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Full-text search result: 180 genes by "257" TXT SET

Synechococcus sp. CC9605 (180 genes ) TXT SET

Syncc9605_0016 InterPro IPR002579 Methionine sulphoxide reductase B; Gene3D:G3DSA:2.170.150.20 MsrB
InterPro IPR002579 Methionine sulphoxide reductase B; HMMPfam:PF01641 SelR
InterPro IPR002579 Methionine sulphoxide reductase B; HMMTigr:TIGR00357 MsrB
Syncc9605_0027 InterPro IPR004401 Uncharacterised protein family UPF0133; HMMPfam:PF02575 DUF149
Syncc9605_0037 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0039 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0059 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0073 InterPro IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; HMMPfam:PF02570 CbiC
Syncc9605_0099 InterPro IPR011257 DNA glycosylase; superfamily:SSF48150 DNA_glycsylse
Syncc9605_0114 InterPro IPR019257 Protein of unknown function DUF2260; HMMPfam:PF10017 DUF2260
Syncc9605_0159 InterPro IPR012257 Glycolate oxidase, iron-sulphur subunit; HMMPIR:PIRSF000139 Glc_ox_4Fe-4S
Syncc9605_0160 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0201 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0216 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0228 InterPro NULL NULL; HMMPanther:PTHR22573 PTHR22573
InterPro NULL NULL; HMMPanther:PTHR22573:SF2 PTHR22573:SF2
Syncc9605_0257 Gene product 3-isopropylmalate dehydratase, small subunit
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Biological Process: leucine biosynthetic process (GO:0009098)
GO term Biological Process: metabolic process (GO:0008152)
GO term Cellular Component: 3-isopropylmalate dehydratase complex (GO:0009316)
GO term Molecular Function: 3-isopropylmalate dehydratase activity (GO:0003861)
InterPro IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel; HMMPfam:PF00694 Aconitase_C
InterPro IPR004431 3-isopropylmalate dehydratase, small subunit; HMMTigr:TIGR00171 leuD
InterPro IPR012305 3-isopropylmalate dehydratase, small subunit-like; HMMPanther:PTHR11670:SF2 3-IsopropMal_dehydase_ssu
InterPro IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel; Gene3D:G3DSA:3.20.19.10 Aconitase/3IPM_dehydase_swvl
InterPro IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel; superfamily:SSF52016 Aconitase/3IPM_dehydase_swvl
InterPro IPR015937 Aconitase-like core; HMMPanther:PTHR11670 Aconitase-like_core
Blast Hits [TAIR_pep] AT2G43090.1 | Symbols: | aconitase C-terminal domain-containing protein | chr2:17918957-17919712 FORWARD
Blast Hits [nr] ref|ZP_05790603.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. WH 8109] gi|260414507|gb|EEX07803.1| 3-isopropylmalate dehydratase, small subunit [Synechococcus sp. WH 8109]
Blast Hits [pln_est] dbj|DT626048|DT626048 EST1157972 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA651 5' end, mRNA sequence.
Blast Hits [sprot] LEUD_SYNY3 (sp|P74207) 3-isopropylmalate dehydratase small subunit OS=Synechocystis sp. (strain PCC 6803) GN=leuD PE=3 SV=1
Syncc9605_0271 InterPro IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; HMMPfam:PF02572 CobA_CobO_BtuR
Syncc9605_0277 InterPro NULL NULL; HMMPanther:PTHR22573 PTHR22573
InterPro NULL NULL; HMMPanther:PTHR22573:SF2 PTHR22573:SF2
Syncc9605_0299 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0331 InterPro IPR001280 Photosystem I, PsaA/PsaB; FPrintScan:PR00257 PHOTSYSPSAAB
Syncc9605_0332 InterPro IPR001280 Photosystem I, PsaA/PsaB; FPrintScan:PR00257 PHOTSYSPSAAB
Syncc9605_0336 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0342 InterPro NULL NULL; HMMPanther:PTHR22572 PTHR22572
Syncc9605_0353 InterPro IPR009025 DNA-directed RNA polymerase, RBP11-like; superfamily:SSF55257 RNAP_RBP11-like
Syncc9605_0391 InterPro IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; HMMPfam:PF02572 CobA_CobO_BtuR
Syncc9605_0496 InterPro IPR002482 Peptidoglycan-binding Lysin subgroup; HMMSmart:SM00257 LysM
Syncc9605_0518 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0598 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0603 InterPro IPR003729 Protein of unknown function DUF151; HMMPfam:PF02577 DUF151
Syncc9605_0688 InterPro IPR003723 Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; HMMPfam:PF02571 CbiJ
Syncc9605_0692 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_0713 InterPro IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; HMMPfam:PF02572 CobA_CobO_BtuR
Syncc9605_0724 InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; HMMPfam:PF02578 Cu-oxidase_4
Syncc9605_0620 InterPro NULL NULL; HMMPanther:PTHR22572 SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
Syncc9605_0643 InterPro IPR018257 Ribosomal protein L19, conserved site; PatternScan:PS01015 RIBOSOMAL_L19
Syncc9605_0833 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1003 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1017 InterPro IPR000257 Uroporphyrinogen decarboxylase (URO-D); HMMPfam:PF01208 URO-D
InterPro IPR000257 Uroporphyrinogen decarboxylase (URO-D); PatternScan:PS00906 UROD_1
InterPro IPR000257 Uroporphyrinogen decarboxylase (URO-D); PatternScan:PS00907 UROD_2
Syncc9605_1079 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1096 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1129 InterPro NULL NULL; HMMPanther:PTHR22572 PTHR22572
InterPro NULL NULL; HMMPanther:PTHR22572:SF17 PTHR22572:SF17
Syncc9605_1144 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1162 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1185 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Blast Hits [nr] ref|ZP_05788672.1| secreted pentapeptide repeat protein [Synechococcus sp. WH 8109] gi|260412576|gb|EEX05872.1| secreted pentapeptide repeat protein [Synechococcus sp. WH 8109]
Syncc9605_1255 InterPro NULL NULL; HMMPanther:PTHR22572 PTHR22572
InterPro NULL NULL; HMMPanther:PTHR22572:SF10 PTHR22572:SF10
Syncc9605_1257 Gene product 6-phosphogluconolactonase
Function Carbohydrate transport and metabolism: Carbohydrate transport and metabolism
GO term Biological Process: pentose-phosphate shunt (GO:0006098)
GO term Molecular Function: 6-phosphogluconolactonase activity (GO:0017057)
InterPro IPR005900 6-phosphogluconolactonase; HMMPanther:PTHR11054 Phosphogluconlac
InterPro IPR005900 6-phosphogluconolactonase; HMMTigr:TIGR01198 pgl
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.1360 G3DSA:3.40.50.1360
InterPro NULL NULL; superfamily:SSF100950 SSF100950
Blast Hits [TAIR_pep] AT1G13700.1 | Symbols: | glucosamine/galactosamine-6-phosphate isomerase family protein | chr1:4694475-4695600 REVERSE
Blast Hits [nr] ref|ZP_05789355.1| 6-phosphogluconolactonase [Synechococcus sp. WH 8109] gi|260413259|gb|EEX06555.1| 6-phosphogluconolactonase [Synechococcus sp. WH 8109]
Blast Hits [pln_est] gb|FE707081|FE707081 Pv048C_M13R_E11.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
Blast Hits [sprot] 6PGL_SYNY3 (sp|P74618) 6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3
Syncc9605_1294 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1326 InterPro IPR002482 Peptidoglycan-binding Lysin subgroup; HMMSmart:SM00257 LysM
Syncc9605_1333 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1355 InterPro IPR003726 Homocysteine S-methyltransferase; HMMPfam:PF02574 S-methyl_trans
Syncc9605_1357 InterPro IPR011953 Cobaltochelatase, CobN subunit; HMMTigr:TIGR02257 cobalto_cobN
Syncc9605_1457 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1467 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1489 InterPro IPR011257 DNA glycosylase; superfamily:SSF48150 DNA_glycsylse
Syncc9605_1563 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1588 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1653 InterPro NULL NULL; HMMPfam:PF04257 Exonuc_V_gamma
Syncc9605_1684 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1769 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1795 InterPro IPR002575 Aminoglycoside phosphotransferase; HMMPfam:PF01636 APH
Syncc9605_1809 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1819 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1840 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1990 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2032 InterPro NULL NULL; HMMPanther:PTHR22572 PTHR22572
InterPro NULL NULL; HMMPanther:PTHR22572:SF13 PTHR22572:SF13
Syncc9605_2034 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_1866 InterPro NULL NULL; HMMPanther:PTHR22572 SUGAR-1-PHOSPHATE GUANYL TRANSFERASE
InterPro NULL NULL; HMMPanther:PTHR22572:SF15 MANNOSE-1-PHOSPHATE GUANYLTRANSFERASE
Syncc9605_2058 InterPro IPR009666 Protein of unknown function DUF1257; HMMPfam:PF06868 DUF1257
Syncc9605_2078 InterPro IPR003728 Uncharacterised protein family UPF0090; HMMPfam:PF02576 DUF150
Syncc9605_2101 InterPro IPR002575 Aminoglycoside phosphotransferase; HMMPfam:PF01636 APH
Syncc9605_2232 InterPro IPR022224 Protein of unknown function DUF3750; HMMPfam:PF12570 DUF3750
Syncc9605_2257 Gene product Methionine sulfoxide reductase B
Function Not in COGs: Not in COGs
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Molecular Function: peptide-methionine-(S)-S-oxide reductase activity (GO:0008113)
InterPro IPR002579 Methionine sulphoxide reductase B; Gene3D:G3DSA:2.170.150.20 MsrB
InterPro IPR002579 Methionine sulphoxide reductase B; HMMPfam:PF01641 SelR
InterPro IPR002579 Methionine sulphoxide reductase B; HMMTigr:TIGR00357 MsrB
InterPro IPR011057 Mss4-like; superfamily:SSF51316 Mss4_like
InterPro NULL NULL; HMMPanther:PTHR10173 PTHR10173
Blast Hits [TAIR_pep] AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase | chr1:20036687-20038074 FORWARD
Blast Hits [nr] ref|ZP_05790095.1| methionine-R-sulfoxide reductase [Synechococcus sp. WH 8109] gi|260413999|gb|EEX07295.1| methionine-R-sulfoxide reductase [Synechococcus sp. WH 8109]
Blast Hits [pln_est] gb|CU400847|CU400847 CU400847 LG0ABA Eucalyptus gunnii cDNA, mRNA sequence.
Blast Hits [sprot] MSRB_SYNR3 (sp|A5GQT3) Peptide methionine sulfoxide reductase msrB OS=Synechococcus sp. (strain RCC307) GN=msrB PE=3 SV=1
Syncc9605_2263 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2264 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2297 InterPro NULL NULL; HMMPanther:PTHR22573 PTHR22573
InterPro NULL NULL; HMMPanther:PTHR22573:SF5 PTHR22573:SF5
Syncc9605_2303 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2395 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2404 InterPro NULL NULL; HMMPanther:PTHR22572 PTHR22572
InterPro NULL NULL; HMMPanther:PTHR22572:SF15 PTHR22572:SF15
Syncc9605_2417 InterPro IPR002571 Winged helix-turn-helix transcription repressor, HrcA; HMMPIR:PIRSF005485 HrcA
InterPro IPR002571 Winged helix-turn-helix transcription repressor, HrcA; HMMTigr:TIGR00331 hrcA
Syncc9605_2449 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2273 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2529 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2574 Gene product hypothetical protein
Function General function prediction only: General function prediction only
InterPro IPR014818 Phage/plasmid primase, P4, C-terminal; HMMPfam:PF08706 D5_N
InterPro IPR014818 Phage/plasmid primase, P4, C-terminal; HMMSmart:SM00885 D5_N
Blast Hits [TAIR_pep] AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor | chr5:24308558-24312187 REVERSE
Blast Hits [nr] ref|ZP_01122754.1| hypothetical protein WH7805_11863 [Synechococcus sp. WH 7805] gi|88788456|gb|EAR19611.1| hypothetical protein WH7805_11863 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] dbj|EY902746|EY902746 RR2DM24JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
Blast Hits [sprot] Y3001_SYNP2 (sp|Q52149) Uncharacterized protein SYNPCC7002_B0001 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_B0001 PE=4 SV=2
Syncc9605_2575 Gene product ATPase-like
Function General function prediction only: General function prediction only
InterPro NULL NULL; HMMPfam:PF03288 Pox_D5
Blast Hits [TAIR_pep] AT5G59580.1 | Symbols: UGT76E1 | UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase | chr5:24006239-24007689 REVERSE
Blast Hits [nr] ref|ZP_01122754.1| hypothetical protein WH7805_11863 [Synechococcus sp. WH 7805] gi|88788456|gb|EAR19611.1| hypothetical protein WH7805_11863 [Synechococcus sp. WH 7805]
Blast Hits [sprot] PRIM_BPP4 (sp|P10277) Putative P4-specific DNA primase OS=Enterobacteria phage P4 GN=Alpha PE=1 SV=1
Syncc9605_2576 Gene product hypothetical protein
Function Not in COGs: Not in COGs
InterPro NULL NULL; HMMPanther:PTHR14154 PTHR14154
InterPro NULL NULL; HMMPfam:PF00504 Chloroa_b-bind
InterPro NULL NULL; superfamily:SSF103511 SSF103511
Blast Hits [TAIR_pep] AT1G44575.2 | Symbols: NPQ4, PSBS | NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding | chr1:16871768-16872548 FORWARD
Blast Hits [nr] ref|YP_731501.1| CAB/ELIP/HLIP family protein [Synechococcus sp. CC9311] gi|113882075|gb|ABI47033.1| CAB/ELIP/HLIP family protein [Synechococcus sp. CC9311]
Blast Hits [pln_est] dbj|EC729146|EC729146 MVE00005512 Mesostigma viride Regular library 2 Mesostigma viride cDNA, mRNA sequence.
Blast Hits [sprot] YCF17_CYAPA (sp|P48367) Uncharacterized protein ycf17 OS=Cyanophora paradoxa GN=ycf17 PE=3 SV=1
Syncc9605_2578 Gene product hypothetical protein
Function Energy production and conversion: Energy production and conversion
GO term Molecular Function: electron carrier activity (GO:0009055)
GO term Molecular Function: iron ion binding (GO:0005506)
InterPro IPR001080 3Fe-4S ferredoxin; FPrintScan:PR00352 3FE4SFRDOXIN
InterPro IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ; HMMPanther:PTHR11821 Hsp40/DnaJ_Rel
InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
InterPro NULL NULL; Gene3D:G3DSA:3.30.70.20 G3DSA:3.30.70.20
InterPro NULL NULL; HMMPanther:PTHR11821:SF2 PTHR11821:SF2
InterPro NULL NULL; superfamily:SSF54862 SSF54862
Blast Hits [TAIR_pep] AT2G42750.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:17793404-17795419 FORWARD
Blast Hits [nr] ref|YP_731545.1| 3Fe-4S ferredoxin [Synechococcus sp. CC9311] gi|113882288|gb|ABI47246.1| 3Fe-4S ferredoxin [Synechococcus sp. CC9311]
Blast Hits [pln_est] gb|CJ770641|CJ770641 CJ770641 Ipomoea nil shoot 8-days old seedling Ipomoea nil cDNA clone jmsf40i08 3', mRNA sequence.
Blast Hits [sprot] FER1_DESAF (sp|P00210) Ferredoxin-1 OS=Desulfovibrio africanus GN=fd1 PE=1 SV=3
Syncc9605_2579 Gene product possible phycobilisome rod-core linker polypeptide (L-RC 28.5)
Function Not in COGs: Not in COGs
GO term Biological Process: photosynthesis (GO:0015979)
GO term Cellular Component: phycobilisome (GO:0030089)
InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR001297 Phycobilisome linker domain; HMMPfam:PF00427 PBS_linker_poly
InterPro IPR001297 Phycobilisome linker domain; ProfileScan:PS51445 PBS_LINKER
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
Blast Hits [TAIR_pep] AT2G45670.1 | Symbols: | calcineurin B subunit-related | chr2:18815070-18818382 REVERSE
Blast Hits [nr] ref|YP_377011.1| phycobilisome rod-core linker polypeptide [Synechococcus sp. CC9902] gi|78168870|gb|ABB25967.1| possible phycobilisome rod-core linker polypeptide [Synechococcus sp. CC9902]
Blast Hits [pln_est] gb|GO256426|GO256426 1015-T3 G. okiensis cDNA Library Griffithsia okiensis cDNA 5', mRNA sequence.
Blast Hits [sprot] PYG1_SYNP2 (sp|Q05238) Phycobilisome rod-core linker polypeptide cpcG OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cpcG PE=1 SV=3
Syncc9605_2582 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2620 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2670 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Blast Hits [nr] ref|YP_378300.1| hypothetical protein Syncc9902_2299 [Synechococcus sp. CC9902] gi|78170160|gb|ABB27257.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Syncc9605_2687 InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Syncc9605_2570 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [nr] ref|ZP_05788329.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412233|gb|EEX05529.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_2571 Gene product possible phage integrase family
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT1G55750.1 | Symbols: | transcription factor-related | chr1:20840449-20845135 REVERSE
Blast Hits [nr] ref|NP_897663.1| phage integrase family protein [Synechococcus sp. WH 8102] gi|33639079|emb|CAE08085.1| possible phage integrase family [Synechococcus sp. WH 8102]
Blast Hits [pln_est] gb|CB818590|CB818590 EST 3679 Half-Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone be005a16 3', mRNA sequence.
Blast Hits [sprot] XISA_ANASP (sp|P08862) Excisase A OS=Anabaena sp. (strain PCC 7120) GN=xisA PE=3 SV=3
Syncc9605_2572 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT1G10385.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49830.1); Has 304 Blast hits to 243 proteins in 98 species: Archae - 0; Bacteria - 22; Metazoa - 141; Fungi - 74; Plants - 62; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:3403224-3405856 FORWARD
Blast Hits [nr] ref|NP_896453.1| hypothetical protein SYNW0358 [Synechococcus sp. WH 8102] gi|33638578|emb|CAE06873.1| hypothetical [Synechococcus sp. WH 8102]
Blast Hits [sprot] RECX_PSEE4 (sp|Q1I6B8) Regulatory protein recX OS=Pseudomonas entomophila (strain L48) GN=recX PE=3 SV=1
Syncc9605_2573 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT5G21482.1 | Symbols: CKX7, ATCKX5 | CKX7 (CYTOKININ OXIDASE 7); cytokinin dehydrogenase/ oxidoreductase | chr5:7226842-7230052 FORWARD
Blast Hits [nr] ref|YP_381258.1| hypothetical protein Syncc9605_0941 [Synechococcus sp. CC9605] gi|78196938|gb|ABB34703.1| hypothetical protein Syncc9605_0941 [Synechococcus sp. CC9605]
Blast Hits [sprot] SYC_STAMF (sp|A3DLW5) Cysteinyl-tRNA synthetase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=cysS PE=3 SV=1
Syncc9605_2577 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT1G53050.1 | Symbols: | protein kinase family protein | chr1:19772574-19775531 FORWARD
Blast Hits [nr] ref|ZP_06645921.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304732|gb|EFE45980.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Syncc9605_0136 Blast Hits [nr] ref|YP_003197166.1| hypothetical protein Dret_0286 [Desulfohalobium retbaense DSM 5692] gi|257796651|gb|ACV67588.1| hypothetical protein Dret_0286 [Desulfohalobium retbaense DSM 5692]
Syncc9605_0312 Blast Hits [nr] ref|ZP_05790057.1| radical SAM domain protein [Synechococcus sp. WH 8109] gi|260413961|gb|EEX07257.1| radical SAM domain protein [Synechococcus sp. WH 8109]
Syncc9605_0509 Blast Hits [nr] ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109] gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Syncc9605_0609 Blast Hits [nr] ref|ZP_05788668.1| cytochrome oxidase assembly protein [Synechococcus sp. WH 8109] gi|260412572|gb|EEX05868.1| cytochrome oxidase assembly protein [Synechococcus sp. WH 8109]
Syncc9605_0660 Blast Hits [nr] ref|ZP_05790257.1| glycolate oxidase, subunit GlcD [Synechococcus sp. WH 8109] gi|260414161|gb|EEX07457.1| glycolate oxidase, subunit GlcD [Synechococcus sp. WH 8109]
Syncc9605_1028 Blast Hits [nr] ref|ZP_05790353.1| lipase family protein [Synechococcus sp. WH 8109] gi|260414257|gb|EEX07553.1| lipase family protein [Synechococcus sp. WH 8109]
Syncc9605_1050 Blast Hits [nr] ref|YP_001038901.1| S-layer-like domain-containing protein [Clostridium thermocellum ATCC 27405] gi|125715216|gb|ABN53708.1| S-layer-like domain containing protein [Clostridium thermocellum ATCC 27405]
Syncc9605_1198 Blast Hits [nr] ref|ZP_05788671.1| tRNA 2-selenouridine synthase [Synechococcus sp. WH 8109] gi|260412575|gb|EEX05871.1| tRNA 2-selenouridine synthase [Synechococcus sp. WH 8109]
Syncc9605_1236 Blast Hits [nr] ref|YP_376770.1| hypothetical protein Syncc9902_0758 [Synechococcus sp. CC9902] gi|78168629|gb|ABB25726.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Syncc9605_1237 Blast Hits [nr] ref|YP_001017255.1| hypothetical protein P9303_12421 [Prochlorococcus marinus str. MIT 9303] gi|123963234|gb|ABM77990.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT 9303] gi|225785018|emb|CAX32003.1| Conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313]
Syncc9605_1576 Blast Hits [nr] ref|ZP_05788669.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412573|gb|EEX05869.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_1621 Blast Hits [nr] ref|ZP_05788674.1| arginine decarboxylase [Synechococcus sp. WH 8109] gi|260412578|gb|EEX05874.1| arginine decarboxylase [Synechococcus sp. WH 8109]
Syncc9605_1631 Blast Hits [nr] ref|ZP_05788667.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109] gi|260412571|gb|EEX05867.1| undecaprenyl pyrophosphate synthetase 1 [Synechococcus sp. WH 8109]
Syncc9605_1771 Blast Hits [nr] ref|NP_896962.1| hypothetical protein SYNW0869 [Synechococcus sp. WH 8102] gi|33632572|emb|CAE07384.1| hypothetical [Synechococcus sp. WH 8102]
Syncc9605_1835 Blast Hits [nr] ref|YP_376829.1| hypothetical protein Syncc9902_0819 [Synechococcus sp. CC9902] gi|78168688|gb|ABB25785.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Syncc9605_1843 Blast Hits [nr] ref|YP_376818.1| hypothetical protein Syncc9902_0808 [Synechococcus sp. CC9902] gi|78168677|gb|ABB25774.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Syncc9605_1870 Blast Hits [nr] ref|YP_376795.1| Holliday junction resolvase YqgF [Synechococcus sp. CC9902] gi|146325619|sp|Q3AYS6.1|RUVX_SYNS9 RecName: Full=Putative Holliday junction resolvase gi|78168654|gb|ABB25751.1| Holliday junction resolvase YqgF [Synechococcus sp. CC9902]
Syncc9605_1875 Blast Hits [nr] ref|YP_376790.1| ferric uptake regulator family protein [Synechococcus sp. CC9902] gi|78168649|gb|ABB25746.1| putative ferric uptake regulator, FUR family [Synechococcus sp. CC9902]
Syncc9605_1895 Blast Hits [nr] ref|YP_376775.1| hypothetical protein Syncc9902_0763 [Synechococcus sp. CC9902] gi|78168634|gb|ABB25731.1| hypothetical protein Syncc9902_0763 [Synechococcus sp. CC9902]
Syncc9605_2049 Blast Hits [nr] ref|ZP_05788670.1| alpha/beta hydrolase family protein [Synechococcus sp. WH 8109] gi|260412574|gb|EEX05870.1| alpha/beta hydrolase family protein [Synechococcus sp. WH 8109]
Syncc9605_2134 Blast Hits [nr] ref|YP_003179163.1| hypothetical protein Apar_0136 [Atopobium parvulum DSM 20469] gi|257472453|gb|ACV50572.1| conserved hypothetical protein [Atopobium parvulum DSM 20469]
Syncc9605_2251 Blast Hits [nr] ref|YP_376838.1| hypothetical protein Syncc9902_0828 [Synechococcus sp. CC9902] gi|78168697|gb|ABB25794.1| hypothetical protein Syncc9902_0828 [Synechococcus sp. CC9902]
Syncc9605_2277 Blast Hits [nr] ref|YP_001225720.1| large-conductance mechanosensitive channel [Synechococcus sp. WH 7803] gi|147848872|emb|CAK24423.1| Large-conductance mechanosensitive channel [Synechococcus sp. WH 7803]
Syncc9605_2294 Blast Hits [nr] ref|ZP_05788666.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412570|gb|EEX05866.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_2454 Blast Hits [nr] ref|ZP_05789257.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260413161|gb|EEX06457.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Syncc9605_0101 Blast Hits [sprot] Y257_SYNY3 (sp|P74415) UPF0079 ATP-binding protein sll0257 OS=Synechocystis sp. (strain PCC 6803) GN=sll0257 PE=3 SV=1
Syncc9605_1382 Blast Hits [sprot] KAS1_STRCN (sp|Q02578) Putative polyketide beta-ketoacyl synthase 1 OS=Streptomyces cyaneus GN=curA PE=3 SV=1
Syncc9605_1916 Blast Hits [sprot] CYPC_STRCN (sp|Q02572) Putative polyketide cyclase OS=Streptomyces cyaneus GN=curF PE=4 SV=1
Syncc9605_0087 Blast Hits [pln_est] gb|FE692572|FE692572 Pv016A_M13F_B12.ab1 Phaseolus vulgaris cv Early gallatin Phaseolus vulgaris cDNA, mRNA sequence.
Syncc9605_0389 Blast Hits [pln_est] gb|CK257079|CK257079 EST740716 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCD254 3' end, mRNA sequence.
Syncc9605_0430 Blast Hits [pln_est] gb|FC822570|FC822570 ZMD18032 ZM_D Zostera marina cDNA clone ZMD18032 (5'), mRNA sequence.
Syncc9605_0585 Blast Hits [pln_est] dbj|DR942573|DR942573 EST1134112 Aquilegia cDNA library Aquilegia formosa x Aquilegia pubescens cDNA clone CO1QB73, mRNA sequence.
Syncc9605_0624 Blast Hits [pln_est] gb|CU525725|CU525725 CU525725 WILTP_KZ0ACL Theobroma cacao cDNA clone KZ0ACL3YB19FM1, mRNA sequence.
Syncc9605_0740 Blast Hits [pln_est] gb|CK272575|CK272575 EST718653 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAD607 5' end, mRNA sequence.
Syncc9605_0787 Blast Hits [pln_est] dbj|DN257284|DN257284 Meso06544 Mesostigma vegetative library Mesostigma viride cDNA clone Meso2a42b03.t7, mRNA sequence.
Syncc9605_0989 Blast Hits [pln_est] gb|CF958462|CF958462 6215rsiceb_12577.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5', mRNA sequence.
Syncc9605_1057 Blast Hits [pln_est] gb|BE422257|BE422257 HWM022cB.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp. vulgare cDNA clone HWM022cB.10, mRNA sequence.
Syncc9605_1241 Blast Hits [pln_est] dbj|DC925798|DC925798 DC925798 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp. patens cDNA clone ppaa31g23 3', mRNA sequence.
Syncc9605_1515 Blast Hits [pln_est] gb|FC402573|FC402573 CAYZ25190.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ25190 5', mRNA sequence.
Syncc9605_1567 Blast Hits [pln_est] dbj|EX378257|EX378257 GQ03236.B7_P01 GQ032 - Shoot tip (Normalized library) Picea glauca cDNA clone GQ03236_P01 5', mRNA sequence.
Syncc9605_2067 Blast Hits [pln_est] gb|CV292579|CV292579 aof01-5ms4-c11 Aof01 Asparagus officinalis cDNA clone aof01-5ms4-c11 5', mRNA sequence.
Syncc9605_2231 Blast Hits [pln_est] gb|CA934257|CA934257 MTU3TS.P5.C01 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA sequence.
Syncc9605_2353 Blast Hits [pln_est] gb|CX662572|CX662572 EST 394 Expressed sequences from Barley Hordeum vulgare subsp. vulgare cDNA clone P394 5', mRNA sequence.
Syncc9605_2399 Blast Hits [pln_est] gb|CV245605|CV245605 WS0257.B21_O05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0257_O05 3', mRNA sequence.
Syncc9605_2491 Blast Hits [pln_est] dbj|EX325795|EX325795 GQ02824.B7_H24 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02824_H24 5', mRNA sequence.
Syncc9605_2492 Blast Hits [pln_est] dbj|EX325795|EX325795 GQ02824.B7_H24 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02824_H24 5', mRNA sequence.
Syncc9605_2493 Blast Hits [pln_est] dbj|EX325795|EX325795 GQ02824.B7_H24 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02824_H24 5', mRNA sequence.
Syncc9605_0007 Blast Hits [TAIR_pep] AT2G25730.1 | Symbols: | unknown protein | chr2:10956751-10972729 REVERSE
Syncc9605_0061 Blast Hits [TAIR_pep] AT5G57700.3 | Symbols: | BNR/Asp-box repeat family protein | chr5:23375257-23376943 FORWARD
Syncc9605_0204 Blast Hits [TAIR_pep] ATCG00430.1 | Symbols: PSBG | Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | chrC:49257-49934 REVERSE
Syncc9605_0310 Blast Hits [TAIR_pep] AT1G68660.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); Has 513 Blast hits to 513 proteins in 129 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). | chr1:25778058-25779083 REVERSE
Syncc9605_0333 Blast Hits [TAIR_pep] AT5G64480.1 | Symbols: | unknown protein | chr5:25778202-25778756 FORWARD
Syncc9605_0347 Blast Hits [TAIR_pep] AT3G62910.1 | Symbols: APG3 | APG3 (ALBINO AND PALE GREEN); translation release factor/ translation release factor, codon specific | chr3:23257661-23260386 REVERSE
Syncc9605_0568 Blast Hits [TAIR_pep] AT1G45110.1 | Symbols: | tetrapyrrole methylase family protein | chr1:17052572-17054546 FORWARD
Syncc9605_0591 Blast Hits [TAIR_pep] AT2G25710.2 | Symbols: HCS1 | HCS1 (HOLOCARBOXYLASE SYNTHASE); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic | chr2:10952719-10955061 FORWARD
Syncc9605_0614 Blast Hits [TAIR_pep] AT5G01410.1 | Symbols: PDX1, ATPDX1.3, RSR4, PDX1.3, ATPDX1 | RSR4 (REDUCED SUGAR RESPONSE 4); protein heterodimerization/ protein homodimerization | chr5:172576-173505 REVERSE
Syncc9605_0668 Blast Hits [TAIR_pep] AT3G07130.1 | Symbols: ATPAP15, PAP15 | PAP15 (PURPLE ACID PHOSPHATASE 15); acid phosphatase/ protein serine/threonine phosphatase | chr3:2255763-2257981 REVERSE
Syncc9605_0719 Blast Hits [TAIR_pep] AT5G64260.1 | Symbols: EXL2 | EXL2 (EXORDIUM LIKE 2) | chr5:25703980-25704897 FORWARD
Syncc9605_0749 Blast Hits [TAIR_pep] AT4G12570.1 | Symbols: UPL5 | UPL5 (UBIQUITIN PROTEIN LIGASE 5); acid-amino acid ligase/ binding / ubiquitin-protein ligase | chr4:7445585-7448819 FORWARD
Syncc9605_0882 Blast Hits [TAIR_pep] AT5G03940.1 | Symbols: FFC, 54CP, CPSRP54, SRP54CP | CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT); 7S RNA binding / GTP binding / mRNA binding / signal sequence binding | chr5:1060265-1063257 REVERSE
Syncc9605_1078 Blast Hits [TAIR_pep] AT5G45140.1 | Symbols: NRPC2 | NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding | chr5:18247416-18257713 REVERSE
Syncc9605_1117 Blast Hits [TAIR_pep] AT1G68690.1 | Symbols: | ATP binding / protein kinase/ protein serine/threonine kinase | chr1:25789192-25791886 FORWARD
Syncc9605_1258 Blast Hits [TAIR_pep] AT4G18810.1 | Symbols: | binding / catalytic/ transcription repressor | chr4:10322622-10325735 REVERSE
Syncc9605_1315 Blast Hits [TAIR_pep] AT1G68650.1 | Symbols: | unknown protein | chr1:25775825-25777683 FORWARD
Syncc9605_1340 Blast Hits [TAIR_pep] AT3G21300.1 | Symbols: | RNA methyltransferase family protein | chr3:7493654-7496257 REVERSE
Syncc9605_1358 Blast Hits [TAIR_pep] AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: PPI1 (PROTON PUMP INTERACTOR 1); protein binding (TAIR:AT4G27500.1); Has 53409 Blast hits to 33585 proteins in 1572 species: Archae - 464; Bacteria - 7066; Metazoa - 25076; Fungi - 5173; Plants - 1740; Viruses - 257; Other Eukaryotes - 13633 (source: NCBI BLink). | chr1:7314338-7319246 FORWARD
Syncc9605_1390 Blast Hits [TAIR_pep] AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | ATGCH; 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II | chr5:25718459-25720790 FORWARD
Syncc9605_1393 Blast Hits [TAIR_pep] AT1G68670.1 | Symbols: | myb family transcription factor | chr1:25782344-25783873 FORWARD
Syncc9605_1444 Blast Hits [TAIR_pep] AT1G68660.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); Has 513 Blast hits to 513 proteins in 129 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). | chr1:25778058-25779083 REVERSE
Syncc9605_1531 Blast Hits [TAIR_pep] AT1G68690.1 | Symbols: | ATP binding / protein kinase/ protein serine/threonine kinase | chr1:25789192-25791886 FORWARD
Syncc9605_1532 Blast Hits [TAIR_pep] AT1G60980.1 | Symbols: ATGA20OX4 | ATGA20OX4 (ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 4); gibberellin 20-oxidase | chr1:22452573-22454140 FORWARD
Syncc9605_1534 Blast Hits [TAIR_pep] AT1G74920.1 | Symbols: ALDH10A8 | ALDH10A8; 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase | chr1:28139175-28142573 REVERSE
Syncc9605_1589 Blast Hits [TAIR_pep] AT2G22570.2 | Symbols: ATNIC1, NIC1 | NIC1 (NICOTINAMIDASE 1); catalytic/ nicotinamidase | chr2:9590021-9590846 REVERSE
Syncc9605_1755 Blast Hits [TAIR_pep] AT1G52570.1 | Symbols: PLDALPHA2 | PLDALPHA2 (phosphlipase d alpha 2); phospholipase D | chr1:19583940-19586551 REVERSE
Syncc9605_1820 Blast Hits [TAIR_pep] AT3G27610.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleotidyltransferase (TAIR:AT2G01220.2); Has 367 Blast hits to 361 proteins in 33 species: Archae - 6; Bacteria - 21; Metazoa - 0; Fungi - 3; Plants - 35; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). | chr3:10225729-10228152 REVERSE
Syncc9605_1899 Blast Hits [TAIR_pep] AT5G25752.1 | Symbols: ATRBL11, RBL11 | RBL11 (RHOMBOID-LIKE PROTEIN 11) | chr5:8951503-8953323 REVERSE
Syncc9605_1921 Blast Hits [TAIR_pep] AT5G03370.1 | Symbols: | acylphosphatase family | chr5:825798-827020 REVERSE
Syncc9605_2007 Blast Hits [TAIR_pep] AT5G14740.5 | Symbols: CA2, CA18, BETA CA2 | CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | chr5:4758257-4762315 FORWARD
Syncc9605_2110 Blast Hits [TAIR_pep] AT5G64420.1 | Symbols: | DNA polymerase V family | chr5:25756416-25761122 FORWARD
Syncc9605_2173 Blast Hits [TAIR_pep] AT1G68590.2 | Symbols: | plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative | chr1:25757593-25758169 REVERSE
Syncc9605_2182 Blast Hits [TAIR_pep] AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: PPI1 (PROTON PUMP INTERACTOR 1); protein binding (TAIR:AT4G27500.1); Has 53409 Blast hits to 33585 proteins in 1572 species: Archae - 464; Bacteria - 7066; Metazoa - 25076; Fungi - 5173; Plants - 1740; Viruses - 257; Other Eukaryotes - 13633 (source: NCBI BLink). | chr1:7314338-7319246 FORWARD
Syncc9605_2238 Blast Hits [TAIR_pep] AT4G26660.1 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin-related (InterPro:IPR010544); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55520.2); Has 17522 Blast hits to 11235 proteins in 728 species: Archae - 194; Bacteria - 1012; Metazoa - 10222; Fungi - 1306; Plants - 509; Viruses - 22; Other Eukaryotes - 4257 (source: NCBI BLink). | chr4:13448754-13451814 FORWARD
Syncc9605_2349 Blast Hits [TAIR_pep] AT4G16410.1 | Symbols: | unknown protein | chr4:9262019-9262576 REVERSE
Syncc9605_2360 Blast Hits [TAIR_pep] AT5G18750.1 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:6255177-6257831 FORWARD
Syncc9605_2407 Blast Hits [TAIR_pep] AT3G25750.1 | Symbols: | F-box family protein | chr3:9400955-9402088 FORWARD
Syncc9605_2665 Blast Hits [TAIR_pep] AT5G58560.1 | Symbols: | phosphatidate cytidylyltransferase family protein | chr5:23670513-23672570 FORWARD

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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