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Full-text search result: 26 genes by "ferredoxin" TXT SET

Prochlorococcus marinus str. NATL2A (26 genes ) TXT SET

PMN2A_0033 InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
PMN2A_0151 Gene product phycocyanobilin:ferredoxin oxidoreductase
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.3 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2804085-2805333 FORWARD
Blast Hits [nr] ref|YP_001014606.1| phycocyanobilin:ferredoxin oxidoreductase [Prochlorococcus marinus str. NATL1A] gi|123960558|gb|ABM75341.1| ferredoxin-dependent biliverdin reductase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] PCYA_PROMM (sp|Q7V7Y8) Phycocyanobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain MIT 9313) GN=pcyA PE=3 SV=1
PMN2A_0281 InterPro IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; superfamily:SSF52922 Transketo_C_like
PMN2A_0300 InterPro IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; superfamily:SSF52922 Transketo_C_like
PMN2A_0228 Gene product ferredoxin, PetF like protein
InterPro IPR001041 Ferredoxin; HMMPfam:PF00111 Fer2
InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR001041 Ferredoxin; superfamily:SSF54292 2Fe-2S ferredoxin-like
InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 no description
Blast Hits [TAIR_pep] AT1G32550.1 | Symbols: | ferredoxin family protein | chr1:11771969-11774117 REVERSE
Blast Hits [nr] ref|YP_001018914.1| ferredoxin, PetF like protein [Prochlorococcus marinus str. MIT 9303] gi|123964893|gb|ABM79649.1| ferredoxin, PetF like protein [Prochlorococcus marinus str. MIT 9303]
Blast Hits [sprot] FER1_NOSMU (sp|P00252) Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2
PMN2A_0599 Gene product ferredoxin
InterPro IPR001041 Ferredoxin; HMMPfam:PF00111 Fer2
InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR001041 Ferredoxin; superfamily:SSF54292 Ferredoxin
InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
Blast Hits [TAIR_pep] AT1G32550.1 | Symbols: | ferredoxin family protein | chr1:11771969-11774117 REVERSE
Blast Hits [sprot] FER2_SYNP6 (sp|P08451) Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petF2 PE=3 SV=2
PMN2A_0675 Gene product ferredoxin-NADP oxidoreductase, PetH
GO term Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324)
InterPro IPR012146 Ferredoxin--NADP reductase; HMMPIR:PIRSF000361 Frd-NADP+_RD
InterPro IPR015701 Ferredoxin Reductase; HMMPanther:PTHR19384:SF1 FRD_Red
InterPro IPR017927 Ferredoxin reductase-type FAD-binding domain; ProfileScan:PS51384 FAD_FR
Blast Hits [TAIR_pep] AT1G20020.3 | Symbols: ATLFNR2 | FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding | chr1:6942851-6944868 FORWARD
Blast Hits [nr] ref|YP_001015330.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str. NATL1A] gi|123961282|gb|ABM76065.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] FENR_SYNY3 (sp|Q55318) Ferredoxin--NADP reductase OS=Synechocystis sp. (strain PCC 6803) GN=petH PE=1 SV=2
PMN2A_0746 InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
PMN2A_0772 InterPro IPR001041 Ferredoxin; HMMPfam:PF00111 Fer2
InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR001041 Ferredoxin; superfamily:SSF54292 Ferredoxin
InterPro IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site; PatternScan:PS00197 2FE2S_FER_1
PMN2A_0841 InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
PMN2A_0924 Gene product ferredoxin (2Fe-2S), plant
InterPro IPR001041 Ferredoxin; HMMPfam:PF00111 Fer2
InterPro IPR001041 Ferredoxin; ProfileScan:PS51085 2FE2S_FER_2
InterPro IPR001041 Ferredoxin; superfamily:SSF54292 Ferredoxin
InterPro IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site; PatternScan:PS00197 2FE2S_FER_1
InterPro IPR010241 Ferredoxin [2Fe-2S], plant; HMMTigr:TIGR02008 fdx_plant
InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
Blast Hits [TAIR_pep] AT2G27510.1 | Symbols: ATFD3 | ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | chr2:11758281-11758748 REVERSE
Blast Hits [nr] ref|YP_001015600.1| ferredoxin [Prochlorococcus marinus str. NATL1A] gi|123961553|gb|ABM76336.1| ferredoxin [Prochlorococcus marinus str. NATL1A]
Blast Hits [pln_est] dbj|EC180496|EC180496 PWE00001412 Prototheca wickerhamii Normalized small Prototheca wickerhamii cDNA similar to ferredoxin, plastid targeted, mRNA sequence.
Blast Hits [sprot] FER_MASLA (sp|P00248) Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2
PMN2A_1007 Gene product ferredoxin
InterPro IPR001080 3Fe-4S ferredoxin; FPrintScan:PR00352 3FE4SFRDOXIN
InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
Blast Hits [sprot] FER1_DESAF (sp|P00210) Ferredoxin-1 OS=Desulfovibrio africanus GN=fd1 PE=1 SV=3
PMN2A_1131 InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
InterPro IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; PatternScan:PS00198 4FE4S_FER_1
Blast Hits [sprot] FER9_METJA (sp|Q57713) Uncharacterized ferredoxin MJ0265 OS=Methanocaldococcus jannaschii GN=MJ0265 PE=3 SV=2
PMN2A_1167 Gene product phycoerythrobilin:ferredoxin oxidoreductase
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.1 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2803665-2805333 FORWARD
Blast Hits [nr] ref|YP_001015862.1| phycoerythrobilin:ferredoxin oxidoreductase [Prochlorococcus marinus str. NATL1A] gi|166219127|sp|A2C538.1|PEBB_PROM1 RecName: Full=Phycoerythrobilin:ferredoxin oxidoreductase gi|123961815|gb|ABM76598.1| phycoerythrobilin:ferredoxin oxidoreductase [Prochlorococcus marinus str. NATL1A]
Blast Hits [pln_est] gb|CO653278|CO653278 Sylvie384K02_CCT27_11 Chondrus crispus thallus Zap Express Library Chondrus crispus cDNA clone Sylvie384K02_CCT27_11 5' similar to phycoerythrobilin:ferredoxin oxidoreductase [Gloeobacter violaceus PCC 7421] with an e-value of 6,00E-50, mRNA sequence.
Blast Hits [sprot] PEBB_PROM1 (sp|A2C538) Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain NATL1A) GN=pebB PE=3 SV=1
PMN2A_1168 Gene product dihydrobiliverdin:ferredoxin oxidoreductase
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.1 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2803665-2805333 FORWARD
Blast Hits [nr] ref|ZP_01473075.1| 15,16 dihydrobiliverdin:ferredoxin oxidoreductase [Synechococcus sp. RS9916] gi|116067131|gb|EAU72886.1| 15,16 dihydrobiliverdin:ferredoxin oxidoreductase [Synechococcus sp. RS9916]
Blast Hits [sprot] PEBA_SYNS9 (sp|Q3AUU5) 15,16-dihydrobiliverdin:ferredoxin oxidoreductase OS=Synechococcus sp. (strain CC9902) GN=pebA PE=3 SV=1
PMN2A_1187 InterPro IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; superfamily:SSF52922 Transketo_C_like
PMN2A_1184 InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
InterPro IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; PatternScan:PS00198 4FE4S_FER_1
InterPro NULL NULL; superfamily:SSF54862 4Fe-4S ferredoxins
PMN2A_1334 InterPro IPR009051 Alpha-helical ferredoxin; superfamily:SSF46548 Helical_ferredxn
InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
InterPro IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; PatternScan:PS00198 4FE4S_FER_1
PMN2A_1526 InterPro IPR017896 4Fe-4S ferredoxin, iron-sulpur binding domain; ProfileScan:PS51379 4FE4S_FER_2
InterPro IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; PatternScan:PS00198 4FE4S_FER_1
PMN2A_1558 InterPro IPR012675 Beta-grasp fold, ferredoxin-type; Gene3D:G3DSA:3.10.20.30 Ferredoxin_fold
PMN2A_0162 Gene product ferredoxin-sulfite reductase
Blast Hits [TAIR_pep] AT5G04590.1 | Symbols: SIR | SIR; sulfite reductase (ferredoxin)/ sulfite reductase | chr5:1319404-1322298 FORWARD
Blast Hits [nr] gb|ABM75352.1| Ferredoxin-sulfite reductase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] SIR_SYNY3 (sp|P72854) Sulfite reductase [ferredoxin] OS=Synechocystis sp. (strain PCC 6803) GN=sir PE=1 SV=1
PMN2A_1078 Gene product glutamate synthase (ferredoxin)
Blast Hits [TAIR_pep] AT5G04140.1 | Symbols: GLU1, GLS1, GLUS, FD-GOGAT | GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) | chr5:1130031-1138186 FORWARD
Blast Hits [nr] ref|YP_001015773.1| ferredoxin-dependent glutamate synthase [Prochlorococcus marinus str. NATL1A] gi|123961726|gb|ABM76509.1| Ferredoxin-dependent glutamate synthase, Fd-GOGAT [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] GLTS_SYNY3 (sp|P55038) Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gltS PE=1 SV=2
PMN2A_1298 Gene product ferredoxin-nitrite reductase
Blast Hits [TAIR_pep] AT2G15620.1 | Symbols: NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming) | chr2:6810552-6812666 FORWARD
Blast Hits [nr] ref|YP_001015991.1| ferredoxin-nitrite reductase [Prochlorococcus marinus str. NATL1A] gi|123961944|gb|ABM76727.1| Ferredoxin--nitrite reductase [Prochlorococcus marinus str. NATL1A]
Blast Hits [sprot] NIR_SYNE7 (sp|P39661) Ferredoxin--nitrite reductase OS=Synechococcus elongatus (strain PCC 7942) GN=nirA PE=3 SV=1
PMN2A_0634 Blast Hits [sprot] MAUN_METFK (sp|Q50428) Methylamine utilization ferredoxin-type protein mauN OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=mauN PE=4 SV=3
PMN2A_2134 Blast Hits [TAIR_pep] AT4G32590.2 | Symbols: | ferredoxin-related | chr4:15721417-15722266 FORWARD
PMN2A_2186 Blast Hits [TAIR_pep] AT5G66190.1 | Symbols: ATLFNR1, FNR1 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis/ electron transporter, transferring electrons within the noncyclic electron transp | chr5:26451203-26453012 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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