in ?
cyanobase » Gloeobacter violaceus PCC 7421 » genes » search

Full-text search result: 41 genes by "copper" TXT SET

Gloeobacter violaceus PCC 7421 (41 genes ) TXT SET

gll0180 Gene product probable copper binding protein
GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR000923 Blue (type 1) copper domain; HMMPfam:PF00127 Copper-bind
Blast Hits [TAIR_pep] AT1G20340.1 | Symbols: DRT112, PETE2 | DRT112; copper ion binding / electron carrier | chr1:7042770-7043273 REVERSE
Blast Hits [nr] ref|YP_478108.1| plastocyanin/azurin family copper binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557888|gb|ABD02845.1| copper-binding protein, plastocyanin/azurin family [Synechococcus sp. JA-2-3B'a(2-13)]
gll2164 GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR001505 Copper centre Cu(A); PatternScan:PS00078 COX2
gll2341 GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR000923 Blue (type 1) copper domain; HMMPfam:PF00127 Copper-bind
InterPro IPR000923 Blue (type 1) copper domain; PatternScan:PS00196 COPPER_BLUE
InterPro IPR001235 Blue (type 1) copper protein; FPrintScan:PR00156 COPPERBLUE
Blast Hits [TAIR_pep] AT1G76100.1 | Symbols: PETE1 | PETE1 (PLASTOCYANIN 1); copper ion binding / electron carrier | chr1:28554217-28554732 REVERSE
gll2786 InterPro IPR012854 Copper amine oxidase-like, N-terminal; HMMPfam:PF07833 Cu_amine_oxidN1
InterPro IPR012854 Copper amine oxidase-like, N-terminal; superfamily:SSF55383 Cu_amine_oxidase-like_N
gll3290 GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR001287 Copper-containing nitrite reductase, N-terminal; FPrintScan:PR00695 CUNO2RDTASE
InterPro IPR011706 Multicopper oxidase, type 2; HMMPfam:PF07731 Cu-oxidase_2
InterPro IPR011707 Multicopper oxidase, type 3; HMMPfam:PF07732 Cu-oxidase_3
Blast Hits [sprot] ANIA_NEIGO (sp|Q02219) Copper-containing nitrite reductase OS=Neisseria gonorrhoeae GN=aniA PE=1 SV=1
gll3765 InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; Gene3D:G3DSA:3.60.140.10 DUF152
InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; HMMPfam:PF02578 Cu-oxidase_4
InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; HMMTigr:TIGR00726 DUF152
glr0739 GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR001505 Copper centre Cu(A); PatternScan:PS00078 COX2
glr1981 InterPro IPR001424 Superoxide dismutase, copper/zinc binding; Gene3D:G3DSA:2.60.40.200 SOD_Cu_Zn
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; HMMPanther:PTHR10003 SOD_Cu_Zn
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; HMMPfam:PF00080 Sod_Cu
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; superfamily:SSF49329 SOD_Cu_Zn
Blast Hits [TAIR_pep] AT1G08830.2 | Symbols: CSD1 | CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); superoxide dismutase | chr1:2827700-2829053 FORWARD
glr2170 InterPro IPR001424 Superoxide dismutase, copper/zinc binding; Gene3D:G3DSA:2.60.40.200 SOD_Cu_Zn
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; HMMPanther:PTHR10003 SOD_Cu_Zn
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; HMMPfam:PF00080 Sod_Cu
InterPro IPR001424 Superoxide dismutase, copper/zinc binding; superfamily:SSF49329 SOD_Cu_Zn
Blast Hits [TAIR_pep] AT2G28190.1 | Symbols: CSD2, CZSOD2 | CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); superoxide dismutase | chr2:12014548-12016303 FORWARD
Blast Hits [nr] ref|YP_001126974.1| superoxide dismutase (Cu-Zn) [Geobacillus thermodenitrificans NG80-2] gi|196250877|ref|ZP_03149562.1| superoxide dismutase copper/zinc binding [Geobacillus sp. G11MC16] gi|134268034|gb|ABO68229.1| Superoxide dismutase (Cu-Zn) [Geobacillus thermodenitrificans NG80-2] gi|196209606|gb|EDY04380.1| superoxide dismutase copper/zinc binding [Geobacillus sp. G11MC16]
glr2276 GO term Molecular Function: copper ion binding (GO:0005507)
InterPro IPR000923 Blue (type 1) copper domain; HMMPfam:PF00127 Copper-bind
InterPro IPR000923 Blue (type 1) copper domain; PatternScan:PS00196 COPPER_BLUE
InterPro IPR001235 Blue (type 1) copper protein; FPrintScan:PR00156 COPPERBLUE
Blast Hits [TAIR_pep] AT1G76100.1 | Symbols: PETE1 | PETE1 (PLASTOCYANIN 1); copper ion binding / electron carrier | chr1:28554217-28554732 REVERSE
glr4047 GO term Biological Process: copper ion transport (GO:0006825)
GO term Molecular Function: copper-exporting ATPase activity (GO:0004008)
InterPro IPR001756 ATPase, P-type copper-transporter; FPrintScan:PR00943 CUATPASE
InterPro IPR006403 ATPase, P type, cation/copper-transporter; HMMTigr:TIGR01511 ATPase-IB1_Cu
Blast Hits [sprot] ATCU1_RHIME (sp|P58341) Copper-transporting ATPase 1 OS=Rhizobium meliloti GN=actP1 PE=3 SV=1
gll2163 GO term Molecular Function: copper ion binding (GO:0005507)
glr0740 GO term Molecular Function: copper ion binding (GO:0005507)
gsr1996 Blast Hits [nr] ref|YP_003324295.1| copper-translocating P-type ATPase [Thermobaculum terrenum ATCC BAA-798] gi|269791333|gb|ACZ43473.1| copper-translocating P-type ATPase [Thermobaculum terrenum ATCC BAA-798]
gll2035 Blast Hits [sprot] CSOR_BACSU (sp|O32222) Copper-sensing transcriptional repressor csoR OS=Bacillus subtilis GN=csoR PE=1 SV=1
gll4045 Blast Hits [sprot] CSOR_MYCTU (sp|P71543) Copper-sensing transcriptional repressor csoR OS=Mycobacterium tuberculosis GN=csoR PE=1 SV=2
glr0048 Blast Hits [sprot] CSOR_BACSU (sp|O32222) Copper-sensing transcriptional repressor csoR OS=Bacillus subtilis GN=csoR PE=1 SV=1
glr0138 Blast Hits [TAIR_pep] AT5G44790.1 | Symbols: RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr5:18075846-18079817 REVERSE
Blast Hits [sprot] AHM5_ARATH (sp|Q9S7J8) Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1
glr1997 Blast Hits [sprot] COPB_ARCFU (sp|O30085) Probable copper-exporting P-type ATPase B OS=Archaeoglobus fulgidus GN=copB PE=1 SV=1
glr3104 Blast Hits [sprot] NOSF_PSEST (sp|P19844) Copper transport ATP-binding protein nosF OS=Pseudomonas stutzeri GN=nosF PE=3 SV=1
gll1845 Blast Hits [pln_est] dbj|DR743880|DR743880 RTCU1_18_E11.g1_A029 Roots plus added copper Pinus taeda cDNA clone RTCU1_18_E11_A029 5', mRNA sequence.
gsl3135 Blast Hits [pln_est] dbj|DW358499|DW358499 PU2_plate46_D19 PU2 Prunus persica cDNA clone PU2_plate46_D19 5' similar to PU2_plate46_D19 weakly similar to copper-binding protein (CUTA) Arabidopsis thaliana, mRNA sequence.
gll0173 Blast Hits [TAIR_pep] AT3G13400.1 | Symbols: sks13 | sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase | chr3:4355257-4357305 FORWARD
gll0238 Blast Hits [TAIR_pep] AT1G31690.1 | Symbols: | amine oxidase/ copper ion binding / quinone binding | chr1:11343980-11347767 FORWARD
gll0245 Blast Hits [TAIR_pep] AT3G09820.2 | Symbols: ADK1 | ADK1 (adenosine kinase 1); adenosine kinase/ copper ion binding | chr3:3012645-3014624 FORWARD
gll0853 Blast Hits [TAIR_pep] AT5G48450.1 | Symbols: sks3 | sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase | chr5:19633295-19635612 REVERSE
gll1892 Blast Hits [TAIR_pep] AT1G02920.1 | Symbols: ATGSTF7, GST11, ATGSTF8, GSTF7 | GSTF7; copper ion binding / glutathione binding / glutathione transferase | chr1:658886-659705 REVERSE
gll2121 Blast Hits [TAIR_pep] AT2G36530.1 | Symbols: LOS2 | LOS2; copper ion binding / phosphopyruvate hydratase | chr2:15321081-15323786 REVERSE
gll2193 Blast Hits [TAIR_pep] AT1G23010.1 | Symbols: LPR1 | LPR1 (Low Phosphate Root1); copper ion binding / oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor | chr1:8147353-8149580 FORWARD
gll2269 Blast Hits [TAIR_pep] AT1G31690.1 | Symbols: | amine oxidase/ copper ion binding / quinone binding | chr1:11343980-11347767 FORWARD
gll2292 Blast Hits [TAIR_pep] AT5G24580.1 | Symbols: | copper-binding family protein | chr5:8410394-8412087 REVERSE
gll2319 Blast Hits [TAIR_pep] AT1G62810.1 | Symbols: | copper amine oxidase, putative | chr1:23258253-23261772 REVERSE
gll3358 Blast Hits [TAIR_pep] AT4G22010.1 | Symbols: sks4 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase | chr4:11663429-11666463 FORWARD
gll3625 Blast Hits [TAIR_pep] AT3G56940.1 | Symbols: CRD1, CHL27, ACSF | CRD1 (COPPER RESPONSE DEFECT 1); DNA binding / magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase | chr3:21076594-21078269 FORWARD
gll3885 Blast Hits [TAIR_pep] AT2G33740.2 | Symbols: CUTA | CUTA; copper ion binding | chr2:14269590-14271523 FORWARD
glr0423 Blast Hits [TAIR_pep] AT5G44790.1 | Symbols: RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr5:18075846-18079817 REVERSE
glr0439 Blast Hits [TAIR_pep] AT2G15290.1 | Symbols: ATTIC21, TIC21, CIA5, PIC1 | TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21); copper uptake transmembrane transporter/ iron ion transmembrane transporter/ protein homodimerization | chr2:6642512-6644011 REVERSE
glr2702 Blast Hits [TAIR_pep] AT1G31670.1 | Symbols: | copper amine oxidase, putative | chr1:11337558-11341889 FORWARD
glr4189 Blast Hits [TAIR_pep] AT2G33740.2 | Symbols: CUTA | CUTA; copper ion binding | chr2:14269590-14271523 FORWARD
glr4372 Blast Hits [TAIR_pep] AT2G30870.1 | Symbols: ATGSTF10, ERD13, ATGSTF4, GSTF10 | GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | chr2:13141490-13142392 FORWARD
gsl4046 Blast Hits [TAIR_pep] AT4G33520.3 | Symbols: PAA1, HMA6 | PAA1 (P-TYPE ATP-ASE 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | chr4:16118993-16125849 FORWARD

Word clouds

API

? | +/- | Top
Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (41)
1.902757397

MicrobeBase