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Full-text search result: 25 genes by "Rho" TXT SET

Prochlorococcus marinus str. NATL2A (25 genes ) TXT SET

PMN2A_0136 InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
PMN2A_0485 Gene product membrane serine protease of rhomboid family
InterPro IPR002610 Peptidase S54, rhomboid; HMMPfam:PF01694 Rhomboid
Blast Hits [TAIR_pep] AT1G12750.2 | Symbols: ATRBL6 | ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6) | chr1:4345100-4346688 REVERSE
Blast Hits [sprot] RHBDL_MIMIV (sp|Q5UQ86) Putative rhomboid protein L523 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L523 PE=3 SV=1
PMN2A_0654 Gene product rhodanese-like
InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Blast Hits [TAIR_pep] AT2G40760.1 | Symbols: | rhodanese-like domain-containing protein | chr2:17010050-17011968 FORWARD
PMN2A_0871 InterPro IPR002792 Deoxyribonuclease/rho motif-related TRAM; HMMPfam:PF01938 TRAM
InterPro IPR002792 Deoxyribonuclease/rho motif-related TRAM; ProfileScan:PS50926 TRAM
PMN2A_0878 InterPro IPR002792 Deoxyribonuclease/rho motif-related TRAM; HMMPfam:PF01938 TRAM
InterPro IPR002792 Deoxyribonuclease/rho motif-related TRAM; ProfileScan:PS50926 TRAM
PMN2A_1141 Gene product rhodanese-like
InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
PMN2A_1530 Gene product rhodanese-like
InterPro IPR001763 Rhodanese-like; Gene3D:G3DSA:3.40.250.10 Rhodanese-like
InterPro IPR001763 Rhodanese-like; HMMPfam:PF00581 Rhodanese
InterPro IPR001763 Rhodanese-like; HMMSmart:SM00450 RHOD
InterPro IPR001763 Rhodanese-like; ProfileScan:PS50206 RHODANESE_3
InterPro IPR001763 Rhodanese-like; superfamily:SSF52821 Rhodanese-like
Blast Hits [TAIR_pep] AT5G19370.1 | Symbols: | rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein | chr5:6524247-6526629 REVERSE
Blast Hits [nr] ref|YP_001014066.1| rhodanese-like protein [Prochlorococcus marinus str. NATL1A] gi|123960018|gb|ABM74801.1| Rhodanese-like protein [Prochlorococcus marinus str. NATL1A]
PMN2A_0021 Blast Hits [sprot] COCE_RHOSM (sp|Q9L9D7) Cocaine esterase OS=Rhodococcus sp. (strain MB1 Bresler) GN=cocE PE=1 SV=1
PMN2A_0036 Blast Hits [sprot] RBSA_RHOS4 (sp|Q3J3V9) Ribose import ATP-binding protein RbsA OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rbsA PE=3 SV=1
PMN2A_0396 Blast Hits [sprot] Y2229_RHOS5 (sp|A4WUQ5) UPF0173 metal-dependent hydrolase Rsph17025_2229 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=Rsph17025_2229 PE=3 SV=1
PMN2A_0668 Blast Hits [sprot] AROD_NEIG2 (sp|B4RLX9) 3-dehydroquinate dehydratase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=aroD PE=3 SV=1
PMN2A_0708 Blast Hits [sprot] COMA_NEIGO (sp|P51973) Competence protein comA OS=Neisseria gonorrhoeae GN=comA PE=4 SV=1
PMN2A_0753 Blast Hits [sprot] PNTB_RHORU (sp|P0C188) NAD(P) transhydrogenase subunit beta OS=Rhodospirillum rubrum GN=pntB PE=1 SV=1
PMN2A_0755 Blast Hits [sprot] PNTAA_RHORU (sp|P0C186) NAD(P) transhydrogenase subunit alpha part 1 OS=Rhodospirillum rubrum GN=pntAA PE=1 SV=1
PMN2A_0846 Blast Hits [sprot] BCHH_RHOS4 (sp|Q9RFD5) Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3 SV=1
PMN2A_1002 Blast Hits [sprot] BIOD_RHOP5 (sp|Q07L51) Dethiobiotin synthetase OS=Rhodopseudomonas palustris (strain BisA53) GN=bioD PE=3 SV=1
PMN2A_1063 Blast Hits [sprot] Y819_PYRHO (sp|O58549) Uncharacterized methyltransferase PH0819 OS=Pyrococcus horikoshii GN=PH0819 PE=3 SV=1
PMN2A_1368 Blast Hits [sprot] Y4233_RHOPA (sp|Q02006) Putative potassium channel protein RPA4233 OS=Rhodopseudomonas palustris GN=RPA4233 PE=3 SV=2
PMN2A_1534 Blast Hits [sprot] PUR6_PYRHO (sp|O58058) Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Pyrococcus horikoshii GN=purE PE=3 SV=1
PMN2A_1615 Blast Hits [sprot] SYC_RHOOB (sp|C1BAC4) Cysteinyl-tRNA synthetase OS=Rhodococcus opacus (strain B4) GN=cysS PE=3 SV=1
PMN2A_1672 Blast Hits [sprot] PHEA_RHOVL (sp|Q02036) B-phycoerythrin alpha chain OS=Rhodella violacea GN=cpeA PE=3 SV=1
PMN2A_1837 Blast Hits [sprot] CUTA_PYRHO (sp|O58720) Divalent-cation tolerance protein cutA OS=Pyrococcus horikoshii GN=cutA PE=1 SV=1
PMN2A_1897 Blast Hits [sprot] RGA8_SCHPO (sp|Q09697) Rho-GTPase-activating protein 8 OS=Schizosaccharomyces pombe GN=rga8 PE=1 SV=1
PMN2A_1733 Blast Hits [pln_est] gb|CN131379|CN131379 RHOH1_47_D07.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_47_D07_A002 5', mRNA sequence.
PMN2A_2115 Blast Hits [TAIR_pep] AT1G03982.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6) (TAIR:AT2G20430.1); Has 96 Blast hits to 96 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr1:1022424-1023136 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
1.608692693

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