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Full-text search result: 70 genes by "bilin" TXT SET

Gloeobacter violaceus PCC 7421 (70 genes ) TXT SET

glr1261 Gene product phycoerythrobilin:ferredoxin oxidoreductase
GO term Biological Process: phytochromobilin biosynthetic process (GO:0010024)
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.1 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2803665-2805333 FORWARD
Blast Hits [nr] ref|YP_001864424.1| phycoerythrobilin:ferredoxin oxidoreductase [Nostoc punctiforme PCC 73102] gi|28380109|sp|Q93TM8.1|PEBB_NOSP7 RecName: Full=Phycoerythrobilin:ferredoxin oxidoreductase gi|13751784|gb|AAK38589.1|AF339058_1 phycoerythrobilin:ferredoxin oxidoreductase [Nostoc punctiforme] gi|186463680|gb|ACC79481.1| ferredoxin-dependent bilin reductase [Nostoc punctiforme PCC 73102]
Blast Hits [pln_est] gb|CO653278|CO653278 Sylvie384K02_CCT27_11 Chondrus crispus thallus Zap Express Library Chondrus crispus cDNA clone Sylvie384K02_CCT27_11 5' similar to phycoerythrobilin:ferredoxin oxidoreductase [Gloeobacter violaceus PCC 7421] with an e-value of 6,00E-50, mRNA sequence.
Blast Hits [sprot] PEBB_NOSP7 (sp|Q93TM8) Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pebB PE=3 SV=1
glr1260 GO term Biological Process: phytochromobilin biosynthetic process (GO:0010024)
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.1 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2803665-2805333 FORWARD
Blast Hits [nr] ref|YP_001864425.1| dihydrobiliverdin:ferredoxin oxidoreductase [Nostoc punctiforme PCC 73102] gi|13751856|gb|AAK38598.1|AF352049_1 15,16 dihydrobiliverdin:ferredoxin oxidoreductase [Nostoc punctiforme] gi|186463681|gb|ACC79482.1| ferredoxin-dependent bilin reductase [Nostoc punctiforme PCC 73102]
glr2589 Gene product phycocyanobilin:ferredoxin oxidoreductase
GO term Biological Process: phytochromobilin biosynthetic process (GO:0010024)
InterPro IPR009249 Ferredoxin-dependent bilin reductase; HMMPfam:PF05996 Fe_bilin_red
Blast Hits [TAIR_pep] AT3G09150.1 | Symbols: HY2, GUN3 | HY2 (ELONGATED HYPOCOTYL 2); phytochromobilin:ferredoxin oxidoreductase | chr3:2803665-2805333 FORWARD
Blast Hits [nr] ref|YP_002485509.1| ferredoxin-dependent bilin reductase [Cyanothece sp. PCC 7425] gi|219866809|gb|ACL47148.1| ferredoxin-dependent bilin reductase [Cyanothece sp. PCC 7425]
Blast Hits [sprot] PCYA_CYAP7 (sp|B7KJQ2) Phycocyanobilin:ferredoxin oxidoreductase OS=Cyanothece sp. (strain PCC 7424) GN=pcyA PE=3 SV=1
glr3212 Gene product porphobilinogen deaminase
Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
InterPro IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PatternScan:PS00533 PORPHOBILINOGEN_DEAM
Blast Hits [nr] ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106] gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
Blast Hits [sprot] HEM3_SYNE7 (sp|Q31PM2) Porphobilinogen deaminase OS=Synechococcus elongatus (strain PCC 7942) GN=hemC PE=3 SV=1
glr4358 Gene product porphobilinogen synthase (5-aminolevulinate dehydratase)
Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
GO term Molecular Function: porphobilinogen synthase activity (GO:0004655)
InterPro IPR001731 Tetrapyrrole biosynthesis, porphobilinogen synthase; FPrintScan:PR00144 DALDHYDRTASE
InterPro IPR001731 Tetrapyrrole biosynthesis, porphobilinogen synthase; HMMPIR:PIRSF001415 Porphbilin_synth
InterPro IPR001731 Tetrapyrrole biosynthesis, porphobilinogen synthase; HMMPanther:PTHR11458 AlaD_dehydratase
InterPro IPR001731 Tetrapyrrole biosynthesis, porphobilinogen synthase; HMMPfam:PF00490 ALAD
InterPro IPR001731 Tetrapyrrole biosynthesis, porphobilinogen synthase; PatternScan:PS00169 D_ALA_DEHYDRATASE
Blast Hits [TAIR_pep] AT1G69740.2 | Symbols: HEMB1 | HEMB1; catalytic/ metal ion binding / porphobilinogen synthase | chr1:26232197-26234713 FORWARD
glr0071 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0123 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0170 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0215 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0292 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0377 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0378 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0384 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0385 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0410 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0747 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0839 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0850 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0870 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr0943 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1234 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1291 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll1377 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll1629 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll1636 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1714 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1755 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1772 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr1809 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll1922 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2021 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2022 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2156 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2158 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2173 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2203 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2204 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2369 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2370 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2448 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2486 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2501 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2546 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr2580 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll2622 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr3076 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3085 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3099 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr3121 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr3328 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3511 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3561 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr3695 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3727 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3876 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll3877 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll4362 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr4377 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
glr4402 Function Biosynthesis of cofactors, prosthetic groups, and carriers: Cobalamin, heme, phycobilin and porphyrin
gll0981 Gene product phycocyanin alpha phycocyanobilin lyase related protein NblB homolog
Blast Hits [nr] ref|NP_924521.1| phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein [Gloeobacter violaceus PCC 7421] gi|35212140|dbj|BAC89516.1| nblB [Gloeobacter violaceus PCC 7421]
Blast Hits [sprot] CPCE_PSEA9 (sp|Q52448) Phycocyanobilin lyase subunit alpha OS=Pseudanabaena sp. (strain PCC 7409) GN=cpcE1 PE=3 SV=1
gll1255 Gene product bilin biosynthesis protein MpeU homolog
Blast Hits [sprot] MPEU_SYNPY (sp|Q02177) Bilin biosynthesis protein mpeU OS=Synechococcus sp. (strain WH8020) GN=mpeU PE=3 SV=1
glr1257 Gene product phycocyanin alpha phycocyanobilin lyase related protein NblB homolog
glr1268 Gene product phycocyanobilin lyase alpha subunit CpcE
Blast Hits [nr] ref|YP_477184.1| phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556964|gb|ABD01921.1| phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [sprot] CPCE_THEEB (sp|P50037) Phycocyanobilin lyase subunit alpha OS=Thermosynechococcus elongatus (strain BP-1) GN=cpcE PE=3 SV=1
glr1269 Gene product phycocyanobilin lyase alpha subunit CpcF
Blast Hits [nr] ref|YP_477185.1| phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556965|gb|ABD01922.1| phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [sprot] RPCF_SYNPY (sp|Q02185) Bilin biosynthesis protein rpcF OS=Synechococcus sp. (strain WH8020) GN=rpcF PE=3 SV=1
gll1575 Gene product phycocyanin alpha phycocyanobilin lyase related protein NblB homolog
Blast Hits [nr] ref|NP_923927.1| phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein [Gloeobacter violaceus PCC 7421] gi|35211544|dbj|BAC88922.1| nblB [Gloeobacter violaceus PCC 7421]
glr2234 Gene product phycocyanin alpha phycocyanobilin lyase related protein NblB homolog
Blast Hits [sprot] CPCE_PSEA9 (sp|Q52448) Phycocyanobilin lyase subunit alpha OS=Pseudanabaena sp. (strain PCC 7409) GN=cpcE1 PE=3 SV=1
glr2532 Blast Hits [nr] ref|YP_003376546.1| putative pirin-related protein [Xanthomonas albilineans] gi|283474053|emb|CBA16554.1| putative pirin-related protein [Xanthomonas albilineans]
gll3466 Blast Hits [sprot] HEM3_MACCJ (sp|B9E743) Porphobilinogen deaminase OS=Macrococcus caseolyticus (strain JCSC5402) GN=hemC PE=3 SV=1
gll4321 Blast Hits [sprot] MPEU_SYNPY (sp|Q02177) Bilin biosynthesis protein mpeU OS=Synechococcus sp. (strain WH8020) GN=mpeU PE=3 SV=1
glr3391 Blast Hits [sprot] CPCE_THEEB (sp|P50037) Phycocyanobilin lyase subunit alpha OS=Thermosynechococcus elongatus (strain BP-1) GN=cpcE PE=3 SV=1

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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