast Hits [TAIR_pep] AT1G53050.1 | Symbols: | protein kinase family protein | chr1:19772574-19775531 FORWARD
Syncc9605_2601 Blast Hits [TAIR_pep] AT3G25530.1 | Symbols: GHBDH, ATGHBDH, GLYR1, GR1 | GLYR1 (GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) | chr3:9271949-9273514 REVERSE
Syncc9605_2661 Blast Hits [TAIR_pep] AT3G03260.1 | Symbols: HDG8 | HDG8 (HOMEODOMAIN GLABROUS 8); DNA binding / transcription factor | chr3:755356-759234 REVERSE
Syncc9605_2664 Blast Hits [TAIR_pep] AT2G36990.1 | Symbols: SIGF, SIG6, ATSIG6, SOLDAT8 | SIGF (RNA POLYMERASE SIGMA-SUBUNIT F); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | chr2:15537502-15540016 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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