in ?
cyanobase » Gloeobacter violaceus PCC 7421 » genes » search

Full-text search result: 165 genes by "428" TXT SET

Gloeobacter violaceus PCC 7421 (165 genes ) TXT SET

gll0203 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll0378 InterPro IPR006365 Cobalamin (vitamin B12) biosynthesis CobL, precorrin-6Y C5,15-methyltransferase; HMMPIR:PIRSF036428 CobL
gll0929 InterPro IPR011151 Histidine triad motif; Gene3D:G3DSA:3.30.428.10 His_triad_motif
gll1057 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll1334 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll1428 Gene product ABC-transporter membrane fusion protein DevB homolog
Function Transport and binding proteins: Transport and binding proteins
GO term Biological Process: protein secretion (GO:0009306)
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: protein transporter activity (GO:0008565)
InterPro IPR006143 Secretion protein HlyD; HMMPfam:PF00529 HlyD
InterPro IPR014315 ABC transporter membrane fusion protein, DevB type; HMMTigr:TIGR02971 heterocyst_DevB
InterPro NULL NULL; superfamily:SSF111369 SSF111369
Blast Hits [TAIR_pep] AT3G01100.1 | Symbols: HYP1, ATHYP1 | HYP1 (HYPOTHETICAL PROTEIN 1) | chr3:35013-38176 REVERSE
Blast Hits [nr] ref|NP_923433.1| permease protein DevB-like protein [Gloeobacter violaceus PCC 7421] gi|35211048|dbj|BAC88428.1| gll0487 [Gloeobacter violaceus PCC 7421]
Blast Hits [pln_est] gb|FG965979|FG965979 MA_LYP9_04763 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA sequence.
Blast Hits [sprot] YBHG_YERPE (sp|Q93AA7) UPF0194 membrane protein YP_0975 OS=Yersinia pestis GN=YP_0975 PE=3 SV=2
gll1739 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll0428 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Molecular Function: structural molecule activity (GO:0005198)
InterPro IPR010667 Phage T4-like virus tail tube gp19; HMMPfam:PF06841 Phage_T4_gp19
InterPro IPR011747 Conserved hypothetical protein CHP02241, phage tail region protein; HMMTigr:TIGR02241 CHP2241_phage
Blast Hits [TAIR_pep] AT2G44470.1 | Symbols: BGLU29 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | chr2:18354258-18357304 FORWARD
Blast Hits [nr] ref|ZP_05023948.1| conserved hypothetical phage tail region protein [Microcoleus chthonoplastes PCC 7420] gi|196183204|gb|EDX78188.1| conserved hypothetical phage tail region protein [Microcoleus chthonoplastes PCC 7420]
gll0669 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll1891 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll2225 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll2428 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
InterPro IPR005149 Transcription regulator PadR N-terminal-like; HMMPfam:PF03551 PadR
InterPro IPR011991 Winged helix-turn-helix transcription repressor DNA-binding; Gene3D:G3DSA:1.10.10.10 Wing_hlx_DNA_bd
InterPro NULL NULL; superfamily:SSF46785 SSF46785
Blast Hits [TAIR_pep] AT1G48760.3 | Symbols: delta-ADR | delta-ADR (delta-adaptin); binding / clathrin binding / protein binding / protein transporter | chr1:18036652-18039261 REVERSE
Blast Hits [nr] ref|NP_924148.1| hypothetical protein gll1202 [Gloeobacter violaceus PCC 7421] gi|35211766|dbj|BAC89143.1| gll1202 [Gloeobacter violaceus PCC 7421]
Blast Hits [pln_est] gb|CU513858|CU513858 CU513858 ROOTS_KZ0ABF Theobroma cacao cDNA clone KZ0ABF2YB07FM1, mRNA sequence.
Blast Hits [sprot] YX_BACSH (sp|P39044) Uncharacterized protein X OS=Bacillus sphaericus GN=X PE=4 SV=1
gll2708 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll3008 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll3441 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll4071 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll4225 InterPro IPR004568 Phosphopantethiene-protein transferase; BlastProDom:PD004282 PPantethiene-prot_Trfase
gll4281 Gene product ABC transporter ATP-binding protein
Function Transport and binding proteins: Transport and binding proteins
GO term Molecular Function: ATP binding (GO:0005524)
GO term Molecular Function: ATPase activity (GO:0016887)
GO term Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
GO term Molecular Function: nucleotide binding (GO:0000166)
InterPro IPR003439 ABC transporter-like; HMMPfam:PF00005 ABC_tran
InterPro IPR003439 ABC transporter-like; ProfileScan:PS50893 ABC_TRANSPORTER_2
InterPro IPR003593 ATPase, AAA+ type, core; HMMSmart:SM00382 AAA
InterPro IPR017871 ABC transporter, conserved site; PatternScan:PS00211 ABC_TRANSPORTER_1
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.300 G3DSA:3.40.50.300
InterPro NULL NULL; HMMPanther:PTHR19222 PTHR19222
InterPro NULL NULL; HMMPanther:PTHR19222:SF49 PTHR19222:SF49
InterPro NULL NULL; superfamily:SSF52540 SSF52540
Blast Hits [TAIR_pep] AT1G67940.1 | Symbols: ATNAP3 | ATNAP3; transporter | chr1:25477805-25478667 FORWARD
Blast Hits [nr] ref|YP_001548795.1| ABC transporter related [Methanococcus maripaludis C6] gi|159886626|gb|ABX01563.1| ABC transporter related [Methanococcus maripaludis C6]
Blast Hits [pln_est] gb|CN656112|CN656112 LCM003O_H06_T3_P06_15 LCM003 library Glycine max cDNA 5', mRNA sequence.
Blast Hits [sprot] CYSA_CHLVU (sp|P56344) Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Chlorella vulgaris GN=cysA PE=3 SV=1
gll4282 Gene product ABC transporter permease protein
Function Transport and binding proteins: Transport and binding proteins
GO term Biological Process: molybdate ion transport (GO:0015689)
GO term Biological Process: transport (GO:0006810)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: molybdate ion transmembrane transporter activity (GO:0015098)
GO term Molecular Function: transporter activity (GO:0005215)
InterPro IPR000515 Binding-protein-dependent transport systems inner membrane component; HMMPfam:PF00528 BPD_transp_1
InterPro IPR000515 Binding-protein-dependent transport systems inner membrane component; ProfileScan:PS50928 ABC_TM1
InterPro IPR011867 Molybdate ABC transporter, permease protein; HMMTigr:TIGR02141 modB_ABC
Blast Hits [TAIR_pep] AT5G04930.1 | Symbols: ALA1 | ALA1 (aminophospholipid ATPase1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | chr5:1445509-1449568 FORWARD
Blast Hits [nr] ref|YP_003542977.1| molybdate ABC transporter, inner membrane subunit [Methanohalophilus mahii DSM 5219] gi|292667483|gb|ADE37332.1| molybdate ABC transporter, inner membrane subunit [Methanohalophilus mahii DSM 5219]
Blast Hits [pln_est] gb|CA917143|CA917143 EST641290 GPOD Medicago truncatula cDNA clone GPOD-35C16, mRNA sequence.
Blast Hits [sprot] MODB_HAEIN (sp|P45322) Molybdenum transport system permease protein modB OS=Haemophilus influenzae GN=modB PE=3 SV=1
gll4283 Gene product ABC transporter ATP-binding protein
Function Transport and binding proteins: Transport and binding proteins
GO term Biological Process: molybdate ion transport (GO:0015689)
GO term Biological Process: transport (GO:0006810)
GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
GO term Molecular Function: molybdate transmembrane-transporting ATPase activity (GO:0015412)
GO term Molecular Function: transporter activity (GO:0005215)
InterPro IPR005950 Molybdenum ABC transporter, periplasmic binding protein; HMMTigr:TIGR01256 modA
InterPro IPR006059 Bacterial extracellular solute-binding, family 1; HMMPfam:PF01547 SBP_bac_1
InterPro NULL NULL; Gene3D:G3DSA:3.40.190.10 G3DSA:3.40.190.10
InterPro NULL NULL; ProfileScan:PS51257 PROKAR_LIPOPROTEIN
InterPro NULL NULL; superfamily:SSF53850 SSF53850
Blast Hits [TAIR_pep] AT5G10610.1 | Symbols: CYP81K1 | CYP81K1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:3353518-3355020 FORWARD
Blast Hits [nr] ref|YP_002380213.1| molybdenum ABC transporter, periplasmic molybdate-binding protein [Cyanothece sp. PCC 7424] gi|218174612|gb|ACK73345.1| molybdenum ABC transporter, periplasmic molybdate-binding protein [Cyanothece sp. PCC 7424]
Blast Hits [pln_est] gb|BI263343|BI263343 NF089D09PL1F1078 Phosphate starved leaf Medicago truncatula cDNA clone NF089D09PL 5', mRNA sequence.
Blast Hits [sprot] YVGL_BACSU (sp|O32208) Putative ABC transporter substrate-binding lipoprotein yvgL OS=Bacillus subtilis GN=yvgL PE=3 SV=1
gll4285 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Biological Process: proteolysis (GO:0006508)
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
InterPro IPR000905 Peptidase M22, glycoprotease; HMMPfam:PF00814 Peptidase_M22
InterPro NULL NULL; HMMTigr:TIGR03725 Bact_YeaZ
InterPro NULL NULL; superfamily:SSF53067 SSF53067
Blast Hits [TAIR_pep] AT2G45270.1 | Symbols: | glycoprotease M22 family protein | chr2:18666583-18669332 FORWARD
Blast Hits [nr] ref|YP_476692.1| glycoprotease family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556472|gb|ABD01429.1| glycoprotease family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [pln_est] gb|GT798306|GT798306 CCXG8985.b1 CCXG Brachypodium distachyon superpool Brachypodium distachyon cDNA clone CCXG8985 5', mRNA sequence.
Blast Hits [sprot] YDIC_BACSU (sp|O05516) Uncharacterized protein ydiC OS=Bacillus subtilis GN=ydiC PE=3 SV=1
gll4286 Gene product probable aldolase
Function Energy metabolism: Glycolysis
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR001303 Class II aldolase/adducin, N-terminal; Gene3D:G3DSA:3.40.225.10 Aldolase_II/adducin_N
InterPro IPR001303 Class II aldolase/adducin, N-terminal; HMMPfam:PF00596 Aldolase_II
InterPro IPR001303 Class II aldolase/adducin, N-terminal; superfamily:SSF53639 Aldolase_II_N
InterPro NULL NULL; HMMPanther:PTHR10672 PTHR10672
InterPro NULL NULL; HMMPanther:PTHR10672:SF1 PTHR10672:SF1
Blast Hits [TAIR_pep] AT3G25710.1 | Symbols: BHLH32, ATAIG1 | BHLH32 (BASIC HELIX-LOOP-HELIX 32); DNA binding / transcription factor | chr3:9369598-9371096 FORWARD
Blast Hits [nr] ref|ZP_01619438.1| hypothetical protein L8106_06384 [Lyngbya sp. PCC 8106] gi|119457281|gb|EAW38406.1| hypothetical protein L8106_06384 [Lyngbya sp. PCC 8106]
Blast Hits [pln_est] gb|CO212029|CO212029 WS00923.B21_N22 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00923_N22 3', mRNA sequence.
Blast Hits [sprot] MUG14_SCHPO (sp|Q9P5M9) Meiotically up-regulated gene 14 protein OS=Schizosaccharomyces pombe GN=mug14 PE=1 SV=1
gll4359 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr0220 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll3664 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll3762 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
gll3948 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
Blast Hits [nr] ref|ZP_03132457.1| putative RNA polymerase, sigma-24 subunit, ECF subfamily [Chthoniobacter flavus Ellin428] gi|196222286|gb|EDY16815.1| putative RNA polymerase, sigma-24 subunit, ECF subfamily [Chthoniobacter flavus Ellin428]
glr0504 InterPro IPR007383 Protein of unknown function DUF445, transmembrane; HMMPfam:PF04286 DUF445
glr0723 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr0944 InterPro NULL NULL; superfamily:SSF64288 SSF64288
glr1090 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr1158 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr1230 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr1764 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr2231 InterPro IPR001708 Membrane insertion protein, OxaA/YidC; HMMPanther:PTHR12428 Innermemb_insert
InterPro NULL NULL; HMMPanther:PTHR12428:SF4 PTHR12428:SF4
glr2572 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr2668 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr2851 InterPro IPR004568 Phosphopantethiene-protein transferase; BlastProDom:PD004282 PPantethiene-prot_Trfase
glr2894 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr3428 Gene product 4-hydroxybenzoate-octaprenyl transferase
Gene symbol ubiA
Function Biosynthesis of cofactors, prosthetic groups, and carriers: Menaquinone and ubiquinone
GO term Biological Process: biosynthetic process (GO:0009058)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Molecular Function: prenyltransferase activity (GO:0004659)
InterPro IPR000537 UbiA prenyltransferase; HMMPfam:PF01040 UbiA
InterPro IPR000537 UbiA prenyltransferase; PatternScan:PS00943 UBIA
InterPro IPR006370 4-hydroxybenzoate polyprenyl transferase; HMMTigr:TIGR01474 ubiA_proteo
InterPro NULL NULL; HMMPanther:PTHR11048 PTHR11048
InterPro NULL NULL; HMMPanther:PTHR11048:SF2 PTHR11048:SF2
Blast Hits [TAIR_pep] AT4G23660.2 | Symbols: AtPPT1 | AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1); 4-hydroxybenzoate nonaprenyltransferase | chr4:12328086-12331359 REVERSE
Blast Hits [nr] ref|YP_474490.1| prenyltransferase [Synechococcus sp. JA-3-3Ab] gi|86554269|gb|ABC99227.1| 4-hydroxybenzoate polyprenyl transferase [Synechococcus sp. JA-3-3Ab]
Blast Hits [pln_est] gb|FG605173|FG605173 PF_T3_75R_D04_04SEP2003_026 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] UBIA_SHEPA (sp|A8GZR0) 4-hydroxybenzoate octaprenyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiA PE=3 SV=1
glr3584 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr4008 InterPro IPR004568 Phosphopantethiene-protein transferase; BlastProDom:PD004282 PPantethiene-prot_Trfase
glr4280 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Biological Process: metal ion transport (GO:0030001)
GO term Biological Process: transmembrane transport (GO:0055085)
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: metal ion transmembrane transporter activity (GO:0046873)
InterPro IPR003689 Zinc/iron permease; HMMPfam:PF02535 Zip
InterPro NULL NULL; HMMPanther:PTHR11065 PTHR11065
Blast Hits [TAIR_pep] AT3G08650.2 | Symbols: | metal transporter family protein | chr3:2624694-2627308 REVERSE
Blast Hits [nr] ref|YP_477792.1| zinc/iron ABC transporter permease [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557572|gb|ABD02529.1| metal cation transporter, zinc (Zn2+)-Iron (Fe2+) permease (ZIP) family [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [pln_est] dbj|DR820689|DR820689 ZM_BFb0059G02.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
Blast Hits [sprot] GUFA_MYXXA (sp|Q06916) Protein gufA OS=Myxococcus xanthus GN=gufA PE=4 SV=1
glr4287 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
InterPro IPR009472 Protein of unknown function DUF1092; HMMPfam:PF06485 DUF1092
Blast Hits [TAIR_pep] AT3G08010.1 | Symbols: ATAB2 | ATAB2; RNA binding | chr3:2556046-2557426 FORWARD
Blast Hits [nr] ref|YP_170757.1| hypothetical protein syc0047_c [Synechococcus elongatus PCC 6301] gi|81300399|ref|YP_400607.1| hypothetical protein Synpcc7942_1590 [Synechococcus elongatus PCC 7942] gi|7328458|dbj|BAA92865.1| ORF285 [Synechococcus elongatus PCC 6301] gi|22002499|gb|AAM82651.1| unknown [Synechococcus elongatus PCC 7942] gi|56685015|dbj|BAD78237.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169280|gb|ABB57620.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Blast Hits [pln_est] dbj|DW482663|DW482663 GH_RMIRS_037_F01_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA sequence.
Blast Hits [sprot] ASTB_YERE8 (sp|A1JS35) N-succinylarginine dihydrolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=astB PE=3 SV=1
glr4289 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Molecular Function: ATP binding (GO:0005524)
GO term Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
GO term Molecular Function: nucleotide binding (GO:0000166)
InterPro IPR003593 ATPase, AAA+ type, core; HMMSmart:SM00382 AAA
InterPro IPR003959 ATPase, AAA-type, core; HMMPfam:PF00004 AAA
InterPro NULL NULL; Gene3D:G3DSA:1.10.8.60 G3DSA:1.10.8.60
InterPro NULL NULL; Gene3D:G3DSA:3.40.50.300 G3DSA:3.40.50.300
InterPro NULL NULL; HMMPanther:PTHR23077 PTHR23077
InterPro NULL NULL; superfamily:SSF52540 SSF52540
Blast Hits [TAIR_pep] AT5G03340.1 | Symbols: | cell division cycle protein 48, putative / CDC48, putative | chr5:810091-813133 REVERSE
Blast Hits [nr] ref|NP_926205.1| hypothetical protein gll3259 [Gloeobacter violaceus PCC 7421] gi|35213830|dbj|BAC91200.1| gll3259 [Gloeobacter violaceus PCC 7421]
Blast Hits [pln_est] dbj|EG392604|EG392604 BG01028A1H07.f1 BG01 - normalized library Leymus cinereus x Leymus triticoides cDNA clone BG01028A1H07.f1, mRNA sequence.
Blast Hits [sprot] YCF46_GUITH (sp|O78439) Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1
glr4357 InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
glr4428 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
GO term Biological Process: oxidation reduction (GO:0055114)
GO term Molecular Function: oxidoreductase activity (GO:0016491)
GO term Molecular Function: transition metal ion binding (GO:0046914)
InterPro IPR009078 Ferritin/ribonucleotide reductase-like; superfamily:SSF47240 Ferritin/RR_like
Blast Hits [TAIR_pep] AT5G15480.1 | Symbols: | zinc finger (C2H2 type) family protein | chr5:5025952-5027160 REVERSE
Blast Hits [nr] ref|NP_923127.1| hypothetical protein gll0181 [Gloeobacter violaceus PCC 7421] gi|35210741|dbj|BAC88122.1| gll0181 [Gloeobacter violaceus PCC 7421]
Blast Hits [pln_est] gb|CV032092|CV032092 RTNACL1_5_G03.g2_A029 Roots plus added NaCl Pinus taeda cDNA clone RTNACL1_5_G03_A029 5', mRNA sequence.
Blast Hits [sprot] XRN1_HUMAN (sp|Q8IZH2) 5'-3' exoribonuclease 1 OS=Homo sapiens GN=XRN1 PE=1 SV=1
gsl0402 InterPro IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp; superfamily:SSF54285 Mo_synth/thiamin_syn_S_b-grasp
gsl2061 InterPro IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp; superfamily:SSF54285 Mo_synth/thiamin_syn_S_b-grasp
gsl3413 InterPro IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp; superfamily:SSF54285 Mo_synth/thiamin_syn_S_b-grasp
gsl4284 Gene product ABC transporter solute-binding protein
Function Transport and binding proteins: Transport and binding proteins
GO term Biological Process: transport (GO:0006810)
GO term Cellular Component: ATP-binding cassette (ABC) transporter complex (GO:0043190)
GO term Molecular Function: ATP binding (GO:0005524)
GO term Molecular Function: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)
GO term Molecular Function: molybdate transmembrane-transporting ATPase activity (GO:0015412)
GO term Molecular Function: molybdenum ion binding (GO:0030151)
GO term Molecular Function: transporter activity (GO:0005215)
InterPro IPR004606 Molybdenum-pterin binding; HMMTigr:TIGR00638 Mop
InterPro IPR005116 Transport-associated OB, type 1; HMMPfam:PF03459 TOBE
InterPro IPR008995 Molybdate/tungstate binding; superfamily:SSF50331 MOP_like
InterPro NULL NULL; Gene3D:G3DSA:2.40.50.100 G3DSA:2.40.50.100
Blast Hits [TAIR_pep] AT1G47550.1 | Symbols: | unknown protein | chr1:17457171-17463896 FORWARD
Blast Hits [nr] ref|YP_686196.1| molybdopterin-binding protein [uncultured methanogenic archaeon RC-I] gi|110621592|emb|CAJ36870.1| molybdopterin-binding protein [uncultured methanogenic archaeon RC-I]
Blast Hits [sprot] MOP1_CLOPA (sp|P04952) Molybdenum-pterin-binding protein 1 OS=Clostridium pasteurianum GN=mopI PE=4 SV=2
gsr4366 InterPro IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp; superfamily:SSF54285 Mo_synth/thiamin_syn_S_b-grasp
glr4288 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
Blast Hits [TAIR_pep] AT4G25230.2 | Symbols: RIN2 | RIN2 (RPM1 INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | chr4:12924446-12928671 FORWARD
Blast Hits [nr] ref|ZP_03273926.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209494236|gb|EDZ94550.1| conserved hypothetical protein [Arthrospira maxima CS-328]
Blast Hits [sprot] DYHC2_CHLRE (sp|Q9SMH5) Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii GN=DHC1B PE=1 SV=2
gll4194 GO term Molecular Function: protein homodimerization activity (GO:0042803)
gll3651 GO term Biological Process: isoleucyl-tRNA aminoacylation (GO:0006428)
gll0053 Blast Hits [nr] ref|ZP_01464935.1| proteinase [Stigmatella aurantiaca DW4/3-1] gi|115365238|gb|EAU64282.1| proteinase [Stigmatella aurantiaca DW4/3-1]
gll0160 Blast Hits [nr] ref|YP_002481243.1| ribosomal protein S20 [Cyanothece sp. PCC 7425] gi|254813108|sp|B8HTW2.1|RS20_CYAP4 RecName: Full=30S ribosomal protein S20 gi|219862543|gb|ACL42882.1| ribosomal protein S20 [Cyanothece sp. PCC 7425]
gll0198 Blast Hits [nr] gb|ACN42852.1| putative actinorhodopsin [actinobacterium MWH-EgelM2-3.D6]
gll0487 Blast Hits [nr] ref|NP_924374.1| hypothetical protein gll1428 [Gloeobacter violaceus PCC 7421] gi|35211993|dbj|BAC89369.1| gll1428 [Gloeobacter violaceus PCC 7421]
gll0579 Blast Hits [nr] ref|YP_003704825.1| transport system permease protein [Truepera radiovictrix DSM 17093] gi|297164571|gb|ADI14282.1| transport system permease protein [Truepera radiovictrix DSM 17093]
gll0683 Blast Hits [nr] ref|ZP_03130153.1| protein of unknown function DUF72 [Chthoniobacter flavus Ellin428] gi|196224630|gb|EDY19141.1| protein of unknown function DUF72 [Chthoniobacter flavus Ellin428]
gll0766 Blast Hits [nr] ref|YP_003722428.1| hypothetical protein Aazo_3768 ['Nostoc azollae' 0708] gi|298234169|gb|ADI65305.1| conserved hypothetical protein ['Nostoc azollae' 0708]
gll1037 Blast Hits [nr] ref|ZP_03129105.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428] gi|196225839|gb|EDY20346.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
gll1049 Blast Hits [nr] ref|YP_003009986.1| hypothetical protein Pjdr2_1223 [Paenibacillus sp. JDR-2] gi|247542881|gb|ACS99899.1| hypothetical protein Pjdr2_1223 [Paenibacillus sp. JDR-2]
gll1110 Blast Hits [nr] gb|AAO64428.1| long chain N-acyltyrosine synthase [uncultured bacterium]
gll1353 Blast Hits [nr] ref|ZP_05966436.2| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM 20093] gi|270276574|gb|EFA22428.1| 16S rRNA methyltransferase GidB [Bifidobacterium gallicum DSM 20093]
gll1584 Blast Hits [nr] ref|NP_442814.1| NADH dehydrogenase subunit H [Synechocystis sp. PCC 6803] gi|417389|sp|P26522.2|NU1C_SYNY3 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 1; AltName: Full=NAD(P)H dehydrogenase I subunit 1; AltName: Full=NDH-1 subunit 1; AltName: Full=NDH-A gi|47555|emb|CAA44374.1| NDHA [Synechocystis sp. PCC 6803] gi|1001395|dbj|BAA10885.1| NADH dehydrogenase subunit 1 [Synechocystis sp. PCC 6803]
gll1779 Blast Hits [nr] ref|NP_926653.1| hypothetical protein gll3707 [Gloeobacter violaceus PCC 7421] gi|35214280|dbj|BAC91648.1| gll3707 [Gloeobacter violaceus PCC 7421]
gll1780 Blast Hits [nr] ref|NP_926654.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Gloeobacter violaceus PCC 7421] gi|35214281|dbj|BAC91649.1| gll3708 [Gloeobacter violaceus PCC 7421]
gll1781 Blast Hits [nr] ref|NP_926655.1| hypothetical protein gll3709 [Gloeobacter violaceus PCC 7421] gi|35214282|dbj|BAC91650.1| gll3709 [Gloeobacter violaceus PCC 7421]
gll2197 Blast Hits [nr] ref|NP_926659.1| glucosyltransferase [Gloeobacter violaceus PCC 7421] gi|35214286|dbj|BAC91654.1| gll3713 [Gloeobacter violaceus PCC 7421]
gll2319 Blast Hits [nr] ref|ZP_03129536.1| Peptidase S53 propeptide [Chthoniobacter flavus Ellin428] gi|196225016|gb|EDY19525.1| Peptidase S53 propeptide [Chthoniobacter flavus Ellin428]
gll2410 Blast Hits [nr] ref|YP_002481221.1| protein of unknown function DUF820 [Cyanothece sp. PCC 7425] gi|219862521|gb|ACL42860.1| protein of unknown function DUF820 [Cyanothece sp. PCC 7425]
gll2475 Blast Hits [nr] ref|ZP_03131543.1| histidinol-phosphate aminotransferase [Chthoniobacter flavus Ellin428] gi|196223152|gb|EDY17671.1| histidinol-phosphate aminotransferase [Chthoniobacter flavus Ellin428]
gll3259 Blast Hits [nr] ref|NP_927235.1| hypothetical protein glr4289 [Gloeobacter violaceus PCC 7421] gi|35214864|dbj|BAC92230.1| glr4289 [Gloeobacter violaceus PCC 7421]
gll3947 Blast Hits [nr] ref|ZP_01856821.1| hypothetical protein PM8797T_16545 [Planctomyces maris DSM 8797] gi|148842877|gb|EDL57247.1| hypothetical protein PM8797T_16545 [Planctomyces maris DSM 8797]
gll4019 Blast Hits [nr] ref|YP_002378296.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7424] gi|218172695|gb|ACK71428.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7424]
gll4186 Blast Hits [nr] ref|YP_002481236.1| Domain of unknown function DUF1823 [Cyanothece sp. PCC 7425] gi|219862536|gb|ACL42875.1| Domain of unknown function DUF1823 [Cyanothece sp. PCC 7425]
gll4210 Blast Hits [nr] ref|YP_474508.1| ABC transporter, ATP-binding protein [Synechococcus sp. JA-3-3Ab] gi|86554287|gb|ABC99245.1| ABC transporter, ATP-binding protein [Synechococcus sp. JA-3-3Ab]
gll4416 Blast Hits [nr] ref|YP_474428.1| hypothetical protein CYA_0965 [Synechococcus sp. JA-3-3Ab] gi|86554207|gb|ABC99165.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
glr0050 Blast Hits [nr] ref|ZP_01632514.1| hypothetical protein N9414_13085 [Nodularia spumigena CCY9414] gi|119461850|gb|EAW42864.1| hypothetical protein N9414_13085 [Nodularia spumigena CCY9414]
glr0085 Blast Hits [nr] ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017] gi|189042827|sp|B0C1D3.1|RL3_ACAM1 RecName: Full=50S ribosomal protein L3 gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
glr0628 Blast Hits [nr] ref|YP_001865033.1| hypothetical protein Npun_F1382 [Nostoc punctiforme PCC 73102] gi|186464289|gb|ACC80090.1| protein of unknown function UPF0047 [Nostoc punctiforme PCC 73102]
glr1034 Blast Hits [nr] ref|ZP_03133452.1| leucyl/phenylalanyl-tRNA/protein transferase [Chthoniobacter flavus Ellin428] gi|196221303|gb|EDY15855.1| leucyl/phenylalanyl-tRNA/protein transferase [Chthoniobacter flavus Ellin428]
glr2504 Blast Hits [nr] ref|NP_377803.1| cobalt-precorrin-6A synthase [Sulfolobus tokodaii str. 7] gi|48428135|sp|Q96ZL3.1|CBID_SULTO RecName: Full=Putative cobalt-precorrin-6A synthase [deacetylating] gi|15622922|dbj|BAB66912.1| 354aa long hypothetical cbiD protein [Sulfolobus tokodaii str. 7]
glr2715 Blast Hits [nr] ref|YP_002771312.1| septum formation protein Maf [Brevibacillus brevis NBRC 100599] gi|226094366|dbj|BAH42808.1| septum formation protein Maf [Brevibacillus brevis NBRC 100599]
glr2942 Blast Hits [nr] ref|NP_925433.1| single-stranded DNA-binding protein [Gloeobacter violaceus PCC 7421] gi|35213055|dbj|BAC90428.1| single-stranded DNA-binding protein [Gloeobacter violaceus PCC 7421]
glr3058 Blast Hits [nr] ref|YP_002378428.1| alpha/beta hydrolase fold protein [Cyanothece sp. PCC 7424] gi|218172827|gb|ACK71560.1| alpha/beta hydrolase fold protein [Cyanothece sp. PCC 7424]
glr3230 Blast Hits [nr] ref|ZP_03129332.1| glycoside hydrolase family 1 [Chthoniobacter flavus Ellin428] gi|196225400|gb|EDY19908.1| glycoside hydrolase family 1 [Chthoniobacter flavus Ellin428]
glr3536 Blast Hits [nr] ref|YP_001655428.1| hypothetical protein MAE_04140 [Microcystis aeruginosa NIES-843] gi|166085528|dbj|BAG00236.1| hypothetical protein [Microcystis aeruginosa NIES-843]
glr3609 Blast Hits [nr] ref|YP_428438.1| transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Rhodospirillum rubrum ATCC 11170] gi|83577600|gb|ABC24151.1| Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase [Rhodospirillum rubrum ATCC 11170]
glr3827 Blast Hits [nr] ref|YP_322999.1| Iron-containing alcohol dehydrogenase [Anabaena variabilis ATCC 29413] gi|75702428|gb|ABA22104.1| Iron-containing alcohol dehydrogenase [Anabaena variabilis ATCC 29413]
glr4007 Blast Hits [nr] ref|YP_001039190.1| endoribonuclease L-PSP [Clostridium thermocellum ATCC 27405] gi|256003060|ref|ZP_05428052.1| endoribonuclease L-PSP [Clostridium thermocellum DSM 2360] gi|281419270|ref|ZP_06250286.1| endoribonuclease L-PSP [Clostridium thermocellum JW20] gi|125715505|gb|ABN53997.1| endoribonuclease L-PSP [Clostridium thermocellum ATCC 27405] gi|255992751|gb|EEU02841.1| endoribonuclease L-PSP [Clostridium thermocellum DSM 2360] gi|281407136|gb|EFB37398.1| endoribonuclease L-PSP [Clostridium thermocellum JW20]
glr4138 Blast Hits [nr] ref|YP_001868428.1| peptidase M16 domain-containing protein [Nostoc punctiforme PCC 73102] gi|186467684|gb|ACC83485.1| peptidase M16 domain protein [Nostoc punctiforme PCC 73102]
glr4277 Blast Hits [nr] ref|YP_002481240.1| DNA-directed RNA polymerase, gamma subunit [Cyanothece sp. PCC 7425] gi|254765317|sp|B8HTV9.1|RPOC1_CYAP4 RecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; AltName: Full=Transcriptase subunit gamma; AltName: Full=RNA polymerase subunit gamma gi|219862540|gb|ACL42879.1| DNA-directed RNA polymerase, gamma subunit [Cyanothece sp. PCC 7425]
glr4278 Blast Hits [nr] ref|YP_002481239.1| DNA-directed RNA polymerase, beta'' subunit [Cyanothece sp. PCC 7425] gi|219862539|gb|ACL42878.1| DNA-directed RNA polymerase, beta'' subunit [Cyanothece sp. PCC 7425]
gsl0167 Blast Hits [nr] ref|YP_002422215.1| plasmid stabilization system [Methylobacterium chloromethanicum CM4] gi|218523702|gb|ACK84287.1| plasmid stabilization system [Methylobacterium chloromethanicum CM4]
gsl3804 Blast Hits [nr] ref|ZP_01730314.1| hypothetical protein CY0110_04286 [Cyanothece sp. CCY0110] gi|126619582|gb|EAZ90312.1| hypothetical protein CY0110_04286 [Cyanothece sp. CCY0110]
gll3460 Blast Hits [sprot] AAD14_YEAST (sp|P42884) Putative aryl-alcohol dehydrogenase AAD14 OS=Saccharomyces cerevisiae GN=AAD14 PE=1 SV=1
gll4160 Blast Hits [sprot] YCF27_GUITH (sp|O78428) Probable transcriptional regulator ycf27 OS=Guillardia theta GN=ycf27 PE=3 SV=1
gll4162 Blast Hits [sprot] YCF27_GUITH (sp|O78428) Probable transcriptional regulator ycf27 OS=Guillardia theta GN=ycf27 PE=3 SV=1
glr1290 Blast Hits [sprot] UGPC_RALEH (sp|Q0K998) sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ugpC PE=3 SV=1
glr3684 Blast Hits [sprot] CBBYC_RALEH (sp|P40119) Protein cbbY, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3
gll1298 Blast Hits [pln_est] gb|FL714850|FL714850 CCGB2428.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB2428 5', mRNA sequence.
gll1335 Blast Hits [pln_est] dbj|EG631268|EG631268 030611AAYA001428CT (AAYA) Royal Gala 126 DAFB fruit cortex Malus x domestica cDNA clone AAYAA00142, mRNA sequence.
gll1420 Blast Hits [pln_est] gb|BE428643|BE428643 MTD009.C08F990617 ITEC MTD Durum Wheat Root Library Triticum turgidum subsp. durum cDNA clone MTD009.C08, mRNA sequence.
gll1869 Blast Hits [pln_est] gb|GO016619|GO016619 LJGB428TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA sequence.
gll2304 Blast Hits [pln_est] gb|CD825428|CD825428 BN25.060L20F011129 BN25 Brassica napus cDNA clone BN25060L20, mRNA sequence.
gll2505 Blast Hits [pln_est] gb|BE428643|BE428643 MTD009.C08F990617 ITEC MTD Durum Wheat Root Library Triticum turgidum subsp. durum cDNA clone MTD009.C08, mRNA sequence.
gll2684 Blast Hits [pln_est] gb|BE428643|BE428643 MTD009.C08F990617 ITEC MTD Durum Wheat Root Library Triticum turgidum subsp. durum cDNA clone MTD009.C08, mRNA sequence.
gll3997 Blast Hits [pln_est] gb|GR428120|GR428120 Ed09024E05.ab1 Eucheuma denticulatum cDNA library Eucheuma denticulatum cDNA clone Ed09024E05.ab1, mRNA sequence.
gll4004 Blast Hits [pln_est] gb|CD428087|CD428087 ETH1_32_B10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA clone ETH1_32_B10_A002 5', mRNA sequence.
glr0193 Blast Hits [pln_est] dbj|ES334284|ES334284 CTZ54-C12.x1d-t SHGC-CTZ Ostreococcus lucimarinus CCE9901 cDNA 3', mRNA sequence.
glr0869 Blast Hits [pln_est] dbj|DY842849|DY842849 CTOZ9345.b1_B09.ab1 CTO(XYZ) dandelion Taraxacum officinale cDNA clone CTOZ9345, mRNA sequence.
glr1768 Blast Hits [pln_est] dbj|DR014288|DR014288 HEAT1_24_C07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_24_C07_A029 5', mRNA sequence.
glr2217 Blast Hits [pln_est] gb|GE591428|GE591428 CCPW15391.b1_M07.ab1 CCP(UWX) Globe Artichoke Cynara scolymus cDNA clone CCPW15391, mRNA sequence.
glr2343 Blast Hits [pln_est] gb|CU714280|CU714280 CU714280 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA23YL23 5', mRNA sequence.
glr3783 Blast Hits [pln_est] gb|FL428543|FL428543 24473287 CERES-505 Zea mays cDNA clone 1625064 5', mRNA sequence.
gsl3203 Blast Hits [pln_est] gb|GE498428|GE498428 CCFT1206.b1_K13.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFT1206, mRNA sequence.
gll0103 Blast Hits [TAIR_pep] AT5G35810.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G54070.1); Has 446 Blast hits to 440 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:13993428-13994549 REVERSE
gll0192 Blast Hits [TAIR_pep] AT5G50210.1 | Symbols: QS, OLD5, SUFE3 | QS (QUINOLINATE SYNTHASE); 4 iron, 4 sulfur cluster binding / enzyme activator/ protein homodimerization/ quinolinate synthetase A | chr5:20442803-20445706 FORWARD
gll0521 Blast Hits [TAIR_pep] AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr1:19608857-19610428 REVERSE
gll0589 Blast Hits [TAIR_pep] AT2G42810.2 | Symbols: PP5, PP5.2 | PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/ protein binding / protein serine/threonine phosphatase | chr2:17812336-17815896 REVERSE
gll1008 Blast Hits [TAIR_pep] AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | ATM2 (ARABIDOPSIS THALIANA MYOSIN 2); motor | chr5:22039606-22045592 REVERSE
gll1170 Blast Hits [TAIR_pep] AT1G24280.1 | Symbols: G6PD3 | G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3); glucose-6-phosphate dehydrogenase | chr1:8609495-8612383 FORWARD
gll1303 Blast Hits [TAIR_pep] AT1G03400.1 | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:842895-844158 REVERSE
gll1595 Blast Hits [TAIR_pep] AT2G36390.1 | Symbols: SBE2.1, BE3 | SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme | chr2:15264283-15269940 FORWARD
gll1805 Blast Hits [TAIR_pep] AT1G79340.1 | Symbols: AtMC4 | AtMC4 (metacaspase 4); cysteine-type peptidase | chr1:29842849-29844368 FORWARD
gll1847 Blast Hits [TAIR_pep] AT5G39830.1 | Symbols: DEGP8, DEG8 | DEG8; peptidase/ serine-type peptidase | chr5:15942883-15945676 FORWARD
gll1862 Blast Hits [TAIR_pep] AT5G66050.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729); BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G19660.2); Has 338 Blast hits to 338 proteins in 128 species: Archae - 11; Bacteria - 214; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | chr5:26412333-26414428 REVERSE
gll2229 Blast Hits [TAIR_pep] AT4G24280.1 | Symbols: cpHsc70-1 | cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | chr4:12590094-12593437 FORWARD
gll2295 Blast Hits [TAIR_pep] AT1G20020.1 | Symbols: ATLFNR2, FNR2 | FNR2 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2); NADPH dehydrogenase/ oxidoreductase/ poly(U) binding | chr1:6942851-6944868 FORWARD
gll2418 Blast Hits [TAIR_pep] AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | RGD3 (ROOT GROWTH DEFECTIVE 3); ATP binding / DNA binding / binding / helicase/ nucleic acid binding | chr3:20092361-20103807 FORWARD
gll2839 Blast Hits [TAIR_pep] AT5G42870.1 | Symbols: | lipin family protein | chr5:17185719-17189681 REVERSE
gll3250 Blast Hits [TAIR_pep] AT5G43880.1 | Symbols: | unknown protein | chr5:17639975-17642848 REVERSE
gll3636 Blast Hits [TAIR_pep] AT5G60370.1 | Symbols: | unknown protein | chr5:24282858-24284760 FORWARD
gll4298 Blast Hits [TAIR_pep] AT5G24280.1 | Symbols: | EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: DMS3 (DEFECTIVE IN MERISTEM SILENCING 3) (TAIR:AT3G49250.1); Has 61 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:8251378-8261428 REVERSE
gll4299 Blast Hits [TAIR_pep] AT5G36250.1 | Symbols: | protein phosphatase 2C, putative / PP2C, putative | chr5:14282590-14284376 FORWARD
glr0073 Blast Hits [TAIR_pep] AT1G76050.2 | Symbols: | pseudouridine synthase family protein | chr1:28540858-28542826 FORWARD
glr0215 Blast Hits [TAIR_pep] AT1G76850.1 | Symbols: SEC5A | SEC5A (EXOCYST COMPLEX COMPONENT SEC5) | chr1:28848013-28854282 FORWARD
glr0273 Blast Hits [TAIR_pep] AT3G04280.3 | Symbols: ARR22 | ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator | chr3:1130138-1130689 REVERSE
glr0288 Blast Hits [TAIR_pep] AT3G63190.1 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSE
glr0386 Blast Hits [TAIR_pep] AT3G01380.1 | Symbols: | catalytic/ transferase | chr3:144288-149828 REVERSE
glr0898 Blast Hits [TAIR_pep] AT1G65260.1 | Symbols: PTAC4 | PTAC4 (PLASTID TRANSCRIPTIONALLY ACTIVE4) | chr1:24236329-24240428 FORWARD
glr1011 Blast Hits [TAIR_pep] AT3G23510.1 | Symbols: | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative | chr3:8428071-8433159 FORWARD
glr1306 Blast Hits [TAIR_pep] AT2G36390.1 | Symbols: SBE2.1, BE3 | SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme | chr2:15264283-15269940 FORWARD
glr1387 Blast Hits [TAIR_pep] AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2761195-2764281 REVERSE
glr1479 Blast Hits [TAIR_pep] AT2G21050.1 | Symbols: | amino acid permease, putative | chr2:9034289-9036439 FORWARD
glr1745 Blast Hits [TAIR_pep] AT3G42850.1 | Symbols: | galactokinase, putative | chr3:14940114-14945291 REVERSE
glr1926 Blast Hits [TAIR_pep] AT4G34120.1 | Symbols: LEJ1, CDCP1 | LEJ1 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1) | chr4:16341194-16342893 FORWARD
glr2237 Blast Hits [TAIR_pep] AT5G19150.2 | Symbols: | carbohydrate kinase family | chr5:6426280-6428402 REVERSE
glr2266 Blast Hits [TAIR_pep] AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | RGD3 (ROOT GROWTH DEFECTIVE 3); ATP binding / DNA binding / binding / helicase/ nucleic acid binding | chr3:20092361-20103807 FORWARD
glr2402 Blast Hits [TAIR_pep] AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2761195-2764281 REVERSE
glr2925 Blast Hits [TAIR_pep] AT5G04280.1 | Symbols: | glycine-rich RNA-binding protein | chr5:1192461-1195413 FORWARD
glr3167 Blast Hits [TAIR_pep] AT2G42810.2 | Symbols: PP5, PP5.2 | PP5.2 (PROTEIN PHOSPHATASE 5.2); phosphoprotein phosphatase/ protein binding / protein serine/threonine phosphatase | chr2:17812336-17815896 REVERSE
glr3220 Blast Hits [TAIR_pep] AT1G76850.1 | Symbols: SEC5A | SEC5A (EXOCYST COMPLEX COMPONENT SEC5) | chr1:28848013-28854282 FORWARD
glr3299 Blast Hits [TAIR_pep] AT4G34350.1 | Symbols: CLB6, ISPH, HDR | HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | chr4:16428681-16431038 REVERSE
glr4100 Blast Hits [TAIR_pep] AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:2761195-2764281 REVERSE
glr4334 Blast Hits [TAIR_pep] AT5G04890.1 | Symbols: RTM2 | RTM2 (RESTRICTED TEV MOVEMENT 2) | chr5:1427217-1428390 FORWARD
gsl0249 Blast Hits [TAIR_pep] AT3G21295.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51745.1); Has 428 Blast hits to 314 proteins in 77 species: Archae - 0; Bacteria - 111; Metazoa - 87; Fungi - 55; Plants - 63; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). | chr3:7489635-7492296 FORWARD
gsl3372 Blast Hits [TAIR_pep] AT3G04870.2 | Symbols: ZDS, PDE181 | ZDS (ZETA-CAROTENE DESATURASE); carotene 7,8-desaturase | chr3:1342842-1346189 FORWARD
gsl3994 Blast Hits [TAIR_pep] AT4G34280.1 | Symbols: | transducin family protein / WD-40 repeat family protein | chr4:16407084-16410644 FORWARD
gsr0113 Blast Hits [TAIR_pep] AT5G13350.1 | Symbols: | auxin-responsive GH3 family protein | chr5:4279884-4282287 FORWARD
gsr0904 Blast Hits [TAIR_pep] ATCG00820.1 | Symbols: RPS19 | Encodes a 6.8-kDa protein of the small ribosomal subunit. | chrC:84005-84283 REVERSE
gsr3224 Blast Hits [TAIR_pep] AT5G03415.1 | Symbols: DPB, ATDPB | DPB; protein binding / protein heterodimerization | chr5:842842-845200 FORWARD

Word clouds

API

? | +/- | Top
Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (165)
2.806168671

MicrobeBase