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Full-text search result: 85 genes by "Polysaccharide" TXT SET

Gloeobacter violaceus PCC 7421 (85 genes ) TXT SET

gll1781 Gene product probable polysaccharide transport protein
Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
gll1793 Gene product probable polysaccharide transport protein
Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
Blast Hits [sprot] WZXC_ECOLI (sp|P77377) Lipopolysaccharide biosynthesis protein wzxC OS=Escherichia coli (strain K12) GN=wzxC PE=1 SV=1
gll1796 GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
gll1797 Gene product similar to polysaccharide export outer membrane protein
GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [sprot] YC04_KLEPN (sp|Q48450) Putative capsule polysaccharide export protein OS=Klebsiella pneumoniae PE=3 SV=1
gll2123 InterPro IPR002509 Polysaccharide deacetylase; Gene3D:G3DSA:3.20.20.370 Polysac_deacetylase
InterPro IPR002509 Polysaccharide deacetylase; HMMPfam:PF01522 Polysacc_deac_1
Blast Hits [nr] ref|YP_476433.1| polysaccharide deacetylase family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556213|gb|ABD01170.1| polysaccharide deacetylase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [sprot] YXKH_BACSU (sp|P94361) Putative polysaccharide deacetylase yxkH OS=Bacillus subtilis GN=yxkH PE=3 SV=1
gll2201 GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [nr] ref|ZP_05036302.1| Polysaccharide biosynthesis/export protein [Synechococcus sp. PCC 7335] gi|196190073|gb|EDX85037.1| Polysaccharide biosynthesis/export protein [Synechococcus sp. PCC 7335]
Blast Hits [sprot] GFCE_SHIFL (sp|P0A934) Putative polysaccharide export protein gfcE OS=Shigella flexneri GN=gfcE PE=3 SV=1
gll2202 GO term Biological Process: capsule polysaccharide biosynthetic process (GO:0045227)
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
InterPro IPR005702 Exopolysaccharide synthesis protein; HMMTigr:TIGR01007 eps_fam
glr0453 GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [nr] ref|NP_924743.1| polysaccharide export outer membrane protein [Gloeobacter violaceus PCC 7421] gi|35212363|dbj|BAC89738.1| gll1797 [Gloeobacter violaceus PCC 7421]
Blast Hits [sprot] YC04_KLEPN (sp|Q48450) Putative capsule polysaccharide export protein OS=Klebsiella pneumoniae PE=3 SV=1
glr0454 GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
glr0457 GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
Blast Hits [nr] ref|NP_924739.1| polysaccharide transporter [Gloeobacter violaceus PCC 7421] gi|35212359|dbj|BAC89734.1| gll1793 [Gloeobacter violaceus PCC 7421]
Blast Hits [sprot] WZXC_ECOLI (sp|P77377) Lipopolysaccharide biosynthesis protein wzxC OS=Escherichia coli (strain K12) GN=wzxC PE=1 SV=1
gll3709 GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
Blast Hits [nr] ref|NP_924727.1| polysaccharide transporter [Gloeobacter violaceus PCC 7421] gi|35212347|dbj|BAC89722.1| gll1781 [Gloeobacter violaceus PCC 7421]
gll3716 GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
gll3717 GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [nr] ref|NP_924743.1| polysaccharide export outer membrane protein [Gloeobacter violaceus PCC 7421] gi|35212363|dbj|BAC89738.1| gll1797 [Gloeobacter violaceus PCC 7421]
Blast Hits [sprot] YC04_KLEPN (sp|Q48450) Putative capsule polysaccharide export protein OS=Klebsiella pneumoniae PE=3 SV=1
gll3791 InterPro IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; HMMTigr:TIGR03025 EPS_sugtrans
gll3854 GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
Blast Hits [nr] ref|YP_002756375.1| putative polysaccharide biosynthesis protein [Acidobacterium capsulatum ATCC 51196] gi|225794010|gb|ACO34100.1| putative polysaccharide biosynthesis protein [Acidobacterium capsulatum ATCC 51196]
glr0745 InterPro IPR019896 Polysaccharide pyruvyl transferase, CsaB; HMMTigr:TIGR03609 S_layer_CsaB
Blast Hits [nr] ref|YP_002371910.1| polysaccharide pyruvyl transferase [Cyanothece sp. PCC 8801] gi|257059579|ref|YP_003137467.1| polysaccharide pyruvyl transferase [Cyanothece sp. PCC 8802] gi|218167017|gb|ACK65754.1| polysaccharide pyruvyl transferase [Cyanothece sp. PCC 8801] gi|256589745|gb|ACV00632.1| polysaccharide pyruvyl transferase [Cyanothece sp. PCC 8802]
glr3239 GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [sprot] WZA_ECOLI (sp|P0A930) Putative polysaccharide export protein wza OS=Escherichia coli (strain K12) GN=wza PE=3 SV=1
glr3241 Gene product capsular polysaccharide biosynthesis protein, CapC homolog
Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
InterPro IPR016667 Capsular polysaccharide synthesis, CpsB/CapC; HMMPIR:PIRSF016557 Caps_synth_CpsB
glr3784 GO term Biological Process: polysaccharide transport (GO:0015774)
GO term Molecular Function: polysaccharide transmembrane transporter activity (GO:0015159)
InterPro IPR003715 Polysaccharide export protein; HMMPfam:PF02563 Poly_export
Blast Hits [nr] ref|ZP_01083902.1| putative polysaccharide export protein [Synechococcus sp. WH 5701] gi|87284029|gb|EAQ75982.1| putative polysaccharide export protein [Synechococcus sp. WH 5701]
Blast Hits [sprot] WZA_SALTY (sp|Q8ZNQ9) Putative polysaccharide export protein wza OS=Salmonella typhimurium GN=wza PE=3 SV=1
glr3785 GO term Biological Process: capsule polysaccharide biosynthetic process (GO:0045227)
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
InterPro IPR005702 Exopolysaccharide synthesis protein; HMMTigr:TIGR01007 eps_fam
Blast Hits [nr] ref|ZP_05026004.1| capsular exopolysaccharide family protein [Microcoleus chthonoplastes PCC 7420] gi|196181195|gb|EDX76184.1| capsular exopolysaccharide family protein [Microcoleus chthonoplastes PCC 7420]
glr3855 GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
InterPro IPR002797 Polysaccharide biosynthesis protein; HMMPfam:PF01943 Polysacc_synt
Blast Hits [nr] ref|YP_385831.1| polysaccharide biosynthesis protein [Geobacter metallireducens GS-15] gi|78195339|gb|ABB33106.1| Polysaccharide biosynthesis protein [Geobacter metallireducens GS-15]
glr4253 Function Central intermediary metabolism: Polysaccharides and glycoproteins
InterPro IPR002509 Polysaccharide deacetylase; Gene3D:G3DSA:3.20.20.370 Polysac_deacetylase
InterPro IPR002509 Polysaccharide deacetylase; HMMPfam:PF01522 Polysacc_deac_1
Blast Hits [nr] ref|YP_723435.1| polysaccharide deacetylase [Trichodesmium erythraeum IMS101] gi|110168422|gb|ABG52962.1| polysaccharide deacetylase [Trichodesmium erythraeum IMS101]
glr4310 GO term Biological Process: capsule polysaccharide biosynthetic process (GO:0045227)
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
InterPro IPR003856 Lipopolysaccharide biosynthesis; HMMPfam:PF02706 Wzz
InterPro IPR005702 Exopolysaccharide synthesis protein; HMMTigr:TIGR01007 eps_fam
Blast Hits [nr] ref|YP_001865134.1| lipopolysaccharide biosynthesis protein [Nostoc punctiforme PCC 73102] gi|186464390|gb|ACC80191.1| lipopolysaccharide biosynthesis protein [Nostoc punctiforme PCC 73102]
glr0080 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr0388 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr0468 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr0469 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
glr0470 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
gll0650 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr0687 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll0694 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr0701 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
gll0763 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
gll0764 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr0932 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll0947 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr0998 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr1179 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr1306 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll2179 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
gll2185 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
gll2205 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
gll2208 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr2845 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3112 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr3234 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
Blast Hits [sprot] SPSK_BACSU (sp|P39631) Spore coat polysaccharide biosynthesis protein spsK OS=Bacillus subtilis GN=spsK PE=3 SV=3
glr3235 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr3237 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
gll3331 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3548 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr3646 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3702 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
gll3713 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3718 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3721 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr3757 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3773 Function Cell envelope: Surface polysaccharides, lipopolysaccharides and antigens
glr3790 Function Central intermediary metabolism: Polysaccharides and glycoproteins
Blast Hits [sprot] WBBL_ECOLI (sp|P36667) Putative lipopolysaccharide biosynthesis glycosyltransferase wbbL OS=Escherichia coli (strain K12) GN=wbbL PE=3 SV=1
gll3878 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll3983 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr4229 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll4260 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll4300 Function Central intermediary metabolism: Polysaccharides and glycoproteins
glr4311 Function Central intermediary metabolism: Polysaccharides and glycoproteins
gll0037 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
gll1783 GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
gll2606 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
glr0058 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
glr0059 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
glr0060 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
glr0443 GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
glr2138 GO term Biological Process: polysaccharide metabolic process (GO:0005976)
glr2935 GO term Biological Process: polysaccharide catabolic process (GO:0000272)
glr3121 GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
glr3775 GO term Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)
glr4245 GO term Biological Process: polysaccharide biosynthetic process (GO:0000271)
gll1791 Blast Hits [sprot] LPSE_RHIME (sp|Q9R9N1) Lipopolysaccharide core biosynthesis glycosyltransferase lpsE OS=Rhizobium meliloti GN=lpsE PE=3 SV=1
gll2186 Blast Hits [sprot] EXOZ_RHIME (sp|P26502) Exopolysaccharide production protein exoZ OS=Rhizobium meliloti GN=exoZ PE=3 SV=2
gll2198 Blast Hits [sprot] WAAE_KLEPN (sp|Q9XC90) Lipopolysaccharide core biosynthesis glycosyltransferase waaE OS=Klebsiella pneumoniae GN=waaE PE=3 SV=1
gll3333 Blast Hits [sprot] LPTG_HAEIN (sp|P45332) Lipopolysaccharide export system permease protein lptG OS=Haemophilus influenzae GN=lptG PE=3 SV=1
glr0459 Blast Hits [sprot] LPSE_RHIME (sp|Q9R9N1) Lipopolysaccharide core biosynthesis glycosyltransferase lpsE OS=Rhizobium meliloti GN=lpsE PE=3 SV=1
glr0475 Blast Hits [sprot] LPSE_RHIME (sp|Q9R9N1) Lipopolysaccharide core biosynthesis glycosyltransferase lpsE OS=Rhizobium meliloti GN=lpsE PE=3 SV=1
glr0931 Blast Hits [sprot] LPTG_ECOLI (sp|P0ADC6) Lipopolysaccharide export system permease protein lptG OS=Escherichia coli (strain K12) GN=lptG PE=1 SV=1
glr1065 Blast Hits [sprot] LPSD_RHIME (sp|Q9R9N0) Lipopolysaccharide core biosynthesis glycosyltransferase lpsD OS=Rhizobium meliloti GN=lpsD PE=3 SV=1
glr0122 Blast Hits [TAIR_pep] AT1G63420.1 | Symbols: | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23850.1); Has 456 Blast hits to 452 proteins in 97 species: Archae - 0; Bacteria - 32; Metazoa - 199; Fungi - 74; Plants - 114; Viruses - 7; Other Eukaryotes - 30 (source: NCBI BLink). | chr1:23515874-23518777 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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