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Full-text search result: 154 genes by "770" TXT SET

Gloeobacter violaceus PCC 7421 (154 genes ) TXT SET

gll1130 InterPro IPR003770 Uncharacterised protein family YceG-like; HMMPfam:PF02618 ADC_lyase
InterPro IPR003770 Uncharacterised protein family YceG-like; HMMTigr:TIGR00247 ADC_lyase
gll1206 InterPro IPR011770 Dihydrodipicolinate reductase, bacterial/plant; HMMPanther:PTHR20836 DapB_bac/pln
InterPro IPR011770 Dihydrodipicolinate reductase, bacterial/plant; HMMTigr:TIGR00036 dapB
gll1225 InterPro IPR018300 Aminotransferase, class IV, conserved site; PatternScan:PS00770 AA_TRANSFER_CLASS_4
Blast Hits [pln_est] dbj|ES790090|ES790090 061124AAWA006770CT (AAWA) Royal Gala 59 DAFB seeds Malus x domestica cDNA clone AAWAA00677, mRNA sequence.
gll1251 InterPro IPR000031 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Gene3D:G3DSA:3.40.50.7700 AIR_carboxyl
gll1462 InterPro IPR000031 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Gene3D:G3DSA:3.40.50.7700 AIR_carboxyl
gll0770 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
InterPro IPR000253 Forkhead-associated; Gene3D:G3DSA:2.60.200.20 FHA
InterPro IPR000253 Forkhead-associated; HMMPfam:PF00498 FHA
InterPro IPR000253 Forkhead-associated; HMMSmart:SM00240 FHA
InterPro IPR000253 Forkhead-associated; ProfileScan:PS50006 FHA_DOMAIN
InterPro IPR008984 SMAD/FHA domain; superfamily:SSF49879 SMAD_FHA
Blast Hits [TAIR_pep] AT5G19280.1 | Symbols: KAPP, RAG1 | KAPP (KINASE ASSOCIATED PROTEIN PHOSPHATASE); phosphoprotein phosphatase/ protein kinase binding / protein serine/threonine phosphatase | chr5:6488450-6493182 FORWARD
Blast Hits [nr] ref|YP_003721701.1| FHA domain-containing protein ['Nostoc azollae' 0708] gi|298233442|gb|ADI64578.1| FHA domain containing protein ['Nostoc azollae' 0708]
Blast Hits [pln_est] gb|FG599076|FG599076 PFR_T3_74R_F04_11SEP2003_022 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] EMBR_MYCTU (sp|P66799) Probable regulatory protein embR OS=Mycobacterium tuberculosis GN=embR PE=1 SV=1
gll2770 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
InterPro NULL NULL; superfamily:SSF54593 SSF54593
Blast Hits [TAIR_pep] AT3G23590.1 | Symbols: RFR1 | RFR1 (REF4-related 1) | chr3:8467638-8473469 FORWARD
Blast Hits [nr] ref|YP_001378249.1| glyoxalase/bleomycin resistance protein/dioxygenase [Anaeromyxobacter sp. Fw109-5] gi|152027497|gb|ABS25265.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Anaeromyxobacter sp. Fw109-5]
Blast Hits [sprot] UNG_ALKMQ (sp|A6TVW5) Uracil-DNA glycosylase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ung PE=3 SV=1
gll3770 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor (GO:0016655)
InterPro IPR020874 NAD(P)H-quinone oxidoreductase, subunit N; HMMPfam:PF11909 NdhN
Blast Hits [TAIR_pep] AT5G58260.1 | Symbols: | Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. | chr5:23561075-23561929 REVERSE
Blast Hits [nr] ref|NP_681920.1| hypothetical protein tlr1130 [Thermosynechococcus elongatus BP-1] gi|81743251|sp|Q8DJU2.1|NDHN_THEEB RecName: Full=NAD(P)H-quinone oxidoreductase subunit N; AltName: Full=NAD(P)H dehydrogenase I subunit N; Short=NDH-1 subunit N; Short=NDH-N gi|22294853|dbj|BAC08682.1| tlr1130 [Thermosynechococcus elongatus BP-1]
Blast Hits [pln_est] gb|FC327416|FC327416 CAYY10907.rev CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY10907 3', mRNA sequence.
Blast Hits [sprot] NDHN_THEEB (sp|Q8DJU2) NAD(P)H-quinone oxidoreductase subunit N OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhN PE=1 SV=1
glr0749 InterPro NULL NULL; superfamily:SSF56770 SSF56770
glr1472 InterPro IPR017703 Folate-binding, YgfZ; HMMTigr:TIGR03317 ygfZ_signature
glr2379 InterPro NULL NULL; superfamily:SSF56770 SSF56770
glr3120 InterPro IPR010096 NADH-quinone oxidoreductase, chain N; HMMTigr:TIGR01770 NDH_I_N
gsr3224 InterPro IPR011660 Rv0623-like transcription factor; HMMPfam:PF07704 PSK_trans_fac
gll1770 Gene product unknown protein
Function No similarity: No similarity
Blast Hits [TAIR_pep] AT4G20070.1 | Symbols: ATAAH | ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase); allantoate deiminase/ metallopeptidase | chr4:10861548-10864529 FORWARD
Blast Hits [nr] ref|YP_003709983.1| hypothetical protein wcw_1632 [Waddlia chondrophila WSU 86-1044] gi|297377147|gb|ADI38977.1| hypothetical protein wcw_1632 [Waddlia chondrophila WSU 86-1044]
gll0109 Blast Hits [nr] ref|ZP_05028308.1| conserved hypothetical protein TIGR00159 [Microcoleus chthonoplastes PCC 7420] gi|196178772|gb|EDX73770.1| conserved hypothetical protein TIGR00159 [Microcoleus chthonoplastes PCC 7420]
gll0508 Blast Hits [nr] ref|ZP_03157707.1| conserved hypothetical protein [Cyanothece sp. PCC 7822] gi|196199912|gb|EDX94735.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
gll0553 Blast Hits [nr] ref|ZP_05025304.1| hypothetical protein MC7420_2018 [Microcoleus chthonoplastes PCC 7420] gi|196182028|gb|EDX77015.1| hypothetical protein MC7420_2018 [Microcoleus chthonoplastes PCC 7420]
gll0781 Blast Hits [nr] ref|YP_477060.1| carbohydrate kinase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556840|gb|ABD01797.1| carbohydrate kinase, FGGY family [Synechococcus sp. JA-2-3B'a(2-13)]
gll0788 Blast Hits [nr] ref|NP_441022.1| hypothetical protein slr1885 [Synechocystis sp. PCC 6803] gi|1652783|dbj|BAA17702.1| slr1885 [Synechocystis sp. PCC 6803]
gll1426 Blast Hits [nr] ref|YP_002373858.1| ABC exporter ATP-binding subunit, DevA family [Cyanothece sp. PCC 8801] gi|257061550|ref|YP_003139438.1| ABC exporter ATP-binding subunit, DevA family [Cyanothece sp. PCC 8802] gi|218168965|gb|ACK67702.1| ABC exporter ATP-binding subunit, DevA family [Cyanothece sp. PCC 8801] gi|256591716|gb|ACV02603.1| ABC exporter ATP-binding subunit, DevA family [Cyanothece sp. PCC 8802]
gll2164 Blast Hits [nr] ref|ZP_06305770.1| cytochrome C oxidase subunit II, transmembrane region protein [Raphidiopsis brookii D9] gi|281197450|gb|EFA72347.1| cytochrome C oxidase subunit II, transmembrane region protein [Raphidiopsis brookii D9]
gll2701 Blast Hits [nr] ref|ZP_05005369.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197703856|gb|EDY49668.1| NHL repeat-containing protein [Streptomyces clavuligerus ATCC 27064]
gll2731 Blast Hits [nr] ref|YP_001717709.1| amino acid-binding ACT domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638571|gb|ACA60077.1| amino acid-binding ACT domain protein [Candidatus Desulforudis audaxviator MP104C]
Blast Hits [sprot] ILVH_AQUAE (sp|O67703) Acetolactate synthase small subunit OS=Aquifex aeolicus GN=ilvH PE=3 SV=1
gll3008 Blast Hits [nr] ref|YP_477706.1| sigma-70 family RNA polymerase sigma factor [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557486|gb|ABD02443.1| RNA polymerase sigma-70 factor family [Synechococcus sp. JA-2-3B'a(2-13)]
gll3356 Blast Hits [nr] ref|NP_488111.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|39932230|sp|Q8YPW9.1|SYK_ANASP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS gi|17133206|dbj|BAB75770.1| lysyl-tRNA synthetase [Nostoc sp. PCC 7120]
gll3607 Blast Hits [nr] ref|ZP_05029917.1| sucrose synthase [Microcoleus chthonoplastes PCC 7420] gi|196177095|gb|EDX72104.1| sucrose synthase [Microcoleus chthonoplastes PCC 7420]
gll3635 Blast Hits [nr] ref|YP_002770546.1| hypothetical protein BBR47_10650 [Brevibacillus brevis NBRC 100599] gi|226093600|dbj|BAH42042.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
gll3676 Blast Hits [nr] ref|ZP_06770546.1| Putative permease [Streptomyces clavuligerus ATCC 27064] gi|294324502|gb|EFG06145.1| Putative permease [Streptomyces clavuligerus ATCC 27064]
gll3765 Blast Hits [nr] ref|YP_002372926.1| protein of unknown function DUF152 [Cyanothece sp. PCC 8801] gi|218168033|gb|ACK66770.1| protein of unknown function DUF152 [Cyanothece sp. PCC 8801]
gll3808 Blast Hits [nr] ref|ZP_07030215.1| transcriptional regulator, AraC family [Acidobacterium sp. MP5ACTX8] gi|298601547|gb|EFI57702.1| transcriptional regulator, AraC family [Acidobacterium sp. MP5ACTX8]
gll4346 Blast Hits [nr] ref|YP_369794.1| glutathione S-transferase-like protein [Burkholderia sp. 383] gi|77967770|gb|ABB09150.1| Glutathione S-transferase-like protein [Burkholderia sp. 383]
gll4406 Blast Hits [nr] ref|YP_002770602.1| hypothetical protein BBR47_11210 [Brevibacillus brevis NBRC 100599] gi|226093656|dbj|BAH42098.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
glr0605 Blast Hits [nr] ref|NP_894770.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313] gi|33635127|emb|CAE21113.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
glr0717 Blast Hits [nr] gb|ADE77071.1| unknown [Picea sitchensis]
glr0727 Blast Hits [nr] ref|ZP_05025318.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420] gi|196182042|gb|EDX77029.1| DNA ligase, NAD-dependent [Microcoleus chthonoplastes PCC 7420]
glr0874 Blast Hits [nr] ref|YP_003721893.1| hypothetical protein Aazo_2962 ['Nostoc azollae' 0708] gi|298233634|gb|ADI64770.1| conserved hypothetical protein ['Nostoc azollae' 0708]
glr1296 Blast Hits [nr] ref|YP_003264920.1| Methyltransferase type 11 [Haliangium ochraceum DSM 14365] gi|262077058|gb|ACY13027.1| Methyltransferase type 11 [Haliangium ochraceum DSM 14365]
glr1555 Blast Hits [nr] ref|YP_477061.1| hypothetical protein CYB_0817 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556841|gb|ABD01798.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
glr1768 Blast Hits [nr] ref|ZP_05024498.1| PAS fold family [Microcoleus chthonoplastes PCC 7420] gi|196182075|gb|EDX77061.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
glr1863 Blast Hits [nr] ref|YP_474033.1| OMP85 family membrane protein [Synechococcus sp. JA-3-3Ab] gi|86553812|gb|ABC98770.1| membrane protein, OMP85 family [Synechococcus sp. JA-3-3Ab]
glr2298 Blast Hits [nr] ref|ZP_05025298.1| DNA/RNA non-specific endonuclease, putative [Microcoleus chthonoplastes PCC 7420] gi|196182022|gb|EDX77009.1| DNA/RNA non-specific endonuclease, putative [Microcoleus chthonoplastes PCC 7420]
glr2323 Blast Hits [nr] ref|YP_477098.1| photosystem II protein D2 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86609194|ref|YP_477956.1| photosystem II protein D2 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502070|sp|Q2JKT8.1|PSBD_SYNJB RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein gi|86556878|gb|ABD01835.1| photosystem II protein D2 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557736|gb|ABD02693.1| photosystem II protein D2 [Synechococcus sp. JA-2-3B'a(2-13)]
glr2413 Blast Hits [nr] ref|ZP_02140770.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149] gi|161393115|gb|EDQ17441.1| glycyl-tRNA synthetase subunit beta [Roseobacter litoralis Och 149]
glr2515 Blast Hits [nr] ref|YP_477045.1| hypothetical protein CYB_0800 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556825|gb|ABD01782.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
glr2925 Blast Hits [nr] ref|YP_477068.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556848|gb|ABD01805.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
glr3237 Blast Hits [nr] ref|ZP_05030077.1| glucose-1-phosphate thymidylyltransferase [Microcoleus chthonoplastes PCC 7420] gi|196177005|gb|EDX72015.1| glucose-1-phosphate thymidylyltransferase [Microcoleus chthonoplastes PCC 7420]
glr3306 Blast Hits [nr] ref|YP_227621.1| hypothetical protein all7319 [Nostoc sp. PCC 7120] gi|17134518|dbj|BAB77077.1| all7319 [Nostoc sp. PCC 7120]
glr4337 Blast Hits [nr] ref|YP_001373187.1| hypothetical protein Oant_4770 [Ochrobactrum anthropi ATCC 49188] gi|151563863|gb|ABS17358.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
gsl1083 Blast Hits [nr] ref|YP_477099.1| cytochrome b6-f complex subunit PetM [Synechococcus sp. JA-2-3B'a(2-13)] gi|123503149|sp|Q2JN39.1|PETM_SYNJB RecName: Full=Cytochrome b6-f complex subunit 7; AltName: Full=Cytochrome b6-f complex subunit VII; AltName: Full=Cytochrome b6-f complex subunit petM gi|86556879|gb|ABD01836.1| cytochrome b6-f complex, subunit VII [Synechococcus sp. JA-2-3B'a(2-13)]
gsl2638 Blast Hits [nr] ref|YP_001665266.1| 30S ribosomal protein S16 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|241903032|ref|ZP_04787761.1| ribosomal protein S16 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256750718|ref|ZP_05491603.1| ribosomal protein S16 [Thermoanaerobacter ethanolicus CCSD1] gi|289578453|ref|YP_003477080.1| ribosomal protein S16 [Thermoanaerobacter italicus Ab9] gi|297544729|ref|YP_003677031.1| ribosomal protein S16 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|226697901|sp|B0K9W7.1|RS16_THEP3 RecName: Full=30S ribosomal protein S16 gi|166856522|gb|ABY94930.1| ribosomal protein S16 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|241884624|gb|EER83917.1| ribosomal protein S16 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256750301|gb|EEU63320.1| ribosomal protein S16 [Thermoanaerobacter ethanolicus CCSD1] gi|289528166|gb|ADD02518.1| ribosomal protein S16 [Thermoanaerobacter italicus Ab9] gi|296842504|gb|ADH61020.1| ribosomal protein S16 [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gsr2104 Blast Hits [nr] ref|YP_477028.1| hypothetical protein CYB_0782 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556808|gb|ABD01765.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
gsr2847 Blast Hits [nr] ref|YP_001329288.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C7] gi|159906215|ref|YP_001549877.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Methanococcus maripaludis C6] gi|150033024|gb|ABR65137.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C7] gi|159887708|gb|ABX02645.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein [Methanococcus maripaludis C6]
gll2105 Blast Hits [sprot] Y1857_AQUAE (sp|O67709) Protein aq_1857 OS=Aquifex aeolicus GN=aq_1857 PE=1 SV=1
gll3247 Blast Hits [sprot] SC5A7_DROME (sp|Q9VE46) High-affinity choline transporter 1 OS=Drosophila melanogaster GN=CG7708 PE=2 SV=2
glr4178 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE
Blast Hits [sprot] Y1770_SYNY3 (sp|P73627) Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803) GN=sll1770 PE=3 SV=1
glr4291 Blast Hits [TAIR_pep] AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11130762-11132984 REVERSE
Blast Hits [sprot] PP329_ARATH (sp|Q9SVH0) Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2
gll0217 Blast Hits [pln_est] gb|FG599770|FG599770 PF_T3_05R_C05_25JUL2003_043 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
gll2356 Blast Hits [pln_est] gb|FE897709|FE897709 PvEST3561 Bean pod tissue cDNA Entry Library Phaseolus vulgaris cDNA clone BE5d-748 5' similar to beta-1,3 glucanase, mRNA sequence.
gll2512 Blast Hits [pln_est] gb|CI770083|CI770083 CI770083 Oryza sativa (japonica cultivar-group) root of seedling 50ppm CuSO4 for 3days Oryza sativa Japonica Group cDNA clone J10B0059I02T3 5', mRNA sequence.
gll2582 Blast Hits [pln_est] dbj|ES790090|ES790090 061124AAWA006770CT (AAWA) Royal Gala 59 DAFB seeds Malus x domestica cDNA clone AAWAA00677, mRNA sequence.
gll2606 Blast Hits [pln_est] dbj|EL470770|EL470770 CHTS9406.b2_L23.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTS9406, mRNA sequence.
gll2707 Blast Hits [pln_est] dbj|EY767707|EY767707 CR05-C1-102-005-D12-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
gll3727 Blast Hits [pln_est] gb|CU737702|CU737702 CU737702 Phaeodactylum tricornutum Chemostat culture exposed to CO2 for 4 days Phaeodactylum tricornutum cDNA clone KS0AVA17YB11 5', mRNA sequence.
glr0104 Blast Hits [pln_est] gb|GD017704|GD017704 CCHZ7531.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ7531 5', mRNA sequence.
glr0982 Blast Hits [pln_est] gb|GH287702|GH287702 WS0464.C21_O19 SS-BD-31 Picea sitchensis cDNA clone WS0464_O19 5', mRNA sequence.
glr1502 Blast Hits [pln_est] gb|GR821940|GR821940 CBPY1770.b1 CBPY Ostreococcus sp. RCC809 high light conditions (L) Ostreococcus sp. RCC809 cDNA clone CBPY1770 5', mRNA sequence.
glr1589 Blast Hits [pln_est] gb|CT846803|CT846803 CT846803 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cDNA clone CONTIG7709, mRNA sequence.
glr1721 Blast Hits [pln_est] dbj|EL449062|EL449062 CHTM2770.b1_C21.ab1 CHT(LMS) Jerusalem artichoke Helianthus tuberosus cDNA clone CHTM2770, mRNA sequence.
glr2008 Blast Hits [pln_est] emb|AM829560|AM829560 AM829560 COL, cold overnight library Nicotiana tabacum cDNA clone nt006077003, mRNA sequence.
glr3131 Blast Hits [pln_est] gb|FE467706|FE467706 CAOS25282.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS25282 3', mRNA sequence.
glr3223 Blast Hits [pln_est] emb|AM829560|AM829560 AM829560 COL, cold overnight library Nicotiana tabacum cDNA clone nt006077003, mRNA sequence.
glr3861 Blast Hits [pln_est] gb|FE608074|FE608074 CBYX7702.b1 CBYX Panicum virgatum Kanlow callus Panicum virgatum cDNA clone CBYX7702 5', mRNA sequence.
glr4304 Blast Hits [pln_est] gb|CV782628|CV782628 FGAS077041 Triticum aestivum FGAS: Library 2 Gate 3 Triticum aestivum cDNA, mRNA sequence.
gsl3918 Blast Hits [pln_est] gb|FC507709|FC507709 CAAI9606.rev CAAI Thalassiosira pseudonana Thaps_R2 N+ 1-2kb Thalassiosira pseudonana cDNA clone CAAI9606 3', mRNA sequence.
gll0108 Blast Hits [TAIR_pep] AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | chr5:23734396-23735495 FORWARD
gll0180 Blast Hits [TAIR_pep] AT1G20340.1 | Symbols: DRT112, PETE2 | DRT112; copper ion binding / electron carrier | chr1:7042770-7043273 REVERSE
gll0241 Blast Hits [TAIR_pep] AT3G02770.1 | Symbols: | dimethylmenaquinone methyltransferase family protein | chr3:601017-601884 REVERSE
gll0331 Blast Hits [TAIR_pep] AT4G26770.1 | Symbols: | phosphatidate cytidylyltransferase/ transferase, transferring phosphorus-containing groups | chr4:13482580-13484697 FORWARD
gll0502 Blast Hits [TAIR_pep] AT4G10260.1 | Symbols: | pfkB-type carbohydrate kinase family protein | chr4:6371486-6372770 REVERSE
gll0560 Blast Hits [TAIR_pep] AT2G42500.1 | Symbols: PP2A-4 | PP2A-4; hydrolase/ protein serine/threonine phosphatase | chr2:17698099-17701226 REVERSE
gll0886 Blast Hits [TAIR_pep] AT4G26770.1 | Symbols: | phosphatidate cytidylyltransferase/ transferase, transferring phosphorus-containing groups | chr4:13482580-13484697 FORWARD
gll1126 Blast Hits [TAIR_pep] AT4G33390.1 | Symbols: | unknown protein | chr4:16075282-16077706 FORWARD
gll1172 Blast Hits [TAIR_pep] AT1G65810.1 | Symbols: | tRNA-splicing endonuclease positive effector-related | chr1:24477043-24480728 REVERSE
gll1468 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE
gll1670 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
gll1700 Blast Hits [TAIR_pep] AT5G44000.1 | Symbols: | glutathione S-transferase C-terminal domain-containing protein | chr5:17702231-17703934 REVERSE
gll1761 Blast Hits [TAIR_pep] AT1G50770.1 | Symbols: | unknown protein | chr1:18818559-18820503 REVERSE
gll1783 Blast Hits [TAIR_pep] AT2G39770.1 | Symbols: CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | chr2:16589401-16590741 FORWARD
gll1836 Blast Hits [TAIR_pep] AT4G01800.1 | Symbols: | preprotein translocase secA subunit, putative | chr4:770926-776131 REVERSE
gll2133 Blast Hits [TAIR_pep] AT1G57770.1 | Symbols: | amine oxidase family | chr1:21395254-21398135 FORWARD
gll2173 Blast Hits [TAIR_pep] AT1G19580.1 | Symbols: GAMMA CA1 | GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase | chr1:6774937-6777092 FORWARD
gll2183 Blast Hits [TAIR_pep] AT1G74910.2 | Symbols: | ADP-glucose pyrophosphorylase family protein | chr1:28135770-28138456 REVERSE
gll2185 Blast Hits [TAIR_pep] AT2G39770.1 | Symbols: CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | chr2:16589401-16590741 FORWARD
gll2208 Blast Hits [TAIR_pep] AT2G39770.1 | Symbols: CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | chr2:16589401-16590741 FORWARD
gll2254 Blast Hits [TAIR_pep] AT4G03430.1 | Symbols: STA1, EMB2770 | EMB2770 (EMBRYO DEFECTIVE 2770); RNA splicing factor, transesterification mechanism | chr4:1517411-1520500 REVERSE
gll2335 Blast Hits [TAIR_pep] AT4G36530.2 | Symbols: | hydrolase, alpha/beta fold family protein | chr4:17240120-17241770 REVERSE
gll2530 Blast Hits [TAIR_pep] AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding | chr4:12766223-12767952 REVERSE
gll2645 Blast Hits [TAIR_pep] AT3G17770.1 | Symbols: | dihydroxyacetone kinase family protein | chr3:6081973-6085957 REVERSE
gll2741 Blast Hits [TAIR_pep] AT2G40770.1 | Symbols: | ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding | chr2:17013535-17021315 REVERSE
gll2910 Blast Hits [TAIR_pep] ATCG00150.1 | Symbols: ATPI | Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex. | chrC:14021-14770 REVERSE
gll3109 Blast Hits [TAIR_pep] AT4G27700.1 | Symbols: | rhodanese-like domain-containing protein | chr4:13826541-13827673 REVERSE
gll3248 Blast Hits [TAIR_pep] AT5G20040.2 | Symbols: ATIPT9 | ATIPT9; ATP binding / tRNA isopentenyltransferase | chr5:6767939-6770980 REVERSE
gll3278 Blast Hits [TAIR_pep] AT3G06350.1 | Symbols: EMB3004, MEE32 | MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | chr3:1924536-1927701 REVERSE
gll3366 Blast Hits [TAIR_pep] AT3G07700.2 | Symbols: | ABC1 family protein | chr3:2459696-2463241 REVERSE
gll3402 Blast Hits [TAIR_pep] AT5G41770.1 | Symbols: | crooked neck protein, putative / cell cycle protein, putative | chr5:16718021-16720936 FORWARD
gll3612 Blast Hits [TAIR_pep] AT5G51080.2 | Symbols: | RNase H domain-containing protein | chr5:20769022-20770675 REVERSE
gll3617 Blast Hits [TAIR_pep] AT5G01770.1 | Symbols: RAPTOR1A, ATRAPTOR1A, RAPTOR2 | RAPTOR2 (RAPTOR2); binding / nucleotide binding | chr5:294539-301773 REVERSE
gll3709 Blast Hits [TAIR_pep] AT1G71770.1 | Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor | chr1:26990777-26993447 REVERSE
gll3862 Blast Hits [TAIR_pep] AT5G43930.3 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD
gll3869 Blast Hits [TAIR_pep] AT4G11640.1 | Symbols: ATSR | ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE); serine racemase | chr4:7021770-7023252 FORWARD
gll3913 Blast Hits [TAIR_pep] ATCG00770.1 | Symbols: RPS8 | chloroplast 30S ribosomal protein S8 | chrC:80068-80472 REVERSE
gll3938 Blast Hits [TAIR_pep] AT3G57770.1 | Symbols: | protein kinase, putative | chr3:21397542-21398421 FORWARD
gll4044 Blast Hits [TAIR_pep] AT1G67700.1 | Symbols: | unknown protein | chr1:25374295-25375716 FORWARD
gll4055 Blast Hits [TAIR_pep] AT1G06925.1 | Symbols: | unknown protein | chr1:2127704-2128611 REVERSE
gll4271 Blast Hits [TAIR_pep] AT2G07706.1 | Symbols: | unknown protein | chr2:3382413-3384226 REVERSE
glr0134 Blast Hits [TAIR_pep] AT3G17770.1 | Symbols: | dihydroxyacetone kinase family protein | chr3:6081973-6085957 REVERSE
glr0185 Blast Hits [TAIR_pep] AT1G69770.1 | Symbols: CMT3 | CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase | chr1:26248496-26253519 REVERSE
glr0220 Blast Hits [TAIR_pep] AT1G10600.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16144.1); Has 771 Blast hits to 770 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 366; Fungi - 201; Plants - 115; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | chr1:3503765-3505190 FORWARD
glr0251 Blast Hits [TAIR_pep] AT2G45770.1 | Symbols: CPFTSY, FRD4 | CPFTSY; 7S RNA binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding | chr2:18851248-18853402 FORWARD
glr0255 Blast Hits [TAIR_pep] AT5G45050.2 | Symbols: TTR1, ATWRKY16, WRKY16 | TTR1; protein binding / transcription factor | chr5:18177016-18181805 REVERSE
glr0353 Blast Hits [TAIR_pep] AT3G14110.2 | Symbols: FLU | FLU (FLUORESCENT IN BLUE LIGHT); binding | chr3:4676222-4677010 REVERSE
glr0443 Blast Hits [TAIR_pep] AT2G39770.1 | Symbols: CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | chr2:16589401-16590741 FORWARD
glr0466 Blast Hits [TAIR_pep] AT2G01770.1 | Symbols: VIT1 | VIT1 (vacuolar iron transporter 1); iron ion transmembrane transporter | chr2:334775-336425 REVERSE
glr0469 Blast Hits [TAIR_pep] AT2G39770.1 | Symbols: CYT1, VTC1, SOZ1, EMB101, GMP1 | CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | chr2:16589401-16590741 FORWARD
glr0543 Blast Hits [TAIR_pep] AT1G16860.1 | Symbols: | merozoite surface protein-related | chr1:5768280-5770183 FORWARD
glr0734 Blast Hits [TAIR_pep] AT2G38770.1 | Symbols: EMB2765 | EMB2765 (EMBRYO DEFECTIVE 2765) | chr2:16203185-16210253 REVERSE
glr1230 Blast Hits [TAIR_pep] AT3G03770.1 | Symbols: | leucine-rich repeat transmembrane protein kinase, putative | chr3:945303-948436 REVERSE
glr1365 Blast Hits [TAIR_pep] AT5G23010.1 | Symbols: MAM1, IMS3 | MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synthase | chr5:7703173-7706769 FORWARD
glr1370 Blast Hits [TAIR_pep] AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1 | ATABC1 (ATP BINDING CASSETTE PROTEIN 1); ATPase, coupled to transmembrane movement of substances / protein binding / transporter | chr4:2427998-2429785 REVERSE
glr1446 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
glr1529 Blast Hits [TAIR_pep] AT1G01090.1 | Symbols: PDH-E1 ALPHA | PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) | chr1:47705-49166 REVERSE
glr1646 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
glr1722 Blast Hits [TAIR_pep] AT3G07770.1 | Symbols: | ATP binding | chr3:2479611-2483970 FORWARD
glr1981 Blast Hits [TAIR_pep] AT1G08830.2 | Symbols: CSD1 | CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); superoxide dismutase | chr1:2827700-2829053 FORWARD
glr2391 Blast Hits [TAIR_pep] AT5G39410.1 | Symbols: | binding / catalytic | chr5:15768415-15770274 REVERSE
glr2485 Blast Hits [TAIR_pep] AT3G04890.1 | Symbols: | unknown protein | chr3:1347708-1349066 FORWARD
glr2496 Blast Hits [TAIR_pep] AT1G04470.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33420.1); Has 116 Blast hits to 109 proteins in 23 species: Archae - 0; Bacteria - 1; Metazoa - 4; Fungi - 4; Plants - 95; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | chr1:1211177-1214591 REVERSE
glr2844 Blast Hits [TAIR_pep] AT1G01090.1 | Symbols: PDH-E1 ALPHA | PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) | chr1:47705-49166 REVERSE
glr2986 Blast Hits [TAIR_pep] AT5G61770.1 | Symbols: PPAN | PPAN (PETER PAN-LIKE PROTEIN) | chr5:24815888-24817495 FORWARD
glr3089 Blast Hits [TAIR_pep] AT4G32770.1 | Symbols: VTE1, ATSDX1 | VTE1 (VITAMIN E DEFICIENT 1); tocopherol cyclase | chr4:15804981-15807790 FORWARD
glr3170 Blast Hits [TAIR_pep] AT2G30770.1 | Symbols: CYP71A13 | CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13); indoleacetaldoxime dehydratase/ oxygen binding | chr2:13109909-13112006 REVERSE
glr3243 Blast Hits [TAIR_pep] AT5G35770.1 | Symbols: SAP | SAP (STERILE APETALA); transcription factor/ transcription regulator | chr5:13936457-13940786 REVERSE
glr3411 Blast Hits [TAIR_pep] AT4G04770.1 | Symbols: ATABC1, LAF6, ATNAP1 | ATABC1 (ATP BINDING CASSETTE PROTEIN 1); ATPase, coupled to transmembrane movement of substances / protein binding / transporter | chr4:2427998-2429785 REVERSE
glr3733 Blast Hits [TAIR_pep] AT1G60770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:22366959-22368648 REVERSE
glr3842 Blast Hits [TAIR_pep] AT4G24680.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BAT2, N-terminal (InterPro:IPR009738); Has 6700 Blast hits to 3976 proteins in 401 species: Archae - 2; Bacteria - 590; Metazoa - 2482; Fungi - 634; Plants - 203; Viruses - 19; Other Eukaryotes - 2770 (source: NCBI BLink). | chr4:12733425-12739737 FORWARD
glr4217 Blast Hits [TAIR_pep] AT2G38770.1 | Symbols: EMB2765 | EMB2765 (EMBRYO DEFECTIVE 2765) | chr2:16203185-16210253 REVERSE
glr4402 Blast Hits [TAIR_pep] AT4G25080.2 | Symbols: CHLM | CHLM (magnesium-protoporphyrin IX methyltransferase); magnesium protoporphyrin IX methyltransferase | chr4:12877015-12878128 FORWARD
gsl1139 Blast Hits [TAIR_pep] AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:4772881-4775697 REVERSE
gsl2101 Blast Hits [TAIR_pep] AT2G01755.1 | Symbols: | unknown protein | chr2:332249-332770 REVERSE
gsl2339 Blast Hits [TAIR_pep] AT5G35600.1 | Symbols: HDA7 | HDA7 (histone deacetylase7); histone deacetylase | chr5:13770121-13771712 REVERSE
gsl3590 Blast Hits [TAIR_pep] AT5G45050.2 | Symbols: TTR1, ATWRKY16, WRKY16 | TTR1; protein binding / transcription factor | chr5:18177016-18181805 REVERSE
gsl4037 Blast Hits [TAIR_pep] AT5G20040.2 | Symbols: ATIPT9 | ATIPT9; ATP binding / tRNA isopentenyltransferase | chr5:6767939-6770980 REVERSE
gsr2711 Blast Hits [TAIR_pep] AT1G80770.1 | Symbols: PDE318 | PDE318 (pigment defective 318); GTP binding | chr1:30355266-30357786 FORWARD
gsr2734 Blast Hits [TAIR_pep] AT5G43930.3 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:17677047-17680577 FORWARD

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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