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Full-text search result: 80 genes by "Japonica" TXT SET

Gloeobacter violaceus PCC 7421 (80 genes ) TXT SET

gll0764	Blast Hits	[nr] dbj\|BAD68653.1\| putative root cap-specific protein [Oryza sativa Japonica Group] gi\|55296998\|dbj\|BAD68473.1\| putative root cap-specific protein [Oryza sativa Japonica Group] gi\|125553969\|gb\|EAY99574.1\| hypothetical protein OsI_21549 [Oryza sativa Indica Group] gi\|215686462\|dbj\|BAG87723.1\| unnamed protein product [Oryza sativa Japonica Group] gi\|215707052\|dbj\|BAG93512.1\| unnamed protein product [Oryza sativa Japonica Group]
gll3815	Blast Hits	[nr] ref\|NP_001063911.1\| Os09g0558300 [Oryza sativa Japonica Group] gi\|52076930\|dbj\|BAD45941.1\| putative cyclic nucleotide gated channel homolog [Oryza sativa Japonica Group] gi\|113632144\|dbj\|BAF25825.1\| Os09g0558300 [Oryza sativa Japonica Group] gi\|218202617\|gb\|EEC85044.1\| hypothetical protein OsI_32366 [Oryza sativa Indica Group] gi\|222642078\|gb\|EEE70210.1\| hypothetical protein OsJ_30314 [Oryza sativa Japonica Group]
glr1593	Blast Hits	[nr] gb\|EEE68602.1\| hypothetical protein OsJ_27135 [Oryza sativa Japonica Group]
glr1593	Blast Hits	[sprot] BURPC_ORYSJ (sp\|Q6ZA27) BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1
gll0350	Blast Hits	[sprot] Y4765_ORYSJ (sp\|Q7XKC4) Putative B3 domain-containing protein Os04g0676500 OS=Oryza sativa subsp. japonica GN=Os04g0676500 PE=3 SV=2
gll2003	Blast Hits	[sprot] SFR2_ORYSJ (sp\|Q8L6H7) Beta-glucosidase-like SFR2, chloroplastic OS=Oryza sativa subsp. japonica GN=SFR2 PE=2 SV=1
gll2670	Blast Hits	[sprot] TYDC1_ORYSJ (sp\|Q7XHL3) Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica GN=Os07g0437500 PE=2 SV=1
gll2707	Blast Hits	[sprot] LAC23_ORYSJ (sp\|Q2QYS3) Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1
gll3147	Blast Hits	[sprot] PHYK2_ORYSJ (sp\|Q5N9J9) Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3
gll3839	Blast Hits	[sprot] SPP1_ORYSJ (sp\|Q94E75) Probable sucrose-phosphatase 1 OS=Oryza sativa subsp. japonica GN=SPP1 PE=2 SV=1
glr1719	Blast Hits	[sprot] CCDA2_ORYSJ (sp\|Q2QY07) Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica GN=CCDA2 PE=2 SV=1
glr2492	Blast Hits	[sprot] SUS1_ORYSJ (sp\|P31924) Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1
glr4229	Blast Hits	[sprot] CSLCA_ORYSJ (sp\|Q84Z01) Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1
gsl2837	Blast Hits	[sprot] Y2559_ORYSJ (sp\|Q6K3B1) Putative B3 domain-containing protein Os02g0455900 OS=Oryza sativa subsp. japonica GN=Os02g0455900 PE=3 SV=1
gll0130	Blast Hits	[pln_est] gb\|CF306451\|CF306451 HDA1--03-O04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--03-O04, mRNA sequence.
gll0133	Blast Hits	[pln_est] gb\|CI411819\|CI411819 CI411819 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza sativa Japonica Group cDNA clone J06B5049L16M3 3', mRNA sequence.
gll0292	Blast Hits	[pln_est] gb\|CI184003\|CI184003 CI184003 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group cDNA clone 035-M032R-B02 3', mRNA sequence.
gll0308	Blast Hits	[pln_est] gb\|CI605493\|CI605493 CI605493 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone J03A3001K19Aa 5', mRNA sequence.
gll0449	Blast Hits	[pln_est] gb\|CF338900\|CF338900 RCL1--03-C09.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--03-C09, mRNA sequence.
gll0452	Blast Hits	[pln_est] gb\|CI450443\|CI450443 CI450443 Oryza sativa (japonica cultivar-group) whole body 3mM SA(salicylic acid) for 1day Oryza sativa Japonica Group cDNA clone J07B5008P11M3 3', mRNA sequence.
gll0484	Blast Hits	[pln_est] gb\|CD671000\|CD671000 OsMR421 5MT resistant rice mutant cDNA library Oryza sativa Japonica Group cDNA, mRNA sequence.
gll0495	Blast Hits	[pln_est] gb\|CF306534\|CF306534 HDA1--04-C06.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--04-C06, mRNA sequence.
gll0875	Blast Hits	[pln_est] gb\|CF339884\|CF339884 RCL1--06-D24.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--06-D24, mRNA sequence.
gll0911	Blast Hits	[pln_est] emb\|AU164175\|AU164175 AU164175 Rice panicle (longer than 10cm) Oryza sativa Japonica Group cDNA clone E20561, mRNA sequence.
gll0921	Blast Hits	[pln_est] gb\|CF306058\|CF306058 HDA1--02-J04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--02-J04, mRNA sequence.
gll0957	Blast Hits	[pln_est] gb\|CB678519\|CB678519 OSJNEe16K22.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe16K22 5', mRNA sequence.
gll1036	Blast Hits	[pln_est] gb\|CI195914\|CI195914 CI195914 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group cDNA clone 036-M084R-D05 3', mRNA sequence.
gll1093	Blast Hits	[pln_est] gb\|CF339976\|CF339976 RCL1--06-I20.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--06-I20, mRNA sequence.
gll1489	Blast Hits	[pln_est] gb\|BY883998\|BY883998 BY883998 Cryptomeria japonica male strobilus Cryptomeria japonica cDNA clone CMFL017_M05 5', mRNA sequence.
gll1557	Blast Hits	[pln_est] gb\|CB660954\|CB660954 OSJNEd03D09.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd03D09 5', mRNA sequence.
gll1674	Blast Hits	[pln_est] gb\|CI011358\|CI011358 CI011358 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group cDNA clone 006-M062R-C08 3', mRNA sequence.
gll1836	Blast Hits	[pln_est] gb\|CB672978\|CB672978 OSJNEe07E15.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe07E15 5', mRNA sequence.
gll2123	Blast Hits	[pln_est] gb\|CB659285\|CB659285 OSJNEc16C01.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc16C01 3', mRNA sequence.
gll2126	Blast Hits	[pln_est] gb\|CF339976\|CF339976 RCL1--06-I20.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--06-I20, mRNA sequence.
gll2215	Blast Hits	[pln_est] dbj\|EE591621\|EE591621 FU_RCC01a-2-G11.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA sequence.
gll2293	Blast Hits	[pln_est] gb\|CI772758\|CI772758 CI772758 Oryza sativa (japonica cultivar-group) root of seedling 2ppm BAP(benzyl amino purine) Oryza sativa Japonica Group cDNA clone J10B0068M22T3 5', mRNA sequence.
gll2512	Blast Hits	[pln_est] gb\|CI770083\|CI770083 CI770083 Oryza sativa (japonica cultivar-group) root of seedling 50ppm CuSO4 for 3days Oryza sativa Japonica Group cDNA clone J10B0059I02T3 5', mRNA sequence.
gll2596	Blast Hits	[pln_est] gb\|BY884926\|BY884926 BY884926 Cryptomeria japonica male strobilus Cryptomeria japonica cDNA clone CMFL020_D22 5', mRNA sequence.
gll2646	Blast Hits	[pln_est] gb\|CF323263\|CF323263 HDN--03-F24.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library II (HDN) Oryza sativa Japonica Group cDNA clone HDN--03-F24, mRNA sequence.
gll2667	Blast Hits	[pln_est] gb\|CF306058\|CF306058 HDA1--02-J04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--02-J04, mRNA sequence.
gll2783	Blast Hits	[pln_est] gb\|CF306451\|CF306451 HDA1--03-O04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--03-O04, mRNA sequence.
gll2957	Blast Hits	[pln_est] gb\|CI568599\|CI568599 CI568599 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone J01B3050J24T3 5', mRNA sequence.
gll3103	Blast Hits	[pln_est] gb\|CI189172\|CI189172 CI189172 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group cDNA clone 035-M098R-H02 3', mRNA sequence.
gll3529	Blast Hits	[pln_est] gb\|CI666075\|CI666075 CI666075 Oryza sativa (japonica cultivar-group) 4th leaf leaf 1mM ACC(1-aminocyclopropane-1-carboxylate) Oryza sativa Japonica Group cDNA clone J06B5193H05T3 5', mRNA sequence.
gll3732	Blast Hits	[pln_est] gb\|CF306940\|CF306940 HDA1--05-E12.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--05-E12, mRNA sequence.
gll3884	Blast Hits	[pln_est] gb\|CF306058\|CF306058 HDA1--02-J04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--02-J04, mRNA sequence.
gll4011	Blast Hits	[pln_est] gb\|CI567078\|CI567078 CI567078 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone J01B3041C01T3 5', mRNA sequence.
gll4023	Blast Hits	[pln_est] gb\|CB671432\|CB671432 OSJNEe05A09.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe05A09 3', mRNA sequence.
gll4124	Blast Hits	[pln_est] gb\|CF306713\|CF306713 HDA1--04-K09.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--04-K09, mRNA sequence.
gll4271	Blast Hits	[pln_est] gb\|CB645569\|CB645569 OSJNEb07F18.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb07F18 5', mRNA sequence.
gll4427	Blast Hits	[pln_est] gb\|CF307455\|CF307455 HDA1--06-M04.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--06-M04, mRNA sequence.
glr0280	Blast Hits	[pln_est] gb\|CI189172\|CI189172 CI189172 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group cDNA clone 035-M098R-H02 3', mRNA sequence.
glr0548	Blast Hits	[pln_est] gb\|CA754587\|CA754587 BR030002000_PLATE_D05_36_044.ab1 OA Oryza sativa Japonica Group cDNA clone BR030002000_PLATE_D05_36_044.ab1 similar to No protein aligment, mRNA sequence.
glr0575	Blast Hits	[pln_est] gb\|CF306869\|CF306869 HDA1--05-B08.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--05-B08, mRNA sequence.
glr0871	Blast Hits	[pln_est] gb\|CA755636\|CA755636 BR030025000_PLATE_B01_2_010.ab1 OA Oryza sativa Japonica Group cDNA clone BR030025000_PLATE_B01_2_010.ab1 similar to NP_485658.1\| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120], mRNA sequence.
glr0872	Blast Hits	[pln_est] gb\|CF339976\|CF339976 RCL1--06-I20.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--06-I20, mRNA sequence.
glr0931	Blast Hits	[pln_est] gb\|CF330461\|CF330461 NACL--06-C23.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clone NACL--06-C23, mRNA sequence.
glr1163	Blast Hits	[pln_est] gb\|BY903608\|BY903608 BY903608 Cryptomeria japonica male strobilus Cryptomeria japonica cDNA clone CMFL021_K05 3', mRNA sequence.
glr1246	Blast Hits	[pln_est] gb\|CI766554\|CI766554 CI766554 Oryza sativa (japonica cultivar-group) root of seedling 50ppm CuSO4 for 3days Oryza sativa Japonica Group cDNA clone J10B0046K21T3 5', mRNA sequence.
glr1270	Blast Hits	[pln_est] gb\|CF307318\|CF307318 HDA1--06-F20.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--06-F20, mRNA sequence.
glr1342	Blast Hits	[pln_est] gb\|CF340080\|CF340080 RCL1--06-O05.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--06-O05, mRNA sequence.
glr1429	Blast Hits	[pln_est] gb\|CI077294\|CI077294 CI077294 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Group cDNA clone 016-M080R-E12 3', mRNA sequence.
glr1475	Blast Hits	[pln_est] gb\|CI627880\|CI627880 CI627880 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J04B3037G13T3 5', mRNA sequence.
glr1568	Blast Hits	[pln_est] gb\|CF306596\|CF306596 HDA1--04-F03.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--04-F03, mRNA sequence.
glr1591	Blast Hits	[pln_est] gb\|CI635219\|CI635219 CI635219 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), after 10hr Oryza sativa Japonica Group cDNA clone J06B5020N02T3 5', mRNA sequence.
glr1610	Blast Hits	[pln_est] gb\|CI189172\|CI189172 CI189172 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group cDNA clone 035-M098R-H02 3', mRNA sequence.
glr2021	Blast Hits	[pln_est] dbj\|DC882821\|DC882821 DC882821 Cryptomeria japonica xylem (sapwood-heartwood transition zone) Cryptomeria japonica cDNA clone CjTZ05D04, mRNA sequence.
glr2432	Blast Hits	[pln_est] gb\|CI235737\|CI235737 CI235737 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and root of seedlings Oryza sativa Japonica Group cDNA clone 041-M090R-C05 3', mRNA sequence.
glr2451	Blast Hits	[pln_est] gb\|CF339041\|CF339041 RCL1--03-J14.g1 Regenerated callus lambda phage cDNA library (RCL1) Oryza sativa Japonica Group cDNA clone RCL1--03-J14, mRNA sequence.
glr2470	Blast Hits	[pln_est] gb\|CI173383\|CI173383 CI173383 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clone 033-M076R-B01 3', mRNA sequence.
glr2925	Blast Hits	[pln_est] gb\|BJ936860\|BJ936860 BJ936860 Cryptomeria japonica pollen Cryptomeria japonica cDNA clone CP10144 5', mRNA sequence.
glr3069	Blast Hits	[pln_est] gb\|CF306399\|CF306399 HDA1--03-L13.g1 OsHDAC1-overexpressing transgenic rice lambda phage cDNA library I (HDA1) Oryza sativa Japonica Group cDNA clone HDA1--03-L13, mRNA sequence.
glr3156	Blast Hits	[pln_est] gb\|CF304163\|CF304163 ABF1--04-D21.g1 ABF3-overexpressing transgenic rice lambda phage cDNA library (ABF1) Oryza sativa Japonica Group cDNA clone ABF1--04-D21, mRNA sequence.
glr3392	Blast Hits	[pln_est] gb\|CI148656\|CI148656 CI148656 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa Japonica Group cDNA clone 028-M130R-F09 3', mRNA sequence.
glr3807	Blast Hits	[pln_est] gb\|CI763260\|CI763260 CI763260 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Group cDNA clone J10B0034N19T3 5', mRNA sequence.
glr3875	Blast Hits	[pln_est] gb\|CI235737\|CI235737 CI235737 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and root of seedlings Oryza sativa Japonica Group cDNA clone 041-M090R-C05 3', mRNA sequence.
glr4094	Blast Hits	[pln_est] gb\|BY889720\|BY889720 BY889720 Cryptomeria japonica male strobilus Cryptomeria japonica cDNA clone CMFL033_H21 5', mRNA sequence.
glr4103	Blast Hits	[pln_est] gb\|CI309238\|CI309238 CI309238 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Group cDNA clone 015-M053F-A06 5', mRNA sequence.
glr4343	Blast Hits	[pln_est] gb\|CI235737\|CI235737 CI235737 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks after flowering and root of seedlings Oryza sativa Japonica Group cDNA clone 041-M090R-C05 3', mRNA sequence.
gsl3683	Blast Hits	[pln_est] gb\|CI731743\|CI731743 CI731743 Oryza sativa (japonica cultivar-group) 9 leaf-stage leaf Oryza sativa Japonica Group cDNA clone J08B0097O07T3 5', mRNA sequence.
gsr2938	Blast Hits	[pln_est] gb\|BY913597\|BY913597 BY913597 Cryptomeria japonica male strobilus Cryptomeria japonica cDNA clone CMFL051_L24 3', mRNA sequence.

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	Column	Description and example
1	Data Source Name	c.f. Synechocystis
2	Gene ID	c.f. slr1311
3	Category name	one of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4	Description	Free text

SET

	Column	Description and example
1	Gene ID	c.f. slr1311

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Full-text search result: 80 genes by "Japonica" TXT SET

Gloeobacter violaceus PCC 7421 (80 genes ) TXT SET

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Full-text search result: 80 genes by "Japonica" TXT SET

Gloeobacter violaceus PCC 7421 (80 genes ) TXT SET

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