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Full-text search result: 137 genes by "176" TXT SET

Synechococcus sp. CC9605 (137 genes ) TXT SET

Syncc9605_0028 InterPro IPR016166 FAD-binding, type 2; superfamily:SSF56176 FAD-binding_2
Syncc9605_0033 InterPro IPR011768 Translation elongation factor P; HMMTigr:TIGR00038 efp
Syncc9605_0038 InterPro IPR000330 SNF2-related; HMMPfam:PF00176 SNF2_N
Syncc9605_0081 InterPro IPR011130 SecA preprotein, cross-linking domain; superfamily:SSF81767 SecA_PP_bd
Syncc9605_0084 InterPro NULL NULL; HMMPanther:PTHR17630 PTHR17630
InterPro NULL NULL; HMMPanther:PTHR17630:SF20 PTHR17630:SF20
Syncc9605_0092 InterPro IPR006667 MgtE magnesium transporter, integral membrane region; HMMPfam:PF01769 MgtE
Syncc9605_0157 InterPro IPR016166 FAD-binding, type 2; superfamily:SSF56176 FAD-binding_2
Syncc9605_0176 Gene product hypothetical protein
Function Not in COGs: Not in COGs
GO term Biological Process: carbohydrate biosynthetic process (GO:0016051)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Molecular Function: sulfotransferase activity (GO:0008146)
InterPro IPR005331 Sulfotransferase; HMMPfam:PF03567 Sulfotransfer_2
Blast Hits [TAIR_pep] AT3G59220.1 | Symbols: PRN, PRN1, ATPIRIN1 | PRN (PIRIN); calmodulin binding | chr3:21894205-21895501 FORWARD
Blast Hits [nr] ref|YP_003690304.1| hypothetical protein DaAHT2_0982 [Desulfurivibrio alkaliphilus AHT2] gi|296924875|gb|ADH85685.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Blast Hits [pln_est] gb|BP859303|BP859303 BP859303 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-40-D14 5', mRNA sequence.
Blast Hits [sprot] CHSTA_XENLA (sp|Q6GNS1) Carbohydrate sulfotransferase 10 OS=Xenopus laevis GN=chst10 PE=2 SV=1
Syncc9605_0329 InterPro IPR021744 Cobalamin synthesis G N-terminal; HMMPfam:PF11760 CbiG_N
Syncc9605_0370 InterPro NULL NULL; HMMPanther:PTHR11760 PTHR11760
InterPro NULL NULL; HMMPanther:PTHR11760:SF10 PTHR11760:SF10
Syncc9605_0385 InterPro IPR003099 Prephenate dehydrogenase; ProfileScan:PS51176 PDH_ADH
Syncc9605_0390 InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Syncc9605_0366 InterPro IPR000218 Ribosomal protein L14b/L23e; HMMPanther:PTHR11761 50S/60S RIBOSOMAL PROTEIN L14/L23
InterPro IPR005745 Ribosomal protein L14, bacterial-type; HMMPanther:PTHR11761:SF3 50S RIBOSOMAL PROTEIN L14
Syncc9605_0520 InterPro IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding; HMMPfam:PF02775 TPP_enzyme_C
Blast Hits [pln_est] dbj|EH717609|EH717609 CNML4230.b1_K01.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNML4230, mRNA sequence.
Syncc9605_0632 InterPro IPR017665 Guanylate kinase, sub-group; HMMTigr:TIGR03263 guanyl_kin
Syncc9605_0660 InterPro IPR016166 FAD-binding, type 2; superfamily:SSF56176 FAD-binding_2
Syncc9605_0710 InterPro IPR002661 Ribosome recycling factor; HMMPfam:PF01765 RRF
Syncc9605_0717 InterPro IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding; HMMPfam:PF02775 TPP_enzyme_C
Syncc9605_0730 InterPro IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal; ProfileScan:PS50989 COA_CT_CTER
Blast Hits [TAIR_pep] AT2G38040.2 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase | chr2:15917612-15920749 FORWARD
Syncc9605_0820 InterPro IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding; HMMPfam:PF02775 TPP_enzyme_C
Syncc9605_0849 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_0855 InterPro IPR016166 FAD-binding, type 2; superfamily:SSF56176 FAD-binding_2
Syncc9605_1007 InterPro IPR004176 Clp, N-terminal; HMMPfam:PF02861 Clp_N
Syncc9605_1122 InterPro IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding; HMMPfam:PF02775 TPP_enzyme_C
Syncc9605_1198 InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Syncc9605_1214 InterPro IPR011765 Peptidase M16, N-terminal; HMMPfam:PF00675 Peptidase_M16
Blast Hits [TAIR_pep] AT4G37510.1 | Symbols: | ribonuclease III family protein | chr4:17626259-17628854 REVERSE
Syncc9605_1215 InterPro IPR011765 Peptidase M16, N-terminal; HMMPfam:PF00675 Peptidase_M16
Syncc9605_1295 InterPro IPR001176 1-aminocyclopropane-1-carboxylate synthase; FPrintScan:PR00753 ACCSYNTHASE
Syncc9605_1448 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_1450 InterPro IPR002658 3-dehydroquinate synthase AroB; HMMPfam:PF01761 DHQ_synthase
Syncc9605_1627 InterPro IPR004176 Clp, N-terminal; HMMPfam:PF02861 Clp_N
Syncc9605_1635 InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Blast Hits [sprot] Y932_SYNPX (sp|Q7U7P9) UPF0176 protein SYNW0932 OS=Synechococcus sp. (strain WH8102) GN=SYNW0932 PE=3 SV=1
Syncc9605_1764 Gene product putative histone deacetylase/AcuC/AphA family protein
Function Not in COGs: Not in COGs
InterPro IPR000286 Histone deacetylase superfamily; FPrintScan:PR01270 HDASUPER
InterPro IPR000286 Histone deacetylase superfamily; Gene3D:G3DSA:3.40.800.20 His_deacetylse
InterPro IPR000286 Histone deacetylase superfamily; HMMPanther:PTHR10625 His_deacetylse
InterPro IPR000286 Histone deacetylase superfamily; HMMPfam:PF00850 Hist_deacetyl
InterPro NULL NULL; HMMPanther:PTHR10625:SF9 PTHR10625:SF9
InterPro NULL NULL; superfamily:SSF52768 SSF52768
Blast Hits [TAIR_pep] AT5G26040.2 | Symbols: HDA2 | HDA2; histone deacetylase | chr5:9099321-9101598 REVERSE
Blast Hits [nr] ref|ZP_05788604.1| histone deacetylase family protein [Synechococcus sp. WH 8109] gi|260412508|gb|EEX05804.1| histone deacetylase family protein [Synechococcus sp. WH 8109]
Blast Hits [pln_est] dbj|EY670764|EY670764 CS00-C1-102-079-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Blast Hits [sprot] Y1628_SYNP2 (sp|P28606) Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1628 PE=3 SV=2
Syncc9605_1765 Gene product conserved hypothetical protein
Function Function unknown: Function unknown
GO term Molecular Function: FMN binding (GO:0010181)
InterPro IPR009002 FMN-binding split barrel, related; superfamily:SSF50475 FMN_binding
InterPro IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; HMMPfam:PF01243 Pyridox_oxidase
InterPro IPR012349 FMN-binding split barrel; Gene3D:G3DSA:2.30.110.10 PNPOx_FMN_bd
Blast Hits [TAIR_pep] AT2G46580.1 | Symbols: | pyridoxine 5'-phosphate oxidase-related | chr2:19129409-19130513 REVERSE
Blast Hits [nr] ref|ZP_05789002.1| pyridoxamine 5'-phosphate oxidase family protein [Synechococcus sp. WH 8109] gi|260412906|gb|EEX06202.1| pyridoxamine 5'-phosphate oxidase family protein [Synechococcus sp. WH 8109]
Blast Hits [pln_est] gb|FE464611|FE464611 CAOS23347.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS23347 5', mRNA sequence.
Blast Hits [sprot] PDXH_AGRRK (sp|B9JAN3) Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pdxH PE=3 SV=1
Syncc9605_1769 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
Blast Hits [TAIR_pep] AT4G09680.2 | Symbols: | unknown protein | chr4:6116819-6118746 FORWARD
Blast Hits [nr] ref|ZP_05789756.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260413660|gb|EEX06956.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Blast Hits [pln_est] gb|CI234637|CI234637 CI234637 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and root of seedlings Oryza sativa Japonica Group cDNA clone 041-M076R-D04 3', mRNA sequence.
Blast Hits [sprot] NSD1_HUMAN (sp|Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Syncc9605_1811 InterPro IPR016166 FAD-binding, type 2; superfamily:SSF56176 FAD-binding_2
Syncc9605_1819 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_1860 InterPro IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal; ProfileScan:PS50980 COA_CT_NTER
Syncc9605_1953 InterPro IPR002176 Crossover junction endodeoxyribonuclease RuvC; FPrintScan:PR00696 RSOLVASERUVC
InterPro IPR002176 Crossover junction endodeoxyribonuclease RuvC; HMMPfam:PF02075 RuvC
Syncc9605_1961 InterPro IPR010802 Protein of unknown function DUF1400, cynaobacterial; HMMPfam:PF07176 DUF1400
Syncc9605_1969 InterPro IPR000175 Sodium:neurotransmitter symporter; FPrintScan:PR00176 NANEUSMPORT
Syncc9605_2007 InterPro IPR001765 Carbonic anhydrase; Gene3D:G3DSA:3.40.1050.10 CO_anhd_prok_pln
InterPro IPR001765 Carbonic anhydrase; HMMPanther:PTHR11002 Carbonic_anhydrase
InterPro IPR001765 Carbonic anhydrase; HMMPfam:PF00484 Pro_CA
InterPro IPR001765 Carbonic anhydrase; superfamily:SSF53056 Prok_plnt_COanhd
Syncc9605_1982 InterPro IPR006196 S1, IF1 type; HMMPfam:PF01176 eIF-1a
Syncc9605_2081 InterPro IPR000178 Initiation factor 2; PatternScan:PS01176 IF2
Syncc9605_2102 InterPro IPR002307 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HMMPanther:PTHR11766 Tyr_tRNA-synt_1b
Syncc9605_2122 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_2176 Gene product putative aminopeptidase P
Function Amino acid transport and metabolism: Amino acid transport and metabolism
GO term Biological Process: cellular process (GO:0009987)
GO term Biological Process: proteolysis (GO:0006508)
GO term Molecular Function: aminopeptidase activity (GO:0004177)
GO term Molecular Function: manganese ion binding (GO:0030145)
GO term Molecular Function: metalloexopeptidase activity (GO:0008235)
InterPro IPR000994 Peptidase M24, structural domain; Gene3D:G3DSA:3.90.230.10 Peptidase_M24_cat_core
InterPro IPR000994 Peptidase M24, structural domain; HMMPanther:PTHR10804 Peptidase_M24_cat_core
InterPro IPR000994 Peptidase M24, structural domain; HMMPfam:PF00557 Peptidase_M24
InterPro IPR000994 Peptidase M24, structural domain; superfamily:SSF55920 Peptidase_M24_cat_core
InterPro IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site; PatternScan:PS00491 PROLINE_PEPTIDASE
InterPro IPR007865 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; HMMPfam:PF05195 AMP_N
InterPro NULL NULL; Gene3D:G3DSA:3.40.350.10 G3DSA:3.40.350.10
InterPro NULL NULL; HMMPanther:PTHR10804:SF18 PTHR10804:SF18
InterPro NULL NULL; superfamily:SSF53092 SSF53092
Blast Hits [TAIR_pep] AT1G09300.1 | Symbols: | metallopeptidase M24 family protein | chr1:3003981-3008131 FORWARD
Blast Hits [nr] ref|ZP_05789500.1| Xaa-Pro aminopeptidase [Synechococcus sp. WH 8109] gi|260413404|gb|EEX06700.1| Xaa-Pro aminopeptidase [Synechococcus sp. WH 8109]
Blast Hits [pln_est] gb|CV290397|CV290397 aof01-13ms3-b10 Aof01 Asparagus officinalis cDNA clone aof01-13ms3-b10 5', mRNA sequence.
Blast Hits [sprot] AMPP_HAEIN (sp|P44881) Xaa-Pro aminopeptidase OS=Haemophilus influenzae GN=pepP PE=3 SV=1
Syncc9605_2183 InterPro IPR021763 Protein of unknown function DUF3326; HMMPfam:PF11805 DUF3326
Syncc9605_2259 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
InterPro IPR011764 Biotin carboxylation domain; ProfileScan:PS50979 BC
Syncc9605_2331 InterPro IPR017673 Putative FeS-containing Cyanobacterial-specific oxidoreductase; HMMTigr:TIGR03279 cyano_FeS_chp
Syncc9605_2351 InterPro IPR001764 Glycoside hydrolase, family 3, N-terminal; Gene3D:G3DSA:3.20.20.300 Glyco_hydro_3_N
InterPro IPR001764 Glycoside hydrolase, family 3, N-terminal; HMMPfam:PF00933 Glyco_hydro_3
Syncc9605_2416 InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Syncc9605_2440 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_2441 InterPro IPR011767 Glutaredoxin active site; PatternScan:PS00195 GLUTAREDOXIN_1
Syncc9605_2474 InterPro IPR004176 Clp, N-terminal; HMMPfam:PF02861 Clp_N
Syncc9605_2520 InterPro IPR000330 SNF2-related; HMMPfam:PF00176 SNF2_N
Syncc9605_2647 InterPro IPR001765 Carbonic anhydrase; Gene3D:G3DSA:3.40.1050.10 CO_anhd_prok_pln
InterPro IPR001765 Carbonic anhydrase; HMMPanther:PTHR11002 Carbonic_anhydrase
InterPro IPR001765 Carbonic anhydrase; HMMPfam:PF00484 Pro_CA
InterPro IPR001765 Carbonic anhydrase; superfamily:SSF53056 Prok_plnt_COanhd
Syncc9605_2688 InterPro IPR011761 ATP-grasp fold; ProfileScan:PS50975 ATP_GRASP
Syncc9605_2694 InterPro IPR010802 Protein of unknown function DUF1400, cynaobacterial; HMMPfam:PF07176 DUF1400
Syncc9605_1176 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT1G59910.1 | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr1:22054167-22057052 REVERSE
Blast Hits [nr] ref|ZP_05788339.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412243|gb|EEX05539.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Blast Hits [sprot] AROB_CLOBA (sp|B2UYK8) 3-dehydroquinate synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=aroB PE=3 SV=1
Syncc9605_1760 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT1G79640.1 | Symbols: | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | chr1:29966913-29971387 REVERSE
Blast Hits [nr] ref|ZP_01470803.1| hypothetical protein RS9916_33862 [Synechococcus sp. RS9916] gi|116068846|gb|EAU74598.1| hypothetical protein RS9916_33862 [Synechococcus sp. RS9916]
Blast Hits [pln_est] gb|GR195744|GR195744 CBPH4929.b1 CBPH Mimulus lewisii floral buds (H) Mimulus lewisii cDNA clone CBPH4929 5', mRNA sequence.
Blast Hits [sprot] PGK_ANAD2 (sp|B8JBD5) Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1
Syncc9605_1761 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT5G55230.1 | Symbols: ATMAP65-1, MAP65-1 | ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding | chr5:22402716-22405182 FORWARD
Blast Hits [nr] ref|YP_382042.1| hypothetical protein Syncc9605_1738 [Synechococcus sp. CC9605] gi|78197722|gb|ABB35487.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Blast Hits [pln_est] dbj|DR967958|DR967958 ZM_BFb0089A18.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
Blast Hits [sprot] CH60_EHRCR (sp|Q2GH98) 60 kDa chaperonin OS=Ehrlichia chaffeensis (strain Arkansas) GN=groL PE=3 SV=1
Syncc9605_1762 Gene product hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT5G56700.1 | Symbols: | F-box protein-related | chr5:22941991-22943378 FORWARD
Blast Hits [nr] ref|YP_380877.1| hypothetical protein Syncc9605_0548 [Synechococcus sp. CC9605] gi|78196557|gb|ABB34322.1| hypothetical protein Syncc9605_0548 [Synechococcus sp. CC9605]
Blast Hits [pln_est] gb|FE621463|FE621463 CBYY3527.g1 CBYY Panicum virgatum Kanlow crown Panicum virgatum cDNA clone CBYY3527 3', mRNA sequence.
Blast Hits [sprot] CARB_BACCL (sp|P46537) Carbamoyl-phosphate synthase pyrimidine-specific large chain OS=Bacillus caldolyticus GN=pyrAB PE=3 SV=1
Syncc9605_1763 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT3G04930.1 | Symbols: | transcription regulator | chr3:1363029-1364399 FORWARD
Blast Hits [nr] ref|NP_897234.1| hypothetical protein SYNW1141 [Synechococcus sp. WH 8102] gi|33632845|emb|CAE07656.1| hypothetical [Synechococcus sp. WH 8102]
Syncc9605_1766 Gene product conserved hypothetical protein
Function Not in COGs: Not in COGs
Blast Hits [TAIR_pep] AT2G40560.1 | Symbols: | protein kinase family protein | chr2:16938705-16939616 REVERSE
Blast Hits [nr] ref|ZP_05788225.1| conserved hypothetical protein [Synechococcus sp. WH 8109] gi|260412129|gb|EEX05425.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
Blast Hits [sprot] SEM6B_HUMAN (sp|Q9H3T3) Semaphorin-6B OS=Homo sapiens GN=SEMA6B PE=1 SV=4
Syncc9605_0280 GO term Molecular Function: tRNA (guanine-N7-)-methyltransferase activity (GO:0008176)
Blast Hits [TAIR_pep] AT5G17660.1 | Symbols: | tRNA (guanine-N7-)-methyltransferase | chr5:5818778-5820811 REVERSE
Syncc9605_0306 GO term Cellular Component: integral to endoplasmic reticulum membrane (GO:0030176)
Syncc9605_0318 GO term Molecular Function: ATP-dependent peptidase activity (GO:0004176)
Syncc9605_0076 Blast Hits [nr] ref|NP_896176.1| photosystem II reaction center protein Z [Synechococcus sp. WH 8102] gi|33337558|gb|AAQ13429.1|AF056046_1 Ycf9 [Synechococcus sp. WH 8102] gi|33632140|emb|CAE06596.1| possible photosystem II protein PsbZ (ycf9) [Synechococcus sp. WH 8102]
Syncc9605_0535 Blast Hits [nr] ref|ZP_01472215.1| hypothetical protein RS9916_30509 [Synechococcus sp. RS9916] gi|116068176|gb|EAU73929.1| hypothetical protein RS9916_30509 [Synechococcus sp. RS9916]
Syncc9605_0548 Blast Hits [nr] ref|YP_382064.1| hypothetical protein Syncc9605_1762 [Synechococcus sp. CC9605] gi|78197744|gb|ABB35509.1| hypothetical protein Syncc9605_1762 [Synechococcus sp. CC9605]
Syncc9605_0776 Blast Hits [nr] ref|YP_381731.1| hypothetical protein Syncc9605_1422 [Synechococcus sp. CC9605] gi|78197411|gb|ABB35176.1| hypothetical protein Syncc9605_1422 [Synechococcus sp. CC9605]
Syncc9605_0955 Blast Hits [nr] ref|YP_382068.1| hypothetical protein Syncc9605_1766 [Synechococcus sp. CC9605] gi|78197748|gb|ABB35513.1| conserved hypothetical protein [Synechococcus sp. CC9605]
Syncc9605_0992 Blast Hits [nr] ref|ZP_05788976.1| YCII-related domain superfamily protein [Synechococcus sp. WH 8109] gi|260412880|gb|EEX06176.1| YCII-related domain superfamily protein [Synechococcus sp. WH 8109]
Syncc9605_1341 Blast Hits [nr] ref|ZP_05790176.1| allophycocyanin alpha-B chain [Synechococcus sp. WH 8109] gi|260414080|gb|EEX07376.1| allophycocyanin alpha-B chain [Synechococcus sp. WH 8109]
Syncc9605_1507 Blast Hits [nr] ref|ZP_05790272.1| superoxide dismutase (Cu-Zn) [Synechococcus sp. WH 8109] gi|260414176|gb|EEX07472.1| superoxide dismutase (Cu-Zn) [Synechococcus sp. WH 8109]
Syncc9605_1731 Blast Hits [nr] ref|XP_001994058.1| GH17698 [Drosophila grimshawi] gi|193895928|gb|EDV94794.1| GH17698 [Drosophila grimshawi]
Syncc9605_1738 Blast Hits [nr] ref|YP_382063.1| hypothetical protein Syncc9605_1761 [Synechococcus sp. CC9605] gi|78197743|gb|ABB35508.1| hypothetical protein Syncc9605_1761 [Synechococcus sp. CC9605]
Syncc9605_1939 Blast Hits [nr] ref|ZP_05789176.1| 2-isopropylmalate synthase [Synechococcus sp. WH 8109] gi|260413080|gb|EEX06376.1| 2-isopropylmalate synthase [Synechococcus sp. WH 8109]
Syncc9605_1981 Blast Hits [nr] ref|ZP_05789976.1| thioredoxin reductase [Synechococcus sp. WH 8109] gi|260413880|gb|EEX07176.1| thioredoxin reductase [Synechococcus sp. WH 8109]
Syncc9605_2002 Blast Hits [nr] ref|ZP_01081387.1| hypothetical protein RS9917_02176 [Synechococcus sp. RS9917] gi|86166842|gb|EAQ68104.1| hypothetical protein RS9917_02176 [Synechococcus sp. RS9917]
Syncc9605_1224 Blast Hits [sprot] PEN3_ADEP3 (sp|Q84176) Penton protein OS=Porcine adenovirus A serotype 3 GN=PIII PE=3 SV=1
Syncc9605_1244 Blast Hits [sprot] YPUF_BACSU (sp|P17617) Uncharacterized protein ypuF OS=Bacillus subtilis GN=ypuF PE=4 SV=1
Syncc9605_1319 Blast Hits [sprot] CBBYC_RALEH (sp|P40119) Protein cbbY, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3
Syncc9605_1359 Blast Hits [sprot] TRPH_HAEIN (sp|P44176) Protein trpH OS=Haemophilus influenzae GN=trpH PE=3 SV=1
Syncc9605_1431 Blast Hits [sprot] THD1_BURM1 (sp|P53607) Threonine dehydratase biosynthetic OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ilvA PE=3 SV=1
Syncc9605_1864 Blast Hits [sprot] KPPR2_RALEH (sp|P19923) Phosphoribulokinase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cfxP PE=1 SV=3
Syncc9605_2075 Blast Hits [sprot] Y1766_SYNY3 (sp|P73639) Uncharacterized protein sll1766 OS=Synechocystis sp. (strain PCC 6803) GN=sll1766 PE=3 SV=1
Syncc9605_0496 Blast Hits [pln_est] gb|CN201766|CN201766 Tor1844 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
Syncc9605_0789 Blast Hits [pln_est] gb|BW988526|BW988526 BW988526 Chamaecyparis obtusa cambium and surrounding tissues Chamaecyparis obtusa cDNA clone CO01769 5', mRNA sequence.
Syncc9605_0950 Blast Hits [pln_est] gb|BI176631|BI176631 EST517576 cSTE Solanum tuberosum cDNA clone cSTE5K10 5' sequence, mRNA sequence.
Syncc9605_1681 Blast Hits [pln_est] dbj|EE176014|EE176014 ZM_BFc0155I15.r ZM_BFc Zea mays cDNA clone ZM_BFc0155I15 5', mRNA sequence.
Syncc9605_1979 Blast Hits [pln_est] dbj|EL441174|EL441174 CHTM17603.b1_F10.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM17603, mRNA sequence.
Syncc9605_1990 Blast Hits [pln_est] gb|CX176527|CX176527 G04_69-55_14.ab1 leaf inoculated with Marssonia pathogen of Populus deltoides Populus deltoides cDNA, mRNA sequence.
Syncc9605_2035 Blast Hits [pln_est] dbj|EY712176|EY712176 CS00-C3-702-016-C09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Syncc9605_2475 Blast Hits [pln_est] gb|CO091764|CO091764 GR__Ea12G21.f GR__Ea Gossypium raimondii cDNA clone GR__Ea12G21 5', mRNA sequence.
Syncc9605_2542 Blast Hits [pln_est] gb|FE441764|FE441764 CAOS10090.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS10090 3', mRNA sequence.
Syncc9605_0122 Blast Hits [TAIR_pep] AT4G17616.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G03100.1); Has 497 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:9819608-9821632 FORWARD
Syncc9605_0174 Blast Hits [TAIR_pep] AT4G37510.1 | Symbols: | ribonuclease III family protein | chr4:17626259-17628854 REVERSE
Syncc9605_0285 Blast Hits [TAIR_pep] AT2G41210.1 | Symbols: PIP5K5 | PIP5K5 (PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5); 1-phosphatidylinositol-4-phosphate 5-kinase | chr2:17173627-17176575 FORWARD
Syncc9605_0412 Blast Hits [TAIR_pep] AT5G53580.1 | Symbols: | aldo/keto reductase family protein | chr5:21765215-21766919 REVERSE
Syncc9605_0418 Blast Hits [TAIR_pep] AT4G37560.1 | Symbols: | formamidase, putative / formamide amidohydrolase, putative | chr4:17646489-17648457 FORWARD
Syncc9605_0567 Blast Hits [TAIR_pep] AT1G77490.1 | Symbols: TAPX | TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE); L-ascorbate peroxidase | chr1:29117688-29120046 FORWARD
Syncc9605_0578 Blast Hits [TAIR_pep] AT1G14345.1 | Symbols: | oxidoreductase | chr1:4899176-4899766 FORWARD
Syncc9605_0582 Blast Hits [TAIR_pep] AT1G47890.1 | Symbols: AtRLP7 | AtRLP7 (Receptor Like Protein 7); kinase/ protein binding | chr1:17643976-17647035 FORWARD
Syncc9605_0593 Blast Hits [TAIR_pep] AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator | chr5:24675540-24678176 FORWARD
Syncc9605_0611 Blast Hits [TAIR_pep] AT3G47740.1 | Symbols: ATATH2, ATH2 | ATATH2; ATPase, coupled to transmembrane movement of substances / transporter | chr3:17600651-17604965 FORWARD
Syncc9605_0683 Blast Hits [TAIR_pep] AT5G22300.1 | Symbols: NIT4 | NIT4 (NITRILASE 4); 3-cyanoalanine hydratase/ cyanoalanine nitrilase/ indole-3-acetonitrile nitrilase/ nitrilase/ nitrile hydratase | chr5:7379401-7381764 FORWARD
Syncc9605_0686 Blast Hits [TAIR_pep] AT2G41520.2 | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr2:17317662-17322705 FORWARD
Syncc9605_0913 Blast Hits [TAIR_pep] AT2G41210.1 | Symbols: PIP5K5 | PIP5K5 (PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5); 1-phosphatidylinositol-4-phosphate 5-kinase | chr2:17173627-17176575 FORWARD
Syncc9605_0993 Blast Hits [TAIR_pep] AT5G45040.1 | Symbols: | cytochrome c6 (ATC6) | chr5:18175566-18176851 REVERSE
Syncc9605_1014 Blast Hits [TAIR_pep] AT5G45040.1 | Symbols: | cytochrome c6 (ATC6) | chr5:18175566-18176851 REVERSE
Syncc9605_1045 Blast Hits [TAIR_pep] AT5G40010.1 | Symbols: AATP1 | AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | chr5:16020218-16021762 REVERSE
Syncc9605_1099 Blast Hits [TAIR_pep] AT5G47910.1 | Symbols: RBOHD, ATRBOHD | RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | chr5:19397585-19401768 FORWARD
Syncc9605_1414 Blast Hits [TAIR_pep] AT5G14880.1 | Symbols: | potassium transporter, putative | chr5:4814244-4817667 FORWARD
Syncc9605_1477 Blast Hits [TAIR_pep] AT4G17600.1 | Symbols: LIL3:1 | LIL3:1; transcription factor | chr4:9803759-9804714 FORWARD
Syncc9605_1604 Blast Hits [TAIR_pep] AT4G32350.1 | Symbols: | unknown protein | chr4:15617634-15620642 FORWARD
Syncc9605_1605 Blast Hits [TAIR_pep] AT3G47790.1 | Symbols: ATATH7, ATH7 | ATATH7; ATPase, coupled to transmembrane movement of substances / transporter | chr3:17629584-17633711 FORWARD
Syncc9605_1618 Blast Hits [TAIR_pep] AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/ two-component response regulator | chr2:333041-334514 FORWARD
Syncc9605_1680 Blast Hits [TAIR_pep] AT4G37608.1 | Symbols: | unknown protein | chr4:17669825-17670429 FORWARD
Syncc9605_1694 Blast Hits [TAIR_pep] AT2G42400.1 | Symbols: VOZ2, ATVOZ2 | VOZ2 (VASCULAR PLANT ONE ZINC FINGER PROTEIN 2); transcription activator | chr2:17654490-17656281 REVERSE
Syncc9605_1756 Blast Hits [TAIR_pep] AT4G17600.1 | Symbols: LIL3:1 | LIL3:1; transcription factor | chr4:9803759-9804714 FORWARD
Syncc9605_1785 Blast Hits [TAIR_pep] AT1G17690.1 | Symbols: | unknown protein | chr1:6082878-6088157 REVERSE
Syncc9605_1813 Blast Hits [TAIR_pep] AT4G08267.1 | Symbols: | unknown protein | chr4:5216854-5217697 FORWARD
Syncc9605_1839 Blast Hits [TAIR_pep] AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/ two-component response regulator | chr2:333041-334514 FORWARD
Syncc9605_1932 Blast Hits [TAIR_pep] AT2G17650.1 | Symbols: | AMP-dependent synthetase and ligase family protein | chr2:7671041-7672936 FORWARD
Syncc9605_1980 Blast Hits [TAIR_pep] AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:7674420-7675575 FORWARD
Syncc9605_2020 Blast Hits [TAIR_pep] AT5G13160.1 | Symbols: PBS1 | PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase | chr5:4176854-4179682 FORWARD
Syncc9605_2215 Blast Hits [TAIR_pep] AT2G36780.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase family protein | chr2:15417618-15419108 REVERSE
Syncc9605_2223 Blast Hits [TAIR_pep] AT5G17620.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 62 Blast hits to 62 proteins in 32 species: Archae - 0; Bacteria - 19; Metazoa - 8; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr5:5805934-5808455 REVERSE
Syncc9605_2229 Blast Hits [TAIR_pep] AT5G43910.1 | Symbols: | pfkB-type carbohydrate kinase family protein | chr5:17667942-17670085 REVERSE
Syncc9605_2250 Blast Hits [TAIR_pep] AT1G30550.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: WW domain-containing protein (TAIR:AT1G45231.2); Has 891 Blast hits to 591 proteins in 275 species: Archae - 68; Bacteria - 248; Metazoa - 211; Fungi - 176; Plants - 45; Viruses - 3; Other Eukaryotes - 140 (source: NCBI BLink). | chr1:10820838-10823641 REVERSE
Syncc9605_2384 Blast Hits [TAIR_pep] AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14); transcription factor/ two-component response regulator | chr2:333041-334514 FORWARD
Syncc9605_2502 Blast Hits [TAIR_pep] AT5G43900.1 | Symbols: MYA2, ATMYA2, XI-2, XI-6 | MYA2 (ARABIDOPSIS MYOSIN 2); GTP-dependent protein binding / Rab GTPase binding / motor | chr5:17657241-17666653 REVERSE
Syncc9605_2551 Blast Hits [TAIR_pep] AT3G17630.1 | Symbols: ATCHX19, CHX19 | ATCHX19 (CATION/H+ EXCHANGER 19); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | chr3:6029201-6031773 FORWARD
Syncc9605_2576 Blast Hits [TAIR_pep] AT1G44575.2 | Symbols: NPQ4, PSBS | NPQ4 (NONPHOTOCHEMICAL QUENCHING); chlorophyll binding / xanthophyll binding | chr1:16871768-16872548 FORWARD
Syncc9605_2612 Blast Hits [TAIR_pep] AT4G37560.1 | Symbols: | formamidase, putative / formamide amidohydrolase, putative | chr4:17646489-17648457 FORWARD

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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