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Full-text search result: 8 genes by "TOPOISOMERASE" TXT SET

Prochlorococcus marinus str. NATL2A (8 genes ) TXT SET

PMN2A_0689 GO term Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
GO term Molecular Function: DNA topoisomerase activity (GO:0003916)
InterPro IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal; HMMPfam:PF00521 DNA_topoisoIV
InterPro IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal; HMMSmart:SM00434 TOP4c
InterPro IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; HMMPfam:PF03989 DNA_gyraseA_C
InterPro IPR013757 DNA topoisomerase, type IIA, subunit A, alpha-helical; Gene3D:G3DSA:1.10.268.10 Topo_IIA_A_a
InterPro IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta; Gene3D:G3DSA:3.90.199.10 Topo_IIA_A/C_ab
InterPro IPR013760 DNA topoisomerase, type IIA, central; superfamily:SSF56719 Topo_IIA_cen
Blast Hits [nr] ref|YP_001015345.1| DNA gyrase subunit A [Prochlorococcus marinus str. NATL1A] gi|123961297|gb|ABM76080.1| DNA gyrase/topoisomerase IV, subunit A [Prochlorococcus marinus str. NATL1A]
PMN2A_1213 GO term Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
InterPro IPR000565 DNA topoisomerase, type IIA, subunit B; FPrintScan:PR01159 DNAGYRASEB
InterPro IPR001241 DNA topoisomerase, type IIA, subunit B/N-terminal; FPrintScan:PR00418 TPI2FAMILY
InterPro IPR001241 DNA topoisomerase, type IIA, subunit B/N-terminal; HMMSmart:SM00433 TOP2c
InterPro IPR002288 DNA topoisomerase, type IIA, subunit B, C-terminal; HMMPfam:PF00986 DNA_gyraseB_C
InterPro IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2; HMMPfam:PF00204 DNA_gyraseB
InterPro IPR013759 DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta; Gene3D:G3DSA:3.40.50.670 Topo_IIA_B/N_ab
InterPro IPR013760 DNA topoisomerase, type IIA, central; superfamily:SSF56719 Topo_IIA_cen
InterPro IPR018522 DNA topoisomerase, type IIA, conserved site; PatternScan:PS00177 TOPOISOMERASE_II
Blast Hits [TAIR_pep] AT5G04130.1 | Symbols: | DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative | chr5:1122084-1128031 REVERSE
PMN2A_1332 Gene product DNA topoisomerase IV subunit A
GO term Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity (GO:0003918)
GO term Molecular Function: DNA topoisomerase activity (GO:0003916)
InterPro IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal; HMMPfam:PF00521 DNA_topoisoIV
InterPro IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal; HMMSmart:SM00434 TOP4c
InterPro IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; HMMPfam:PF03989 DNA_gyraseA_C
InterPro IPR013757 DNA topoisomerase, type IIA, subunit A, alpha-helical; Gene3D:G3DSA:1.10.268.10 Topo_IIA_A_a
InterPro IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta; Gene3D:G3DSA:3.90.199.10 Topo_IIA_A/C_ab
InterPro IPR013760 DNA topoisomerase, type IIA, central; superfamily:SSF56719 Topo_IIA_cen
Blast Hits [nr] ref|YP_001013833.1| DNA gyrase/topoisomerase IV, subunit A [Prochlorococcus marinus str. NATL1A] gi|123959785|gb|ABM74568.1| DNA gyrase/topoisomerase IV, subunit A [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] PARC_SYNY3 (sp|P73077) DNA topoisomerase 4 subunit A OS=Synechocystis sp. (strain PCC 6803) GN=parC PE=3 SV=2
PMN2A_1768 Gene product DNA topoisomerase I
GO term Molecular Function: DNA topoisomerase activity (GO:0003916)
GO term Molecular Function: DNA topoisomerase type I activity (GO:0003917)
InterPro IPR000380 DNA topoisomerase, type IA, core; FPrintScan:PR00417 PRTPISMRASEI
InterPro IPR000380 DNA topoisomerase, type IA, core; HMMPanther:PTHR11390 Topo_IA
InterPro IPR000380 DNA topoisomerase, type IA, core; PatternScan:PS00396 TOPOISOMERASE_I_PROK
InterPro IPR000380 DNA topoisomerase, type IA, core; superfamily:SSF56712 Topo_IA_core
InterPro IPR003601 DNA topoisomerase, type IA, domain 2; HMMSmart:SM00436 TOP1Bc
InterPro IPR003602 DNA topoisomerase, type IA, DNA-binding; HMMSmart:SM00437 TOP1Ac
InterPro IPR005733 DNA topoisomerase I, bacterial-type; HMMTigr:TIGR01051 topA_bact
InterPro IPR013497 DNA topoisomerase, type IA, central; HMMPfam:PF01131 Topoisom_bac
InterPro IPR013824 DNA topoisomerase, type IA, central region, subdomain 1; Gene3D:G3DSA:1.10.460.10 Topo_IA_cen_sub1
InterPro IPR013826 DNA topoisomerase, type IA, central region, subdomain 3; Gene3D:G3DSA:1.10.290.10 Topo_IA_cen_sub3
Blast Hits [TAIR_pep] AT4G31210.1 | Symbols: | DNA topoisomerase family protein | chr4:15165280-15172534 FORWARD
Blast Hits [nr] ref|YP_001014318.1| DNA topoisomerase I [Prochlorococcus marinus str. NATL1A] gi|123960270|gb|ABM75053.1| Prokaryotic DNA topoisomerase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] TOP1_SYNE7 (sp|P34185) DNA topoisomerase 1 OS=Synechococcus elongatus (strain PCC 7942) GN=topA PE=3 SV=2
PMN2A_0099 Blast Hits [sprot] TOF1_CHAGB (sp|Q2HBI0) Topoisomerase 1-associated factor 1 OS=Chaetomium globosum GN=TOF1 PE=3 SV=1
PMN2A_0567 Blast Hits [sprot] TOP1_HAEIN (sp|P43012) DNA topoisomerase 1 OS=Haemophilus influenzae GN=topA PE=3 SV=1
PMN2A_0222 Blast Hits [TAIR_pep] AT4G31210.1 | Symbols: | DNA topoisomerase family protein | chr4:15165280-15172534 FORWARD
PMN2A_0402 Blast Hits [TAIR_pep] AT5G55300.1 | Symbols: TOP1ALPHA, TOP1 | TOP1ALPHA (DNA TOPOISOMERASE I ALPHA); DNA topoisomerase type I | chr5:22424837-22429045 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (8)
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