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Full-text search result: 19 genes by "ELONGATION" TXT SET

Prochlorococcus marinus str. NATL2A (19 genes ) TXT SET

PMN2A_0158 Gene product elongation factor Ts
GO term Biological Process: translational elongation (GO:0006414)
GO term Molecular Function: translation elongation factor activity (GO:0003746)
InterPro IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal; HMMPfam:PF00627 UBA
InterPro IPR001816 Translation elongation factor EFTs/EF1B; HMMPanther:PTHR11741 Transl_elong_EFTs/EF1B
InterPro IPR001816 Translation elongation factor EFTs/EF1B; HMMTigr:TIGR00116 tsf
InterPro IPR014039 Translation elongation factor EFTs/EF1B, dimerisation; Gene3D:G3DSA:3.30.479.20 Transl_elong_EFTs/EF1B_dimer
InterPro IPR014039 Translation elongation factor EFTs/EF1B, dimerisation; HMMPfam:PF00889 EF_TS
InterPro IPR014039 Translation elongation factor EFTs/EF1B, dimerisation; superfamily:SSF54713 EF_TS
InterPro IPR018101 Translation elongation factor Ts, conserved site; PatternScan:PS01126 EF_TS_1
InterPro IPR018101 Translation elongation factor Ts, conserved site; PatternScan:PS01127 EF_TS_2
Blast Hits [TAIR_pep] AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARD
Blast Hits [nr] ref|YP_001014613.1| elongation factor Ts [Prochlorococcus marinus str. NATL1A] gi|166221241|sp|A2C1I8.1|EFTS_PROM1 RecName: Full=Elongation factor Ts; Short=EF-Ts gi|123960565|gb|ABM75348.1| putative Elongation factor Ts [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] EFTS_PROM1 (sp|A2C1I8) Elongation factor Ts OS=Prochlorococcus marinus (strain NATL1A) GN=tsf PE=3 SV=1
PMN2A_0166 InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; Gene3D:G3DSA:3.30.70.240 Transl_elong_EFG/EF2_C
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMPfam:PF00679 EFG_C
InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
InterPro IPR009022 Elongation factor G/III/V; superfamily:SSF54980 EFG_III_V
Blast Hits [TAIR_pep] AT5G13650.1 | Symbols: | elongation factor family protein | chr5:4397821-4402364 FORWARD
PMN2A_0095 InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translation proteins
InterPro IPR009022 Elongation factor G/III/V; superfamily:SSF54980 EF-G C-terminal domain-like
InterPro NULL NULL; HMMPanther:PTHR23115:SF13 TRANSLATION ELONGATION FACTOR G
Blast Hits [TAIR_pep] AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | SCO1 (SNOWY COTYLEDON 1); ATP binding / translation elongation factor/ translation factor, nucleic acid binding | chr1:23233622-23236321 REVERSE
PMN2A_1025 InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
PMN2A_1074 Gene product elongation factor Tu
GO term Biological Process: translational elongation (GO:0006414)
GO term Molecular Function: translation elongation factor activity (GO:0003746)
InterPro IPR004160 Translation elongation factor EFTu/EF1A, C-terminal; HMMPfam:PF03143 GTP_EFTU_D3
InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle; HMMPanther:PTHR23115:SF31 Transl_elong_EFTu/EF1A_bac/org
InterPro IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle; HMMTigr:TIGR00485 EF-Tu
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
InterPro IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal; superfamily:SSF50465 Elong_init_C
Blast Hits [TAIR_pep] AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B | ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B); GTP binding / GTPase/ translation elongation factor | chr4:10990036-10991466 FORWARD
Blast Hits [nr] ref|YP_001015769.1| elongation factor Tu [Prochlorococcus marinus str. NATL1A] gi|166222882|sp|A2C4U5.1|EFTU_PROM1 RecName: Full=Elongation factor Tu; Short=EF-Tu gi|123961722|gb|ABM76505.1| Elongation factor Tu [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] EFTU_PROM1 (sp|A2C4U5) Elongation factor Tu OS=Prochlorococcus marinus (strain NATL1A) GN=tuf PE=3 SV=1
PMN2A_1075 Gene product elongation factor G
GO term Biological Process: translational elongation (GO:0006414)
GO term Molecular Function: translation elongation factor activity (GO:0003746)
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; Gene3D:G3DSA:3.30.70.240 Transl_elong_EFG/EF2_C
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMPfam:PF00679 EFG_C
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMSmart:SM00838 EFG_C
InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR004540 Translation elongation factor EFG/EF2; HMMTigr:TIGR00484 EF-G
InterPro IPR005517 Translation elongation factor EFG/EF2, domain IV; HMMPfam:PF03764 EFG_IV
InterPro IPR005517 Translation elongation factor EFG/EF2, domain IV; HMMSmart:SM00889 EFG_IV
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
InterPro IPR009022 Elongation factor G/III/V; superfamily:SSF54980 EFG_III_V
Blast Hits [TAIR_pep] AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | SCO1 (SNOWY COTYLEDON 1); ATP binding / translation elongation factor/ translation factor, nucleic acid binding | chr1:23233622-23236321 REVERSE
Blast Hits [nr] ref|YP_001015770.1| elongation factor G [Prochlorococcus marinus str. NATL1A] gi|166220159|sp|A2C4U6.1|EFG_PROM1 RecName: Full=Elongation factor G; Short=EF-G gi|123961723|gb|ABM76506.1| Elongation factor G [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] EFG_PROM1 (sp|A2C4U6) Elongation factor G OS=Prochlorococcus marinus (strain NATL1A) GN=fusA PE=3 SV=1
PMN2A_1129 InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
PMN2A_1316 InterPro IPR014717 Translation elongation factor EF1B/ribosomal protein S6; Gene3D:G3DSA:3.30.70.60 Transl_elong_EF1B/rib_con
PMN2A_1353 Gene product elongation factor P
GO term Biological Process: translational elongation (GO:0006414)
GO term Molecular Function: translation elongation factor activity (GO:0003746)
InterPro IPR001059 Translation elongation factor P/YeiP, central; HMMPfam:PF01132 EFP
InterPro IPR011768 Translation elongation factor P; HMMTigr:TIGR00038 efp
InterPro IPR013185 Translation elongation factor, KOW-like; HMMPfam:PF08207 EFP_N
InterPro IPR013852 Translation elongation factor P/YeiP, conserved site; PatternScan:PS01275 EFP
InterPro IPR015365 Elongation factor P, C-terminal; HMMPfam:PF09285 Elong-fact-P_C
InterPro IPR015365 Elongation factor P, C-terminal; HMMSmart:SM00841 Elong-fact-P_C
InterPro IPR020599 Translation elongation factor P/YeiP; HMMPIR:PIRSF005901 EF-P
Blast Hits [TAIR_pep] AT3G08740.1 | Symbols: | elongation factor P (EF-P) family protein | chr3:2654788-2656154 REVERSE
Blast Hits [nr] ref|YP_001013854.1| elongation factor P [Prochlorococcus marinus str. NATL1A] gi|166220260|sp|A2BZC9.1|EFP_PROM1 RecName: Full=Elongation factor P; Short=EF-P gi|123959806|gb|ABM74589.1| Elongation factor P (EF-P) [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] EFP_PROM1 (sp|A2BZC9) Elongation factor P OS=Prochlorococcus marinus (strain NATL1A) GN=efp PE=3 SV=1
PMN2A_1754 InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; Gene3D:G3DSA:3.30.70.240 Transl_elong_EFG/EF2_C
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMPfam:PF00679 EFG_C
InterPro IPR000640 Translation elongation factor EFG/EF2, C-terminal; HMMSmart:SM00838 EFG_C
InterPro IPR004161 Translation elongation factor EFTu/EF1A, domain 2; HMMPfam:PF03144 GTP_EFTU_D2
InterPro IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel; superfamily:SSF50447 Translat_factor
InterPro IPR009022 Elongation factor G/III/V; superfamily:SSF54980 EFG_III_V
PMN2A_0448 Gene product possible elongation factor Tu domain 2
PMN2A_1023 Gene product transcription elongation factor NusA
Blast Hits [nr] ref|YP_001015713.1| transcription elongation factor NusA [Prochlorococcus marinus str. NATL1A] gi|123961666|gb|ABM76449.1| N utilization substance protein A [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] NUSA_BACHD (sp|Q9KA74) Transcription elongation protein nusA OS=Bacillus halodurans GN=nusA PE=3 SV=1
PMN2A_1572 GO term Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968)
GO term Molecular Function: transcription elongation regulator activity (GO:0003711)
Blast Hits [TAIR_pep] AT3G09210.1 | Symbols: PTAC13 | PTAC13 (PLASTID TRANSCRIPTIONALLY ACTIVE13); transcription elongation regulator | chr3:2825422-2826850 REVERSE
PMN2A_0459 Blast Hits [sprot] SPT6_NEUCR (sp|Q8NIV6) Transcription elongation factor spt-6 OS=Neurospora crassa GN=spt-6 PE=3 SV=1
PMN2A_0672 Blast Hits [sprot] EFTU_SACEN (sp|A4FPM7) Elongation factor Tu OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tuf PE=3 SV=1
PMN2A_1140 Blast Hits [sprot] EFP_SACD2 (sp|Q21LT5) Elongation factor P OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=efp PE=3 SV=1
PMN2A_1970 Blast Hits [sprot] TEANC_MOUSE (sp|Q3US16) Transcription elongation factor A N-terminal and central domain-containing protein OS=Mus musculus GN=Tceanc PE=2 SV=1
PMN2A_1722 Blast Hits [TAIR_pep] AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | SCO1 (SNOWY COTYLEDON 1); ATP binding / translation elongation factor/ translation factor, nucleic acid binding | chr1:23233622-23236321 REVERSE
PMN2A_2097 Blast Hits [TAIR_pep] AT5G13650.2 | Symbols: | elongation factor family protein | chr5:4397821-4402364 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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