in ?
cyanobase » Prochlorococcus marinus str. NATL2A » genes » search

Full-text search result: 44 genes by "oxidase" TXT SET

Prochlorococcus marinus str. NATL2A (44 genes ) TXT SET

PMN2A_0350 InterPro IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; HMMPfam:PF01243 Pyridox_oxidase
Blast Hits [TAIR_pep] AT2G46580.1 | Symbols: | pyridoxine 5'-phosphate oxidase-related | chr2:19129409-19130513 REVERSE
Blast Hits [sprot] PDXH_DEIRA (sp|Q9RX20) Pyridoxine/pyridoxamine 5'-phosphate oxidase OS=Deinococcus radiodurans GN=pdxH PE=3 SV=1
PMN2A_0489 InterPro IPR002937 Amine oxidase; HMMPfam:PF01593 Amino_oxidase
Blast Hits [TAIR_pep] AT1G57770.1 | Symbols: | amine oxidase family | chr1:21395254-21398135 FORWARD
PMN2A_0546 InterPro IPR016070 Cytochrome c oxidase subunit VIII/photosystem I reaction centre subunit IX; Gene3D:G3DSA:4.10.81.10 no description
PMN2A_0429 Gene product plastoquinol terminal oxidase
InterPro IPR002680 Alternative oxidase; HMMPfam:PF01786 AOX
Blast Hits [TAIR_pep] AT4G22260.1 | Symbols: IM, IM1 | IM (IMMUTANS); alternative oxidase | chr4:11769967-11772350 REVERSE
Blast Hits [sprot] AOX4_ARATH (sp|Q56X52) Alternative oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=AOX4 PE=1 SV=2
PMN2A_0636 InterPro IPR002937 Amine oxidase; HMMPfam:PF01593 Amino_oxidase
PMN2A_0680 InterPro IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase related; HMMPfam:PF02681 DUF212
Blast Hits [TAIR_pep] AT3G21610.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 626 Blast hits to 626 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink). | chr3:7609377-7610601 REVERSE
PMN2A_0869 InterPro IPR006094 FAD linked oxidase, N-terminal; HMMPfam:PF01565 FAD_binding_4
Blast Hits [TAIR_pep] AT5G06580.1 | Symbols: | FAD linked oxidase family protein | chr5:2011486-2016473 REVERSE
Blast Hits [sprot] GLCD_BACSU (sp|P94535) Glycolate oxidase subunit glcD OS=Bacillus subtilis GN=glcD PE=3 SV=1
PMN2A_0877 Gene product coproporphyrinogen III oxidase, anaerobic
GO term Molecular Function: coproporphyrinogen oxidase activity (GO:0004109)
InterPro IPR004559 Putative oxygen-independent coproporphyrinogen III oxidase; HMMTigr:TIGR00539 hemN_rel
Blast Hits [TAIR_pep] AT5G63290.1 | Symbols: | coproporphyrinogen oxidase-related | chr5:25369349-25370894 REVERSE
Blast Hits [nr] ref|YP_001015551.1| putative oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus marinus str. NATL1A] gi|123961504|gb|ABM76287.1| Putative oxygen-independent coproporphyrinogen III oxidase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] Y1917_SYNY3 (sp|P73245) Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Synechocystis sp. (strain PCC 6803) GN=sll1917 PE=3 SV=1
PMN2A_1137 InterPro IPR002937 Amine oxidase; HMMPfam:PF01593 Amino_oxidase
PMN2A_1154 Gene product coproporphyrinogen III oxidase
GO term Molecular Function: coproporphyrinogen oxidase activity (GO:0004109)
InterPro IPR001260 Coproporphyrinogen III oxidase; FPrintScan:PR00073 COPRGNOXDASE
InterPro IPR001260 Coproporphyrinogen III oxidase; Gene3D:G3DSA:3.40.1500.10 Coprogen_oxidas
InterPro IPR001260 Coproporphyrinogen III oxidase; HMMPIR:PIRSF000166 Coproporphyri_ox
InterPro IPR001260 Coproporphyrinogen III oxidase; HMMPanther:PTHR10755 Coprogen_oxidas
InterPro IPR001260 Coproporphyrinogen III oxidase; HMMPfam:PF01218 Coprogen_oxidas
InterPro IPR001260 Coproporphyrinogen III oxidase; superfamily:SSF102886 Coprogen_oxidas
InterPro IPR018375 Coproporphyrinogen III oxidase, conserved site; PatternScan:PS01021 COPROGEN_OXIDASE
Blast Hits [TAIR_pep] AT1G03475.1 | Symbols: LIN2, HEMF1, ATCPO-I | LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase | chr1:869302-871175 REVERSE
Blast Hits [nr] ref|YP_001015848.1| coproporphyrinogen III oxidase [Prochlorococcus marinus str. NATL1A] gi|166217805|sp|A2C524.1|HEM6_PROM1 RecName: Full=Coproporphyrinogen-III oxidase, aerobic; Short=Coproporphyrinogenase; Short=Coprogen oxidase gi|123961801|gb|ABM76584.1| Coproporphyrinogen III oxidase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] HEM6_PROM1 (sp|A2C524) Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus (strain NATL1A) GN=hemF PE=3 SV=1
PMN2A_1209 Gene product glutathione peroxidase
GO term Molecular Function: glutathione peroxidase activity (GO:0004602)
InterPro IPR000889 Glutathione peroxidase; FPrintScan:PR01011 GLUTPROXDASE
InterPro IPR000889 Glutathione peroxidase; HMMPIR:PIRSF000303 Glutathion_perox
InterPro IPR000889 Glutathione peroxidase; HMMPanther:PTHR11592 Glut_peroxidase
InterPro IPR000889 Glutathione peroxidase; HMMPfam:PF00255 GSHPx
InterPro IPR000889 Glutathione peroxidase; PatternScan:PS00460 GLUTATHIONE_PEROXID_1
InterPro IPR000889 Glutathione peroxidase; ProfileScan:PS51355 GLUTATHIONE_PEROXID_3
Blast Hits [TAIR_pep] AT4G31870.1 | Symbols: ATGPX7 | ATGPX7 (glutathione peroxidase 7); glutathione peroxidase | chr4:15410205-15411617 FORWARD
Blast Hits [nr] ref|YP_001015904.1| glutathione peroxidase [Prochlorococcus marinus str. NATL1A] gi|123961857|gb|ABM76640.1| Glutathione peroxidase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] GPO_SYNY3 (sp|P74250) Putative glutathione peroxidase OS=Synechocystis sp. (strain PCC 6803) GN=slr1171 PE=3 SV=1
PMN2A_1348 InterPro IPR006094 FAD linked oxidase, N-terminal; HMMPfam:PF01565 FAD_binding_4
PMN2A_1468 Gene product l-aspartate oxidase
GO term Molecular Function: L-aspartate oxidase activity (GO:0008734)
InterPro IPR005288 L-aspartate oxidase; HMMTigr:TIGR00551 nadB
Blast Hits [TAIR_pep] AT5G14760.1 | Symbols: AO | AO (L-ASPARTATE OXIDASE); L-aspartate oxidase/ electron carrier/ oxidoreductase | chr5:4769133-4772012 FORWARD
Blast Hits [nr] ref|YP_001014000.1| L-aspartate oxidase [Prochlorococcus marinus str. NATL1A] gi|123959952|gb|ABM74735.1| L-aspartate oxidase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] NADB_ANASP (sp|Q8YXJ6) L-aspartate oxidase OS=Anabaena sp. (strain PCC 7120) GN=nadB PE=3 SV=1
PMN2A_1484 InterPro IPR002937 Amine oxidase; HMMPfam:PF01593 Amino_oxidase
PMN2A_1510 InterPro IPR002937 Amine oxidase; HMMPfam:PF01593 Amino_oxidase
PMN2A_1566 GO term Molecular Function: dihydroorotate oxidase activity (GO:0004158)
InterPro IPR012135 Dihydroorotate dehydrogenase, class 1/ 2; HMMPIR:PIRSF000164 DHO_oxidase
PMN2A_1775 Gene product cytochrome c oxidase subunit III
GO term Molecular Function: cytochrome-c oxidase activity (GO:0004129)
InterPro IPR000298 Cytochrome c oxidase, subunit III; HMMPanther:PTHR11403 CytC_oxdse_III
InterPro IPR000298 Cytochrome c oxidase, subunit III; HMMPfam:PF00510 COX3
InterPro IPR000298 Cytochrome c oxidase, subunit III; ProfileScan:PS50253 COX3
InterPro IPR000298 Cytochrome c oxidase, subunit III; superfamily:SSF81452 CytC_oxdse_III
InterPro IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle; Gene3D:G3DSA:1.20.120.80 CytC_oxdse_III_a-bundle
Blast Hits [TAIR_pep] ATMG00730.1 | Symbols: COX3 | Encodes cytochrome c oxidase subunit 3. | chrM:218280-219077 FORWARD
Blast Hits [nr] ref|YP_001014325.1| cytochrome c oxidase, subunit III [Prochlorococcus marinus str. NATL1A] gi|123960277|gb|ABM75060.1| Cytochrome c oxidase, subunit III [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] COX3_SYNY3 (sp|Q06475) Cytochrome c oxidase subunit 3 OS=Synechocystis sp. (strain PCC 6803) GN=ctaE PE=3 SV=2
PMN2A_1776 Gene product cytochrome-c oxidase
GO term Molecular Function: cytochrome-c oxidase activity (GO:0004129)
InterPro IPR000883 Cytochrome c oxidase, subunit I; FPrintScan:PR01165 CYCOXIDASEI
InterPro IPR000883 Cytochrome c oxidase, subunit I; Gene3D:G3DSA:1.20.210.10 COX1
InterPro IPR000883 Cytochrome c oxidase, subunit I; HMMPanther:PTHR10422 COX1
InterPro IPR000883 Cytochrome c oxidase, subunit I; HMMPfam:PF00115 COX1
InterPro IPR000883 Cytochrome c oxidase, subunit I; PatternScan:PS00077 COX1_CUB
InterPro IPR000883 Cytochrome c oxidase, subunit I; ProfileScan:PS50855 COX1
InterPro IPR000883 Cytochrome c oxidase, subunit I; superfamily:SSF81442 COX1
InterPro IPR014241 Cytochrome c oxidase, subunit I bacterial type; HMMTigr:TIGR02891 CtaD_CoxA
Blast Hits [TAIR_pep] ATMG01360.1 | Symbols: COX1 | cytochrome c oxidase subunit 1 | chrM:349830-351413 REVERSE
Blast Hits [nr] ref|YP_001014326.1| cytochrome c oxidase, subunit I [Prochlorococcus marinus str. NATL1A] gi|123960278|gb|ABM75061.1| Cytochrome c oxidase, subunit I [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] COX1_SYNY3 (sp|Q06473) Cytochrome c oxidase subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=ctaD PE=3 SV=2
PMN2A_1777 Gene product putative cytochrome c oxidase, subunit II
GO term Molecular Function: cytochrome-c oxidase activity (GO:0004129)
InterPro IPR002429 Cytochrome c oxidase subunit II C-terminal; FPrintScan:PR01166 CYCOXIDASEII
InterPro IPR002429 Cytochrome c oxidase subunit II C-terminal; HMMPanther:PTHR22888 COX2_C
InterPro IPR002429 Cytochrome c oxidase subunit II C-terminal; HMMPfam:PF00116 COX2
InterPro IPR002429 Cytochrome c oxidase subunit II C-terminal; ProfileScan:PS50857 COX2_CUA
InterPro IPR011759 Cytochrome C oxidase subunit II, transmembrane domain; Gene3D:G3DSA:1.10.287.90 COX2_TM
InterPro IPR011759 Cytochrome C oxidase subunit II, transmembrane domain; HMMPfam:PF02790 COX2_TM
InterPro IPR011759 Cytochrome C oxidase subunit II, transmembrane domain; ProfileScan:PS50999 COX2_TM
InterPro IPR014222 Cytochrome c oxidase, subunit II; HMMTigr:TIGR02866 CoxB
InterPro IPR015964 Cytochrome C oxidase subunit II-like, transmembrane domain; superfamily:SSF81464 Cyt_c_oxidase_II-like_TM
Blast Hits [TAIR_pep] ATMG00160.1 | Symbols: COX2 | cytochrome c oxidase subunit 2 | chrM:40502-42628 REVERSE
Blast Hits [nr] ref|YP_001014327.1| putative cytochrome c oxidase, subunit 2 [Prochlorococcus marinus str. NATL1A] gi|123960279|gb|ABM75062.1| putative cytochrome c oxidase, subunit 2 [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] COX2_THEVL (sp|P98054) Cytochrome c oxidase subunit 2 OS=Thermosynechococcus vulcanus GN=ctaC PE=3 SV=1
PMN2A_1778 Gene product putative cytochrome c oxidase assembly protein
InterPro IPR003780 Cytochrome oxidase assembly; HMMPfam:PF02628 COX15-CtaA
Blast Hits [TAIR_pep] AT5G56090.1 | Symbols: COX15 | COX15 (cytochrome c oxidase 15) | chr5:22714634-22716605 FORWARD
Blast Hits [nr] ref|YP_001014328.1| hypothetical protein NATL1_05011 [Prochlorococcus marinus str. NATL1A] gi|123960280|gb|ABM75063.1| Uncharacterized protein required for cytochrome oxidase assembly [Prochlorococcus marinus str. NATL1A]
PMN2A_1800 InterPro IPR016070 Cytochrome c oxidase subunit VIII/photosystem I reaction centre subunit IX; Gene3D:G3DSA:4.10.81.10 no description
PMN2A_1380 Gene product glycine/D-amino acid oxidase family enzyme
PMN2A_0352 Gene product thioredoxin peroxidase
Blast Hits [nr] ref|YP_001091236.1| thioredoxin peroxidase [Prochlorococcus marinus str. MIT 9301] gi|126543393|gb|ABO17635.1| thioredoxin peroxidase [Prochlorococcus marinus str. MIT 9301]
PMN2A_1172 Gene product (S)-2-hydroxy-acid oxidase
Blast Hits [TAIR_pep] AT4G18360.1 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr4:10146141-10148386 REVERSE
PMN2A_0085 Blast Hits [nr] ref|YP_001014532.1| FAD linked oxidase, N-terminal [Prochlorococcus marinus str. NATL1A] gi|123960484|gb|ABM75267.1| FAD linked oxidase, N-terminal [Prochlorococcus marinus str. NATL1A]
PMN2A_1312 Blast Hits [nr] ref|YP_001016005.1| NAD binding site:D-amino acid oxidase [Prochlorococcus marinus str. NATL1A] gi|123961958|gb|ABM76741.1| NAD binding site:D-amino acid oxidase [Prochlorococcus marinus str. NATL1A]
PMN2A_0818 Blast Hits [sprot] KATG_BURS3 (sp|Q39JF1) Catalase-peroxidase OS=Burkholderia sp. (strain 383) GN=katG PE=3 SV=1
PMN2A_1992 Blast Hits [sprot] PPOX_MYXXA (sp|P56601) Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1
PMN2A_0088 Blast Hits [TAIR_pep] AT5G24155.1 | Symbols: | squalene monooxygenase, putative / squalene epoxidase, putative | chr5:8180118-8181016 REVERSE
PMN2A_0138 Blast Hits [TAIR_pep] AT4G21690.1 | Symbols: ATGA3OX3, GA3OX3 | GA3OX3 (GIBBERELLIN 3-OXIDASE 3); iron ion binding / oxidoreductase | chr4:11527229-11529060 FORWARD
PMN2A_0243 Blast Hits [TAIR_pep] AT3G30180.1 | Symbols: CYP85A2, BR6OX2 | BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2); monooxygenase/ oxygen binding | chr3:11810867-11813509 FORWARD
PMN2A_0479 Blast Hits [TAIR_pep] AT5G60010.1 | Symbols: | FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase | chr5:24160456-24164755 FORWARD
PMN2A_0482 Blast Hits [TAIR_pep] AT2G18140.1 | Symbols: | peroxidase, putative | chr2:7887584-7888878 REVERSE
PMN2A_0547 Blast Hits [TAIR_pep] AT1G01580.1 | Symbols: FRO2, FRD1, ATFRO2 | FRO2 (FERRIC REDUCTION OXIDASE 2); ferric-chelate reductase | chr1:209395-212810 FORWARD
PMN2A_0843 Blast Hits [TAIR_pep] AT1G01590.1 | Symbols: FRO1, ATFRO1 | FRO1 (FERRIC REDUCTION OXIDASE 1); ferric-chelate reductase | chr1:214229-217304 FORWARD
PMN2A_0857 Blast Hits [TAIR_pep] AT5G49970.1 | Symbols: ATPPOX, PDX3 | ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE); pyridoxamine-phosphate oxidase | chr5:20329213-20332900 FORWARD
PMN2A_0929 Blast Hits [TAIR_pep] AT5G14220.1 | Symbols: HEMG2, MEE61, PPO2 | HEMG2; electron carrier/ oxidoreductase/ protoporphyrinogen oxidase | chr5:4583506-4587369 REVERSE
PMN2A_1266 Blast Hits [TAIR_pep] AT4G03205.1 | Symbols: hemf2 | coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative | chr4:1412814-1413765 FORWARD
PMN2A_1406 Blast Hits [TAIR_pep] AT1G75450.1 | Symbols: CKX5, ATCKX5, ATCKX6 | CKX5 (CYTOKININ OXIDASE 5); cytokinin dehydrogenase | chr1:28315248-28318064 REVERSE
PMN2A_1521 Blast Hits [TAIR_pep] AT5G50160.1 | Symbols: ATFRO8, FRO8 | FRO8 (FERRIC REDUCTION OXIDASE 8); ferric-chelate reductase/ oxidoreductase | chr5:20415832-20418582 FORWARD
PMN2A_1611 Blast Hits [TAIR_pep] AT5G51810.1 | Symbols: GA20OX2, AT2353, ATGA20OX2 | GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase | chr5:21055389-21056746 REVERSE
PMN2A_1779 Blast Hits [TAIR_pep] AT2G44520.1 | Symbols: COX10 | COX10 (cytochrome c oxidase 10); prenyltransferase/ protoheme IX farnesyltransferase | chr2:18379660-18381731 FORWARD
PMN2A_2058 Blast Hits [TAIR_pep] AT1G06310.1 | Symbols: ACX6 | ACX6 (ACYL-COA OXIDASE 6); FAD binding / acyl-CoA dehydrogenase/ acyl-CoA oxidase/ electron carrier/ oxidoreductase/ oxidoreductase, acting on the CH-CH group of donors | chr1:1926802-1930227 FORWARD
PMN2A_2138 Blast Hits [TAIR_pep] AT2G31570.1 | Symbols: ATGPX2 | ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase | chr2:13438211-13439775 REVERSE

Word clouds

API

? | +/- | Top
Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (44)
3.846070182

MicrobeBase