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Full-text search result: 209 genes by "ratio" TXT SET

Gloeobacter violaceus PCC 7421 (209 genes and 1 mutants) TXT SET

gll2081 Function Photosynthesis and respiration: CO2 fixation
InterPro IPR010220 CO2 hydration; HMMPfam:PF10216 ChpXY
InterPro IPR010220 CO2 hydration; HMMTigr:TIGR01964 chpXY
Blast Hits [nr] ref|YP_002482352.1| CO2 hydration protein [Cyanothece sp. PCC 7425] gi|219863652|gb|ACL43991.1| CO2 hydration protein [Cyanothece sp. PCC 7425]
gll2630 InterPro IPR010220 CO2 hydration; HMMPfam:PF10216 ChpXY
InterPro IPR010220 CO2 hydration; HMMTigr:TIGR01964 chpXY
glr1005 Function Photosynthesis and respiration: CO2 fixation
InterPro IPR010220 CO2 hydration; HMMPfam:PF10216 ChpXY
InterPro IPR010220 CO2 hydration; HMMTigr:TIGR01964 chpXY
glr0079 Function Photosynthesis and respiration: Photosystem II
Blast Hits [TAIR_pep] ATCG00520.1 | Symbols: YCF4 | Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. | chrC:59772-60326 FORWARD
glr0193 Function Photosynthesis and respiration: CO2 fixation
glr0218 Function Photosynthesis and respiration: NADH dehydrogenase
glr0219 Function Photosynthesis and respiration: NADH dehydrogenase
gll0286 Function Photosynthesis and respiration: Photosystem II
gll0307 Function Photosynthesis and respiration: Soluble electron carriers
glr0314 Function Photosynthesis and respiration: Soluble electron carriers
gll0366 Function Photosynthesis and respiration: Soluble electron carriers
gsl0511 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr0515 Function Photosynthesis and respiration: ATP synthase
gll0525 Function Photosynthesis and respiration: NADH dehydrogenase
gll0652 Function Photosynthesis and respiration: NADH dehydrogenase
gll0653 Function Photosynthesis and respiration: NADH dehydrogenase
gll0654 Function Photosynthesis and respiration: NADH dehydrogenase
glr0715 Function Photosynthesis and respiration: Photosystem II
glr0739 Function Photosynthesis and respiration: Respiratory terminal oxidases
glr0740 Function Photosynthesis and respiration: Respiratory terminal oxidases
GO term Biological Process: aerobic respiration (GO:0009060)
glr0748 Function Photosynthesis and respiration: NADH dehydrogenase
glr0749 Function Photosynthesis and respiration: NADH dehydrogenase
glr0750 Function Photosynthesis and respiration: NADH dehydrogenase
glr0779 Function Photosynthesis and respiration: Photosystem II
glr0854 Function Photosynthesis and respiration: Soluble electron carriers
gsr0856 Function Photosynthesis and respiration: Photosystem II
gsr0857 Function Photosynthesis and respiration: Photosystem II
gsr0858 Function Photosynthesis and respiration: Photosystem II
gsr0859 Function Photosynthesis and respiration: Photosystem II
gsl0928 Function Photosynthesis and respiration: Photosystem II
glr0950 Function Photosynthesis and respiration: Phycobilisome
gll0981 Function Photosynthesis and respiration: Phycobilisome
glr1003 Function Photosynthesis and respiration: NADH dehydrogenase
glr1004 Function Photosynthesis and respiration: NADH dehydrogenase
glr1041 Function Photosynthesis and respiration: Photosystem II
gll1171 Function Photosynthesis and respiration: NADH dehydrogenase
glr1181 Function Photosynthesis and respiration: Phycobilisome
glr1184 Function Photosynthesis and respiration: Phycobilisome
glr1185 Function Photosynthesis and respiration: Phycobilisome
glr1186 Function Photosynthesis and respiration: Phycobilisome
gll1187 Function Photosynthesis and respiration: Respiratory terminal oxidases
gll1188 Function Photosynthesis and respiration: Respiratory terminal oxidases
gll1189 Function Photosynthesis and respiration: Phycobilisome
gll1190 Function Photosynthesis and respiration: Phycobilisome
glr1192 Function Photosynthesis and respiration: Phycobilisome
glr1193 Function Photosynthesis and respiration: Phycobilisome
gll1196 Function Photosynthesis and respiration: Photosystem II
gll1197 Function Photosynthesis and respiration: Photosystem II
glr1245 Function Photosynthesis and respiration: Phycobilisome
glr1246 Function Photosynthesis and respiration: Phycobilisome
glr1247 Function Photosynthesis and respiration: Phycobilisome
gsr1248 Function Photosynthesis and respiration: Phycobilisome
gll1254 Function Photosynthesis and respiration: Phycobilisome
gll1255 Function Photosynthesis and respiration: Phycobilisome
glr1257 Function Photosynthesis and respiration: Phycobilisome
glr1260 Function Photosynthesis and respiration: Soluble electron carriers
glr1261 Function Photosynthesis and respiration: Soluble electron carriers
glr1262 Function Photosynthesis and respiration: Phycobilisome
glr1263 Function Photosynthesis and respiration: Phycobilisome
glr1264 Function Photosynthesis and respiration: Phycobilisome
glr1265 Function Photosynthesis and respiration: Phycobilisome
glr1268 Function Photosynthesis and respiration: Phycobilisome
glr1269 Function Photosynthesis and respiration: Phycobilisome
glr1342 Function Photosynthesis and respiration: Soluble electron carriers
gll1440 Function Photosynthesis and respiration: Photosystem II
gsr1485 Function Photosynthesis and respiration: Soluble electron carriers
gll1521 Function Photosynthesis and respiration: Soluble electron carriers
gsr1544 Function Photosynthesis and respiration: Photosystem II
gll1575 Function Photosynthesis and respiration: Phycobilisome
gll1584 Function Photosynthesis and respiration: NADH dehydrogenase
glr1706 Function Photosynthesis and respiration: Photosystem II
glr1741 Function Photosynthesis and respiration: CO2 fixation
gll1869 Function Photosynthesis and respiration: Cytochrome b6/f complex
gll1870 Function Photosynthesis and respiration: Cytochrome b6/f complex
gsr1874 Function Photosynthesis and respiration: Photosystem II
glr1906 Function Photosynthesis and respiration: Photosystem II
gll1918 Function Photosynthesis and respiration: Cytochrome b6/f complex
gll1919 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr1930 Function Photosynthesis and respiration: Phycobilisome
gll1980 Function Photosynthesis and respiration: Soluble electron carriers
gll2082 Function Photosynthesis and respiration: NADH dehydrogenase
gll2083 Function Photosynthesis and respiration: NADH dehydrogenase
gll2091 Function Photosynthesis and respiration: CO2 fixation
gll2092 Function Photosynthesis and respiration: CO2 fixation
gll2093 Function Photosynthesis and respiration: CO2 fixation
gll2094 Function Photosynthesis and respiration: CO2 fixation
gll2095 Function Photosynthesis and respiration: CO2 fixation
gll2096 Function Photosynthesis and respiration: CO2 fixation
gll2122 Function Photosynthesis and respiration: CO2 fixation
gll2162 Function Photosynthesis and respiration: Respiratory terminal oxidases
gll2163 Function Photosynthesis and respiration: Respiratory terminal oxidases
GO term Biological Process: aerobic respiration (GO:0009060)
gll2164 Function Photosynthesis and respiration: Respiratory terminal oxidases
glr2166 Function Photosynthesis and respiration: Respiratory terminal oxidases
glr2234 Function Photosynthesis and respiration: Phycobilisome
glr2236 Function Photosynthesis and respiration: Photosystem I
glr2276 Function Photosynthesis and respiration: Soluble electron carriers
glr2296 Function Photosynthesis and respiration: CO2 fixation
glr2322 Function Photosynthesis and respiration: Photosystem II
glr2323 Function Photosynthesis and respiration: Photosystem II
glr2324 Function Photosynthesis and respiration: Photosystem II
gll2337 Function Photosynthesis and respiration: Photosystem II
gll2338 Function Photosynthesis and respiration: Photosystem II
gll2341 Function Photosynthesis and respiration: Soluble electron carriers
glr2372 Function Photosynthesis and respiration: NADH dehydrogenase
glr2379 Function Photosynthesis and respiration: Photosystem II
glr2380 Function Photosynthesis and respiration: NADH dehydrogenase
gll2383 Function Photosynthesis and respiration: NADH dehydrogenase
gsl2401 Function Photosynthesis and respiration: Photosystem II
gll2536 Function Photosynthesis and respiration: NADH dehydrogenase
gll2567 Function Photosynthesis and respiration: CO2 fixation
gll2568 Function Photosynthesis and respiration: ATP synthase
gll2570 Function Photosynthesis and respiration: ATP synthase
glr2589 Function Photosynthesis and respiration: Phycobilisome
glr2599 Function Photosynthesis and respiration: NADH dehydrogenase
gll2646 Function Photosynthesis and respiration: Photosystem II
glr2656 Function Photosynthesis and respiration: Photosystem II
gll2679 Function Photosynthesis and respiration: Soluble electron carriers
glr2732 Function Photosynthesis and respiration: Photosystem II
gll2782 Function Photosynthesis and respiration: Soluble electron carriers
glr2806 Function Photosynthesis and respiration: Phycobilisome
gsr2807 Function Photosynthesis and respiration: Photosystem II
gll2873 Function Photosynthesis and respiration: Photosystem II
gll2905 Function Photosynthesis and respiration: ATP synthase
gll2906 Function Photosynthesis and respiration: ATP synthase
gll2907 Function Photosynthesis and respiration: ATP synthase
gll2908 Function Photosynthesis and respiration: ATP synthase
gsl2909 Function Photosynthesis and respiration: ATP synthase
gll2910 Function Photosynthesis and respiration: ATP synthase
gll2911 Function Photosynthesis and respiration: ATP synthase
gsl2997 Function Photosynthesis and respiration: Photosystem II
gsl2998 Function Photosynthesis and respiration: Soluble electron carriers
glr2999 Function Photosynthesis and respiration: Photosystem II
gsr3000 Function Photosynthesis and respiration: Photosystem II
gsl3001 Function Photosynthesis and respiration: Photosystem II
gsr3002 Function Photosynthesis and respiration: Photosystem II
glr3038 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr3039 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr3120 Function Photosynthesis and respiration: NADH dehydrogenase
gll3144 Function Photosynthesis and respiration: Photosystem II
gll3182 Function Photosynthesis and respiration: Soluble electron carriers
glr3217 Function Photosynthesis and respiration: Phycobilisome
glr3218 Function Photosynthesis and respiration: Phycobilisome
gll3219 Function Photosynthesis and respiration: Phycobilisome
gsl3287 Function Photosynthesis and respiration: Photosystem I
gll3362 Function Photosynthesis and respiration: Others
gll3363 Function Photosynthesis and respiration: Others
gll3364 Function Photosynthesis and respiration: Others
gsl3408 Function Photosynthesis and respiration: Photosystem I
glr3438 Function Photosynthesis and respiration: Photosystem I
glr3439 Function Photosynthesis and respiration: Photosystem I
glr3503 Function Photosynthesis and respiration: NADH dehydrogenase
gsr3623 Function Photosynthesis and respiration: Soluble electron carriers
gsl3634 Function Photosynthesis and respiration: Photosystem II
gsl3683 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr3691 Function Photosynthesis and respiration: Photosystem II
gsl3700 Function Photosynthesis and respiration: Cytochrome b6/f complex
glr3701 Function Photosynthesis and respiration: Photosystem I
gsr5001 Function Photosynthesis and respiration: Photosystem I
glr4315 Function Photosynthesis and respiration: ATP synthase
glr4424 Function Photosynthesis and respiration: CO2 fixation
gll0957 GO term Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor (GO:0016708)
gll0993 GO term Biological Process: DNA integration (GO:0015074)
gll0449 GO term Biological Process: DNA integration (GO:0015074)
gll2289 GO term Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702)
gll2484 GO term Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
gll2675 GO term Biological Process: DNA integration (GO:0015074)
gll4068 GO term Biological Process: DNA integration (GO:0015074)
glr0077 GO term Biological Process: DNA integration (GO:0015074)
glr2008 GO term Biological Process: DNA integration (GO:0015074)
glr2451 GO term Biological Process: DNA integration (GO:0015074)
glr2700 GO term Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor (GO:0016708)
glr3859 GO term Biological Process: DNA integration (GO:0015074)
glr4335 GO term Biological Process: DNA integration (GO:0015074)
gll1505 Blast Hits [nr] ref|YP_001551614.1| 16S rRNA-processing protein RimM [Prochlorococcus marinus str. MIT 9211] gi|238687125|sp|A9BD47.1|RIMM_PROM4 RecName: Full=Ribosome maturation factor rimM gi|159889446|gb|ABX09660.1| possible 16S rRNA processing protein RimM [Prochlorococcus marinus str. MIT 9211]
Blast Hits [sprot] RIMM_PROM4 (sp|A9BD47) Ribosome maturation factor rimM OS=Prochlorococcus marinus (strain MIT 9211) GN=rimM PE=3 SV=1
glr3488 Blast Hits [nr] ref|YP_002377649.1| hypothetical protein PCC7424_2360 [Cyanothece sp. PCC 7424] gi|226701263|sp|B7KIU5.1|RIMP_CYAP7 RecName: Full=Ribosome maturation factor rimP gi|218172048|gb|ACK70781.1| protein of unknown function DUF150 [Cyanothece sp. PCC 7424]
Blast Hits [sprot] RIMP_CYAP7 (sp|B7KIU5) Ribosome maturation factor rimP OS=Cyanothece sp. (strain PCC 7424) GN=rimP PE=3 SV=1
gll3314 Blast Hits [sprot] HYPA_RHILV (sp|P28154) Hydrogenase nickel incorporation protein hypA OS=Rhizobium leguminosarum bv. viciae GN=hypA PE=3 SV=1
glr2653 Blast Hits [sprot] RIMP_METFK (sp|Q1GXD8) Ribosome maturation factor rimP OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rimP PE=3 SV=1
glr3274 Blast Hits [sprot] RIMN_HALHL (sp|A1WZH9) Putative ribosome maturation factor rimN OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=rimN PE=3 SV=1
glr3640 Blast Hits [sprot] EFG_APPPP (sp|Q9ZEU4) Elongation factor G OS=Apple proliferation phytoplasma GN=fusA PE=3 SV=1
gsl2903 Blast Hits [sprot] RIMP_MICAN (sp|B0JU70) Ribosome maturation factor rimP OS=Microcystis aeruginosa (strain NIES-843) GN=rimP PE=3 SV=1
gll1172 Blast Hits [pln_est] gb|CN205916|CN205916 Tor6333 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll1515 Blast Hits [pln_est] gb|GH212832|GH212832 HVSMEb0009I22r2 Hordeum vulgare seedling shoot (dehydration stress) cDNA library HVSMEb (HVcDNA0002)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0012C10f, mRNA sequence.
gll2178 Blast Hits [pln_est] gb|CN209429|CN209429 Tor9945 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll2229 Blast Hits [pln_est] gb|CN207441|CN207441 Tor7861 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll2780 Blast Hits [pln_est] gb|CN209169|CN209169 Tor9684 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll3035 Blast Hits [pln_est] gb|CN200896|CN200896 Tor10566 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll3414 Blast Hits [pln_est] gb|BQ514340|BQ514340 EST621755 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMIL33 3' end, mRNA sequence.
glr1357 Blast Hits [pln_est] gb|CN204882|CN204882 Tor526 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr1467 Blast Hits [pln_est] gb|CN207441|CN207441 Tor7861 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr2753 Blast Hits [pln_est] gb|CN208991|CN208991 Tor9501 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr2773 Blast Hits [pln_est] gb|BQ515376|BQ515376 EST622791 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMIR72 5' end, mRNA sequence.
glr3166 Blast Hits [pln_est] gb|BQ507413|BQ507413 EST614828 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMGQ27 5' end, mRNA sequence.
glr3610 Blast Hits [pln_est] gb|CN200755|CN200755 Tor10424 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr4255 Blast Hits [TAIR_pep] AT5G44510.1 | Symbols: TAO1 | TAO1 (TARGET OF AVRB OPERATION1); ATP binding / protein binding / transmembrane receptor | chr5:17929673-17934188 REVERSE
Blast Hits [pln_est] gb|CN206831|CN206831 Tor7255 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr4385 Blast Hits [pln_est] gb|CN207005|CN207005 Tor7424 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
glr4399 Blast Hits [pln_est] gb|CN207441|CN207441 Tor7861 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gsr2449 Blast Hits [pln_est] gb|CN209235|CN209235 Tor9749 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gsr4420 Blast Hits [pln_est] gb|CN205126|CN205126 Tor5517 Gametophyte rehydration Library Syntrichia ruralis cDNA, mRNA sequence.
gll1206 Blast Hits [TAIR_pep] AT5G52100.1 | Symbols: crr1 | crr1 (chlororespiration reduction 1); dihydrodipicolinate reductase | chr5:21170203-21172107 FORWARD
gll1688 Blast Hits [TAIR_pep] AT3G04880.1 | Symbols: DRT102 | DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2) | chr3:1346431-1347363 REVERSE
gll2920 Blast Hits [TAIR_pep] AT1G67250.1 | Symbols: | proteasome maturation factor UMP1 family protein | chr1:25163808-25164967 REVERSE
glr0072 Blast Hits [TAIR_pep] AT4G18030.1 | Symbols: | dehydration-responsive family protein | chr4:10012850-10015267 REVERSE
glr1369 Blast Hits [TAIR_pep] AT5G18070.1 | Symbols: DRT101 | DRT101 (DNA-DAMAGE-REPAIR/TOLERATION 101); intramolecular transferase, phosphotransferases / magnesium ion binding | chr5:5981117-5982787 FORWARD
glr3091 Blast Hits [TAIR_pep] AT1G06570.1 | Symbols: PDS1, HPD | PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase | chr1:2012015-2013543 REVERSE
glr3133 Blast Hits [TAIR_pep] AT5G51070.1 | Symbols: ERD1, CLPD | ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | chr5:20764479-20768481 FORWARD
glr4343 Blast Hits [TAIR_pep] AT3G13730.1 | Symbols: CYP90D1 | CYP90D1; oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding | chr3:4498330-4500836 REVERSE
gsl0962 Blast Hits [TAIR_pep] AT1G17020.1 | Symbols: SRG1, ATSRG1 | SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | chr1:5820258-5821741 FORWARD
gsl1967 Blast Hits [TAIR_pep] AT3G04880.1 | Symbols: DRT102 | DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2) | chr3:1346431-1347363 REVERSE
gll0601 Genes and Mutants
Genes and Mutantsposted by Allison E McDonald <allison at utsc.utoronto.ca> at 2004-04-20
GeneNamePTOX
ProductNameplastoquinol terminal oxidase
FunctionPTOX is believed to oxidize plastoquinol to plastoquinone and toreduce oxygen to water. PTOX may represent the terminal oxidasein the process of chlororespiration.
CommentThe assignment of this gene as PTOX is based on multiple sequencealignments and molecular phylogenies.
Medline15082931

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (209)
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