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Full-text search result: 77 genes by "sper" TXT SET

Gloeobacter violaceus PCC 7421 (77 genes ) TXT SET

gll0528	InterPro	IPR005097 Saccharopine dehydrogenase / Homospermidine synthase; HMMPfam:PF03435 Saccharop_dh
glr1359	Gene product	probable periplasmic spermidine/putrescine-binding protein
	InterPro	IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein; FPrintScan:PR00909 SPERMDNBNDNG
	Blast Hits	[nr] ref\|YP_074297.1\| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Symbiobacterium thermophilum IAM 14863] gi\|51855295\|dbj\|BAD39453.1\| spermidine/putrescine ABC transporter spermidine/putrescine-binding protein [Symbiobacterium thermophilum IAM 14863]
	Blast Hits	[pln_est] emb\|AW036096\|AW036096 EST278182 tomato seed, TAMU Solanum lycopersicum cDNA clone cLEE3I22 similar to spermidine/putrescine binding protein, putative, mRNA sequence.
	Blast Hits	[sprot] POTD2_HAEIN (sp\|P44731) Spermidine/putrescine-binding periplasmic protein 2 OS=Haemophilus influenzae GN=potD-A PE=3 SV=2
glr1721	InterPro	IPR005097 Saccharopine dehydrogenase / Homospermidine synthase; HMMPfam:PF03435 Saccharop_dh
glr2391	InterPro	IPR005097 Saccharopine dehydrogenase / Homospermidine synthase; HMMPfam:PF03435 Saccharop_dh
gll4070	GO term	Biological Process: spermidine biosynthetic process (GO:0008295)
gll0117	Blast Hits	[nr] ref\|ZP_06308567.1\| Peptidase S51, dipeptidase E [Cylindrospermopsis raciborskii CS-505] gi\|281194425\|gb\|EFA69380.1\| Peptidase S51, dipeptidase E [Cylindrospermopsis raciborskii CS-505]
gll0266	Blast Hits	[nr] ref\|XP_001390479.1\| hypothetical protein An03g06010 [Aspergillus niger] gi\|134058166\|emb\|CAK38360.1\| unnamed protein product [Aspergillus niger]
gll0974	Blast Hits	[nr] ref\|XP_752195.1\| longevity-assurance protein (LAC1) [Aspergillus fumigatus Af293] gi\|66849829\|gb\|EAL90157.1\| longevity-assurance protein (LAC1), putative [Aspergillus fumigatus Af293] gi\|159124892\|gb\|EDP50009.1\| longevity-assurance protein (LAC1), putative [Aspergillus fumigatus A1163]
gll1078	Blast Hits	[nr] ref\|XP_001209420.1\| chitin synthase A [Aspergillus terreus NIH2624] gi\|114187867\|gb\|EAU29567.1\| chitin synthase A [Aspergillus terreus NIH2624]
gll1217	Blast Hits	[nr] ref\|ZP_06306666.1\| Alpha/beta hydrolase fold protein [Cylindrospermopsis raciborskii CS-505] gi\|281196546\|gb\|EFA71455.1\| Alpha/beta hydrolase fold protein [Cylindrospermopsis raciborskii CS-505]
gll1403	Blast Hits	[nr] ref\|YP_001680844.1\| spermidine/putrescine abc transporter, permease protein [Heliobacterium modesticaldum Ice1] gi\|167593085\|gb\|ABZ84833.1\| spermidine/putrescine abc transporter, permease protein [Heliobacterium modesticaldum Ice1]
gll1403	Blast Hits	[sprot] POTB_SHIFL (sp\|P0AFK5) Spermidine/putrescine transport system permease protein potB OS=Shigella flexneri GN=potB PE=3 SV=1
gll1404	Blast Hits	[nr] ref\|ZP_01618737.1\| Spermidine/putrescine ABC transporter ATP-binding subunit [Lyngbya sp. PCC 8106] gi\|119458090\|gb\|EAW39212.1\| Spermidine/putrescine ABC transporter ATP-binding subunit [Lyngbya sp. PCC 8106]
gll1404	Blast Hits	[sprot] POTA_ANAVT (sp\|Q3MAR5) Spermidine/putrescine import ATP-binding protein PotA OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=potA PE=3 SV=1
gll1769	Blast Hits	[nr] ref\|ZP_06307697.1\| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent [Cylindrospermopsis raciborskii CS-505] gi\|281195349\|gb\|EFA70283.1\| Carbamoyl-phosphate synthase, large subunit, glutamine-dependent [Cylindrospermopsis raciborskii CS-505]
gll1985	Blast Hits	[nr] ref\|ZP_06307774.1\| Phosphoenolpyruvate synthase [Cylindrospermopsis raciborskii CS-505] gi\|281195294\|gb\|EFA70229.1\| Phosphoenolpyruvate synthase [Cylindrospermopsis raciborskii CS-505]
gll2035	Blast Hits	[nr] ref\|ZP_06307256.1\| protein of unknown function DUF156 [Cylindrospermopsis raciborskii CS-505] gi\|281195854\|gb\|EFA70780.1\| protein of unknown function DUF156 [Cylindrospermopsis raciborskii CS-505]
gll2083	Blast Hits	[nr] ref\|ZP_06307490.1\| NAD(P)H dehydrogenase, subunit NdhF3 [Cylindrospermopsis raciborskii CS-505] gi\|281195405\|gb\|EFA70338.1\| NAD(P)H dehydrogenase, subunit NdhF3 [Cylindrospermopsis raciborskii CS-505]
gll2205	Blast Hits	[nr] ref\|ZP_06308139.1\| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Cylindrospermopsis raciborskii CS-505] gi\|281194932\|gb\|EFA69873.1\| dTDP-4-dehydrorhamnose 3,5-epimerase related protein [Cylindrospermopsis raciborskii CS-505]
gll2208	Blast Hits	[nr] ref\|ZP_06308145.1\| Nucleotidyl transferase [Cylindrospermopsis raciborskii CS-505] gi\|281194938\|gb\|EFA69879.1\| Nucleotidyl transferase [Cylindrospermopsis raciborskii CS-505]
gll2292	Blast Hits	[nr] ref\|ZP_06309847.1\| HEPN domain protein [Cylindrospermopsis raciborskii CS-505] gi\|281193213\|gb\|EFA68208.1\| HEPN domain protein [Cylindrospermopsis raciborskii CS-505]
gll2293	Blast Hits	[nr] ref\|ZP_06309848.1\| Nucleotidyltransferase family protein [Cylindrospermopsis raciborskii CS-505] gi\|281193214\|gb\|EFA68209.1\| Nucleotidyltransferase family protein [Cylindrospermopsis raciborskii CS-505]
gll2639	Blast Hits	[nr] ref\|ZP_06307563.1\| Signal recognition particle protein [Cylindrospermopsis raciborskii CS-505] gi\|281195478\|gb\|EFA70411.1\| Signal recognition particle protein [Cylindrospermopsis raciborskii CS-505]
gll2832	Blast Hits	[nr] ref\|ZP_06309130.1\| Beta-ketoacyl synthase [Cylindrospermopsis raciborskii CS-505] gi\|281193901\|gb\|EFA68869.1\| Beta-ketoacyl synthase [Cylindrospermopsis raciborskii CS-505]
gll3102	Blast Hits	[nr] ref\|ZP_06307691.1\| Peptidase S41A [Cylindrospermopsis raciborskii CS-505] gi\|281195343\|gb\|EFA70277.1\| Peptidase S41A [Cylindrospermopsis raciborskii CS-505]
gll3335	Blast Hits	[nr] ref\|ZP_06307681.1\| ABC-2 [Cylindrospermopsis raciborskii CS-505] gi\|281195596\|gb\|EFA70529.1\| ABC-2 [Cylindrospermopsis raciborskii CS-505]
gll3542	Blast Hits	[nr] ref\|ZP_06308705.1\| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii CS-505] gi\|281194348\|gb\|EFA69304.1\| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii CS-505]
gll3551	Blast Hits	[nr] ref\|ZP_06307541.1\| 3-isopropylmalate dehydrogenase [Cylindrospermopsis raciborskii CS-505] gi\|281195456\|gb\|EFA70389.1\| 3-isopropylmalate dehydrogenase [Cylindrospermopsis raciborskii CS-505]
gll4187	Blast Hits	[nr] ref\|XP_751003.1\| protein kinase (VPS15) [Aspergillus fumigatus Af293] gi\|21627821\|emb\|CAD37153.1\| possible kinase with calcium binding domain [Aspergillus fumigatus] gi\|66848636\|gb\|EAL88965.1\| protein kinase (VPS15), putative [Aspergillus fumigatus Af293] gi\|159124573\|gb\|EDP49691.1\| protein kinase (VPS15), putative [Aspergillus fumigatus A1163]
glr0134	Blast Hits	[nr] ref\|ZP_06308758.1\| hypothetical protein CRC_02235 [Cylindrospermopsis raciborskii CS-505] gi\|281194274\|gb\|EFA69232.1\| hypothetical protein CRC_02235 [Cylindrospermopsis raciborskii CS-505]
glr0369	Blast Hits	[nr] ref\|ZP_06309057.1\| Zinc-containing alcohol dehydrogenase superfamily [Cylindrospermopsis raciborskii CS-505] gi\|281193958\|gb\|EFA68924.1\| Zinc-containing alcohol dehydrogenase superfamily [Cylindrospermopsis raciborskii CS-505]
glr0448	Blast Hits	[nr] ref\|ZP_06308313.1\| Phosphate transport system permease protein 1 [Cylindrospermopsis raciborskii CS-505] gi\|281194676\|gb\|EFA69623.1\| Phosphate transport system permease protein 1 [Cylindrospermopsis raciborskii CS-505]
glr0530	Blast Hits	[nr] ref\|ZP_06309941.1\| Glyceraldehyde-3-phosphate dehydrogenase, type I [Cylindrospermopsis raciborskii CS-505] gi\|281193130\|gb\|EFA68129.1\| Glyceraldehyde-3-phosphate dehydrogenase, type I [Cylindrospermopsis raciborskii CS-505]
glr0796	Blast Hits	[nr] ref\|ZP_06308483.1\| Alpha/beta hydrolase fold protein [Cylindrospermopsis raciborskii CS-505] gi\|281194592\|gb\|EFA69545.1\| Alpha/beta hydrolase fold protein [Cylindrospermopsis raciborskii CS-505]
glr0847	Blast Hits	[nr] ref\|ZP_06306898.1\| Coenzyme A biosynthesis protein [Cylindrospermopsis raciborskii CS-505] gi\|281196225\|gb\|EFA71138.1\| Coenzyme A biosynthesis protein [Cylindrospermopsis raciborskii CS-505]
glr0903	Blast Hits	[nr] ref\|ZP_06307916.1\| Ribosomal protein L2 [Cylindrospermopsis raciborskii CS-505] gi\|281195225\|gb\|EFA70161.1\| Ribosomal protein L2 [Cylindrospermopsis raciborskii CS-505]
glr1045	Blast Hits	[nr] ref\|ZP_06308817.1\| Deoxyhypusine synthase [Cylindrospermopsis raciborskii CS-505] gi\|281194219\|gb\|EFA69180.1\| Deoxyhypusine synthase [Cylindrospermopsis raciborskii CS-505]
glr1624	Blast Hits	[nr] ref\|ZP_06308159.1\| hypothetical protein CRC_01596 [Cylindrospermopsis raciborskii CS-505] gi\|281194952\|gb\|EFA69893.1\| hypothetical protein CRC_01596 [Cylindrospermopsis raciborskii CS-505]
glr1740	Blast Hits	[nr] ref\|ZP_06308634.1\| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505] gi\|281194492\|gb\|EFA69447.1\| conserved hypothetical protein [Cylindrospermopsis raciborskii CS-505]
glr2377	Blast Hits	[nr] ref\|ZP_06307152.1\| Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins [Cylindrospermopsis raciborskii CS-505] gi\|281195930\|gb\|EFA70850.1\| Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins [Cylindrospermopsis raciborskii CS-505]
glr2966	Blast Hits	[nr] ref\|ZP_06306923.1\| hypothetical protein CRC_00219 [Cylindrospermopsis raciborskii CS-505] gi\|281196081\|gb\|EFA70996.1\| hypothetical protein CRC_00219 [Cylindrospermopsis raciborskii CS-505]
glr3159	Blast Hits	[nr] ref\|ZP_06308052.1\| Peptide chain release factor 3 [Cylindrospermopsis raciborskii CS-505] gi\|281194977\|gb\|EFA69917.1\| Peptide chain release factor 3 [Cylindrospermopsis raciborskii CS-505]
gsl0711	Blast Hits	[nr] ref\|ZP_06306175.1\| Twin-arginine translocation protein TatA/E [Raphidiopsis brookii D9] gi\|282898619\|ref\|ZP_06306607.1\| Twin-arginine translocation protein TatA/E [Cylindrospermopsis raciborskii CS-505] gi\|281196487\|gb\|EFA71396.1\| Twin-arginine translocation protein TatA/E [Cylindrospermopsis raciborskii CS-505] gi\|281196715\|gb\|EFA71620.1\| Twin-arginine translocation protein TatA/E [Raphidiopsis brookii D9]
gsl0768	Blast Hits	[nr] ref\|ZP_06308807.1\| hypothetical protein CRC_02284 [Cylindrospermopsis raciborskii CS-505] gi\|281194268\|gb\|EFA69227.1\| hypothetical protein CRC_02284 [Cylindrospermopsis raciborskii CS-505]
gsl0832	Blast Hits	[nr] ref\|ZP_06307675.1\| Histone-like protein DNA-binding protein [Cylindrospermopsis raciborskii CS-505] gi\|281195590\|gb\|EFA70523.1\| Histone-like protein DNA-binding protein [Cylindrospermopsis raciborskii CS-505]
gll0169	Blast Hits	[sprot] YSH1_ASPFU (sp\|Q4WRC2) Endoribonuclease ysh1 OS=Aspergillus fumigatus GN=ysh1 PE=3 SV=1
gll0587	Blast Hits	[sprot] MAK5_ASPFU (sp\|Q4WMS3) ATP-dependent RNA helicase mak5 OS=Aspergillus fumigatus GN=mak5 PE=3 SV=2
gll1402	Blast Hits	[sprot] POTC_HAEIN (sp\|P45169) Spermidine/putrescine transport system permease protein potC OS=Haemophilus influenzae GN=potC PE=3 SV=1
gll1575	Blast Hits	[sprot] DOHH_ASPCL (sp\|A1CED0) Deoxyhypusine hydroxylase OS=Aspergillus clavatus GN=lia1 PE=3 SV=1
gll1784	Blast Hits	[sprot] ABFC_ASPFU (sp\|Q4WTB3) Probable alpha-N-arabinofuranosidase C OS=Aspergillus fumigatus GN=abfC PE=3 SV=2
gll1813	Blast Hits	[sprot] ASPX_VULVU (sp\|P53353) Sperm acrosomal protein FSA-ACR.1 (Fragment) OS=Vulpes vulpes PE=2 SV=1
gll1963	Blast Hits	[sprot] PPA_ASPFI (sp\|Q12546) Acid phosphatase OS=Aspergillus ficuum GN=aphA PE=1 SV=1
gll2420	Blast Hits	[sprot] ATG26_ASPCL (sp\|A1CFB3) Sterol 3-beta-glucosyltransferase OS=Aspergillus clavatus GN=atg26 PE=3 SV=1
glr0154	Blast Hits	[sprot] TPC1_ASPTN (sp\|Q0CEN9) Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tpc1 PE=3 SV=1
glr0201	Blast Hits	[sprot] DRS1_ASPOR (sp\|Q2UQI6) ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae GN=drs1 PE=3 SV=2
glr1293	Blast Hits	[sprot] LCMT2_ASPOR (sp\|Q2U6D4) Leucine carboxyl methyltransferase 2 OS=Aspergillus oryzae GN=ppm2 PE=3 SV=2
glr1382	Blast Hits	[sprot] ATG11_ASPFU (sp\|Q4WY31) Autophagy-related protein 11 OS=Aspergillus fumigatus GN=atg11 PE=3 SV=1
glr2385	Blast Hits	[sprot] ATDA_ECOLI (sp\|P0A951) Spermidine N(1)-acetyltransferase OS=Escherichia coli (strain K12) GN=speG PE=1 SV=2
gsr0107	Blast Hits	[sprot] DCL2_ASPCL (sp\|A1C9M6) Dicer-like protein 2 OS=Aspergillus clavatus GN=dcl2 PE=3 SV=1
gll0948	Blast Hits	[pln_est] gb\|CD433706\|CD433706 EL01N0314C05.b Endosperm_3 Zea mays cDNA, mRNA sequence.
gll1130	Blast Hits	[pln_est] gb\|CA401462\|CA401462 EL01N0421C01.g Endosperm_4 Zea mays cDNA, mRNA sequence.
gll1167	Blast Hits	[pln_est] gb\|CO448438\|CO448438 MZCCL10126F10.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence.
gll1528	Blast Hits	[pln_est] dbj\|EV523733\|EV523733 JB2_64_H07 Castor seed endosperm Ricinus communis cDNA 5', mRNA sequence.
gll2242	Blast Hits	[pln_est] gb\|BI803985\|BI803985 H123H10 Endosperm library from Oryza sativa (10 days after anthesis) Oryza sativa cDNA clone H123H10, mRNA sequence.
gll2990	Blast Hits	[pln_est] gb\|CO459142\|CO459142 MZCCS15018B01.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence.
gll3315	Blast Hits	[pln_est] gb\|CO439312\|CO439312 MZCCL10005B08.g Maize Endosperm cDNA Library Zea mays cDNA, mRNA sequence.
gll3802	Blast Hits	[pln_est] gb\|CD438691\|CD438691 EL01N0516C06.b Endosperm_5 Zea mays cDNA, mRNA sequence.
gll4123	Blast Hits	[pln_est] gb\|CD433471\|CD433471 EL01N0308H04.b Endosperm_3 Zea mays cDNA, mRNA sequence.
gll4126	Blast Hits	[pln_est] gb\|CD433706\|CD433706 EL01N0314C05.b Endosperm_3 Zea mays cDNA, mRNA sequence.
glr0497	Blast Hits	[pln_est] dbj\|EV521254\|EV521254 JB2_13_D10 Castor seed endosperm Ricinus communis cDNA 5', mRNA sequence.
glr0940	Blast Hits	[pln_est] gb\|CD439459\|CD439459 EL01N0525B03.b Endosperm_5 Zea mays cDNA, mRNA sequence.
glr1098	Blast Hits	[pln_est] dbj\|EE297577\|EE297577 E3D01PZ.SEQ Subtracted cDNA library of Plumbago zeylanica Svn sperm cell Plumbago zeylanica cDNA, mRNA sequence.
glr2014	Blast Hits	[pln_est] gb\|CD438615\|CD438615 EL01N0515D03.b Endosperm_5 Zea mays cDNA, mRNA sequence.
glr2141	Blast Hits	[pln_est] gb\|CD433706\|CD433706 EL01N0314C05.b Endosperm_3 Zea mays cDNA, mRNA sequence.
glr3691	Blast Hits	[pln_est] gb\|GT185110\|GT185110 2-12-E4-M13F Chlorenchyma cells of Bienertia sinuspersici Bienertia sinuspersici cDNA 5', mRNA sequence.
glr3870	Blast Hits	[pln_est] gb\|CA399118\|CA399118 EL01N0314C05.g Endosperm_3 Zea mays cDNA, mRNA sequence.
glr4114	Blast Hits	[pln_est] gb\|CD440403\|CD440403 EL01N0554D01.b Endosperm_5 Zea mays cDNA, mRNA sequence.
gsr2619	Blast Hits	[pln_est] gb\|BI801183\|BI801183 H041C07 Endosperm library from Oryza sativa (10 days after anthesis) Oryza sativa cDNA clone H041C07, mRNA sequence.
glr3780	Blast Hits	[TAIR_pep] AT1G67990.1 \| Symbols: ATTSM1, TSM1 \| TSM1; N1,N5,N10-tris-(5-hydroxyferuloyl)spermidine O-methyltransferase/ caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase/ caffeoyl-CoA O-methyltransferase/ tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase/ trihydroxyferuloyl sper \| chr1:25489494-25490749 FORWARD

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	Column	Description and example
1	Data Source Name	c.f. Synechocystis
2	Gene ID	c.f. slr1311
3	Category name	one of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4	Description	Free text

SET

	Column	Description and example
1	Gene ID	c.f. slr1311

Table of contents (77)

3.00091859

Full-text search result: 77 genes by "sper" TXT SET

Gloeobacter violaceus PCC 7421 (77 genes ) TXT SET

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Full-text search result: 77 genes by "sper" TXT SET

Gloeobacter violaceus PCC 7421 (77 genes ) TXT SET

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