cyanobase » Prochlorococcus marinus str. NATL2A » genes » search

Full-text search result: 49 genes by "active" TXT SET

Prochlorococcus marinus str. NATL2A (49 genes ) TXT SET

PMN2A_0003 InterPro IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site; PatternScan:PS00076 PYRIDINE_REDOX_1
PMN2A_0008 InterPro IPR018204 Tryptophan synthase, alpha chain, active site; PatternScan:PS00167 TRP_SYNTHASE_ALPHA
PMN2A_0042 InterPro IPR019756 Peptidase S26A, signal peptidase I, serine active site; PatternScan:PS00501 SPASE_I_1
InterPro IPR019757 Peptidase S26A, signal peptidase I, lysine active site; PatternScan:PS00760 SPASE_I_2
PMN2A_0292 InterPro IPR018215 Peptidase S14, ClpP, active site; PatternScan:PS00381 CLP_PROTEASE_SER
PMN2A_0319 InterPro IPR001555 Phosphoribosylglycinamide formyltransferase, active site; PatternScan:PS00373 GART
PMN2A_0322 InterPro IPR018510 Diaminopimelate epimerase, active site; PatternScan:PS01326 DAP_EPIMERASE
PMN2A_0382 InterPro IPR020861 Triosephosphate isomerase, active site; PatternScan:PS00171 TIM_1
PMN2A_0445 InterPro IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site; PatternScan:PS00071 GAPDH
PMN2A_0642 InterPro IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HMMPfam:PF03740 PdxJ
InterPro IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HMMTigr:TIGR00559 pdxJ
InterPro IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; superfamily:SSF63892 PyrdxlP_synth_PdxJ
PMN2A_0676 InterPro IPR019796 Glucose-6-phosphate dehydrogenase, active site; PatternScan:PS00069 G6P_DEHYDROGENASE
PMN2A_0758 InterPro IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site; PatternScan:PS00573 PYRIDINE_REDOX_2
PMN2A_0821 InterPro IPR001555 Phosphoribosylglycinamide formyltransferase, active site; PatternScan:PS00373 GART
PMN2A_0864 InterPro IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site; PatternScan:PS00076 PYRIDINE_REDOX_1
PMN2A_0899 InterPro IPR018089 Orotidine 5'-phosphate decarboxylase, active site; PatternScan:PS00156 OMPDECASE
PMN2A_0970 InterPro IPR020003 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain, active site; PatternScan:PS00152 ATPASE_ALPHA_BETA
PMN2A_0981 InterPro IPR020003 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain, active site; PatternScan:PS00152 ATPASE_ALPHA_BETA
PMN2A_0989 InterPro IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site; PatternScan:PS00175 PG_MUTASE
PMN2A_0880 InterPro IPR018215 Peptidase S14, ClpP, active site; PatternScan:PS00381 CLP_PROTEASE_SER
InterPro IPR018215 Peptidase S14, ClpP, active site; PatternScan:PS00382 CLP_PROTEASE_HIS
PMN2A_1147 InterPro IPR018129 Phosphoenolpyruvate carboxylase, active site; PatternScan:PS00393 PEPCASE_2
InterPro IPR018129 Phosphoenolpyruvate carboxylase, active site; PatternScan:PS00781 PEPCASE_1
PMN2A_1172 InterPro IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site; PatternScan:PS00557 FMN_HYDROXY_ACID_DH_1
PMN2A_1186 InterPro IPR018201 Beta-ketoacyl synthase, active site; PatternScan:PS00606 B_KETOACYL_SYNTHASE
PMN2A_1251 InterPro IPR020625 Dihydrodipicolinate synthetase, active site; PatternScan:PS00666 DHDPS_2
PMN2A_1254 InterPro IPR018215 Peptidase S14, ClpP, active site; PatternScan:PS00382 CLP_PROTEASE_HIS
PMN2A_1279 InterPro IPR018239 NAD-dependent DNA ligase, active site; PatternScan:PS01056 DNA_LIGASE_N2
PMN2A_1350 InterPro IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site; PatternScan:PS00071 GAPDH
PMN2A_1355 InterPro IPR005255 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HMMPfam:PF04166 PdxA
InterPro IPR005255 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HMMTigr:TIGR00557 pdxA
PMN2A_1547 InterPro IPR011767 Glutaredoxin active site; PatternScan:PS00195 GLUTAREDOXIN_1
PMN2A_1846 InterPro IPR019757 Peptidase S26A, signal peptidase I, lysine active site; PatternScan:PS00760 SPASE_I_2
PMN2A_1847 InterPro IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site; PatternScan:PS00175 PG_MUTASE
PMN2A_1851 InterPro IPR018225 Transaldolase, active site; PatternScan:PS00958 TRANSALDOLASE_2
InterPro IPR018225 Transaldolase, active site; PatternScan:PS01054 TRANSALDOLASE_1
PMN2A_1857 InterPro IPR019772 Ferrochelatase, active site; PatternScan:PS00534 FERROCHELATASE
PMN2A_1839 InterPro IPR018220 Adenylosuccinate synthase, active site; PatternScan:PS00513 ADENYLOSUCCIN_SYN_2
InterPro IPR018220 Adenylosuccinate synthase, active site; PatternScan:PS01266 ADENYLOSUCCIN_SYN_1
PMN2A_1505 Gene product inactive putative metal-dependent protease
PMN2A_1051 GO term Biological Process: enzyme active site formation (GO:0018307)
PMN2A_1432 Blast Hits [nr] ref|YP_001013962.1| esterase/lipase/thioesterase family protein [Prochlorococcus marinus str. NATL1A] gi|123959914|gb|ABM74697.1| Esterase/lipase/thioesterase family active site [Prochlorococcus marinus str. NATL1A]
PMN2A_1319 Blast Hits [sprot] ROC10_DICDI (sp|Q6XHA6) Probable inactive serine/threonine-protein kinase roco10 OS=Dictyostelium discoideum GN=roco10 PE=3 SV=1
PMN2A_0853 Blast Hits [pln_est] gb|GO370737|GO370737 GQ04011.B7P1_L12 GQ040 - Shoot tip - Active growth (Normalized) Picea glauca cDNA clone GQ04011_L12 5', mRNA sequence.
PMN2A_0882 Blast Hits [pln_est] gb|GW402299|GW402299 C102C04R Fragaria x ananassa var. Chandler sustractive red fruit UCO library C1 Fragaria x ananassa cDNA clone C102C04R, mRNA sequence.
PMN2A_1556 Blast Hits [pln_est] gb|GO370371|GO370371 GQ04008.B7P1_G23 GQ040 - Shoot tip - Active growth (Normalized) Picea glauca cDNA clone GQ04008_G23 5', mRNA sequence.
PMN2A_1796 Blast Hits [pln_est] gb|GO368659|GO368659 GQ03816.SP6.r_E18 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03816_E18 3', mRNA sequence.
PMN2A_0184 Blast Hits [TAIR_pep] AT1G80480.1 | Symbols: PTAC17 | PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17) | chr1:30258272-30260570 REVERSE
PMN2A_0435 Blast Hits [TAIR_pep] AT5G41790.1 | Symbols: CIP1 | CIP1 (COP1-INTERACTIVE PROTEIN 1); protein binding | chr5:16727530-16732391 FORWARD
PMN2A_1037 Blast Hits [TAIR_pep] AT1G80480.1 | Symbols: PTAC17 | PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17) | chr1:30258272-30260570 REVERSE
PMN2A_1572 Blast Hits [TAIR_pep] AT3G09210.1 | Symbols: PTAC13 | PTAC13 (PLASTID TRANSCRIPTIONALLY ACTIVE13); transcription elongation regulator | chr3:2825422-2826850 REVERSE
PMN2A_1764 Blast Hits [TAIR_pep] AT1G65260.1 | Symbols: PTAC4 | PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4) | chr1:24236329-24240428 FORWARD
PMN2A_1813 Blast Hits [TAIR_pep] AT5G41790.1 | Symbols: CIP1 | CIP1 (COP1-INTERACTIVE PROTEIN 1); protein binding | chr5:16727530-16732391 FORWARD
PMN2A_1823 Blast Hits [TAIR_pep] AT1G80480.1 | Symbols: PTAC17 | PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17) | chr1:30258272-30260570 REVERSE
PMN2A_1882 Blast Hits [TAIR_pep] AT5G63850.1 | Symbols: AAP4 | AAP4; acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter/ primary active transmembrane transporter | chr5:25551494-25553374 FORWARD
PMN2A_2115 Blast Hits [TAIR_pep] AT1G03982.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6) (TAIR:AT2G20430.1); Has 96 Blast hits to 96 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:1022424-1023136 REVERSE

Word clouds

API

? | +/- | Top
Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
2.182273137

MicrobeBase