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Full-text search result: 145 genes by "726" TXT SET

Gloeobacter violaceus PCC 7421 (145 genes ) TXT SET

gll1625 InterPro NULL NULL; HMMPanther:PTHR22726 PTHR22726
gll0477 InterPro IPR003726 Homocysteine S-methyltransferase; Gene3D:G3DSA:3.20.20.330 S_methyl_trans
InterPro IPR003726 Homocysteine S-methyltransferase; HMMPfam:PF02574 S-methyl_trans
InterPro IPR003726 Homocysteine S-methyltransferase; ProfileScan:PS50970 HCY
InterPro IPR003726 Homocysteine S-methyltransferase; superfamily:SSF82282 S_methyl_trans
gll0709 InterPro IPR006197 Peptidase S24, LexA-like, conserved region; FPrintScan:PR00726 LEXASERPTASE
gll0726 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
InterPro IPR008538 Protein of unknown function DUF820; HMMPfam:PF05685 DUF820
Blast Hits [TAIR_pep] AT3G01650.1 | Symbols: RGLG1 | RGLG1 (RING domain Ligase1); protein binding / zinc ion binding | chr3:242734-245062 FORWARD
Blast Hits [nr] ref|NP_926959.1| hypothetical protein gll4013 [Gloeobacter violaceus PCC 7421] gi|35214587|dbj|BAC91954.1| gll4013 [Gloeobacter violaceus PCC 7421]
Blast Hits [pln_est] dbj|EE633099|EE633099 CHEL4233.b1_A03.ab1 CHE(LMS) serpentine sunflower Helianthus exilis cDNA clone CHEL4233, mRNA sequence.
Blast Hits [sprot] Y1290_SYNY3 (sp|P72821) Uncharacterized protein slr1290 OS=Synechocystis sp. (strain PCC 6803) GN=slr1290 PE=4 SV=1
gll0853 InterPro IPR017260 Uncharacterised conserved protein UCP037673; HMMPIR:PIRSF037673 UCP037673
gll2461 InterPro IPR007269 Isoprenylcysteine carboxyl methyltransferase; HMMPfam:PF04140 ICMT
gll3149 InterPro IPR015848 Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; HMMPfam:PF03726 PNPase
gll4416 InterPro IPR019664 Protein of unknown function DUF2518; HMMPfam:PF10726 DUF2518
gll3765 InterPro IPR003730 Multi-copper polyphenol oxidoreductase, laccase; HMMTigr:TIGR00726 DUF152
gll3877 InterPro NULL NULL; superfamily:SSF51726 SSF51726
glr1339 InterPro NULL NULL; HMMPanther:PTHR22726 PTHR22726
glr1726 Gene product putative transposase
Function Other categories: Transposon-related functions
InterPro IPR009057 Homeodomain-like; superfamily:SSF46689 Homeodomain_like
InterPro NULL NULL; HMMPfam:PF01710 Transposase_14
Blast Hits [TAIR_pep] AT3G13630.2 | Symbols: | unknown protein | chr3:4457038-4457989 FORWARD
Blast Hits [nr] ref|ZP_03271665.1| putative transposase [Arthrospira maxima CS-328] gi|209526157|ref|ZP_03274688.1| putative transposase [Arthrospira maxima CS-328] gi|209493413|gb|EDZ93737.1| putative transposase [Arthrospira maxima CS-328] gi|209496260|gb|EDZ96559.1| putative transposase [Arthrospira maxima CS-328]
Blast Hits [sprot] RUVX_RHIME (sp|Q92QL0) Putative Holliday junction resolvase OS=Rhizobium meliloti GN=R01309 PE=3 SV=1
glr2532 InterPro IPR008778 Pirin, C-terminal; HMMPfam:PF05726 Pirin_C
glr2614 InterPro IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase; HMMPfam:PF04131 NanE
glr3254 InterPro IPR007263 Putative thiol-disulphide oxidoreductase DCC; HMMPfam:PF04134 DUF393
glr4245 InterPro IPR007267 GtrA-like protein; HMMPfam:PF04138 GtrA
gsl2726 Gene product unknown protein
Function No similarity: No similarity
Blast Hits [TAIR_pep] AT3G01290.1 | Symbols: | band 7 family protein | chr3:88252-89356 REVERSE
Blast Hits [pln_est] gb|BQ122733|BQ122733 EST608309 GLSD Medicago truncatula cDNA clone pGLSD-29N6, mRNA sequence.
Blast Hits [sprot] Y1549_MYCTU (sp|Q10777) Uncharacterized protein Rv1549/MT1599.1 OS=Mycobacterium tuberculosis GN=Rv1549 PE=4 SV=1
glr3726 Gene product hypothetical protein
Function Conserved hypothetical protein: Conserved hypothetical protein
Blast Hits [TAIR_pep] AT4G10710.1 | Symbols: SPT16 | SPT16 (global transcription factor C) | chr4:6602226-6605450 REVERSE
Blast Hits [nr] ref|ZP_01629727.1| hypothetical protein N9414_18298 [Nodularia spumigena CCY9414] gi|119464758|gb|EAW45665.1| hypothetical protein N9414_18298 [Nodularia spumigena CCY9414]
Blast Hits [pln_est] dbj|EE624539|EE624539 CHWS2559.b1_M16.ab1 CHW(LMS) silverleaf sunflower Helianthus argophyllus cDNA clone CHWS2559, mRNA sequence.
Blast Hits [sprot] DCN1_CANGA (sp|Q6FJR2) Defective in cullin neddylation protein 1 OS=Candida glabrata GN=DCN1 PE=3 SV=1
glr1992 GO term Biological Process: regulation of cell cycle (GO:0051726)
Blast Hits [TAIR_pep] AT1G20880.1 | Symbols: | RNA recognition motif (RRM)-containing protein | chr1:7262879-7264834 REVERSE
glr2452 GO term Biological Process: small GTPase mediated signal transduction (GO:0007264)
gll0545 Blast Hits [nr] ref|ZP_01125015.1| possible DNA polymerase III beta subunit, C-te [Synechococcus sp. WH 7805] gi|88786726|gb|EAR17885.1| possible DNA polymerase III beta subunit, C-te [Synechococcus sp. WH 7805]
gll0760 Blast Hits [nr] ref|YP_829011.1| peptidase M14, carboxypeptidase A [Solibacter usitatus Ellin6076] gi|116230017|gb|ABJ88726.1| peptidase M14, carboxypeptidase A [Candidatus Solibacter usitatus Ellin6076]
gll1336 Blast Hits [nr] ref|YP_002485013.1| NusB antitermination factor [Cyanothece sp. PCC 7425] gi|254772629|sp|B8HYJ8.1|NUSB_CYAP4 RecName: Full=N utilization substance protein B homolog; Short=Protein nusB gi|219866313|gb|ACL46652.1| NusB antitermination factor [Cyanothece sp. PCC 7425]
gll1392 Blast Hits [nr] ref|YP_845698.1| adenylate kinases [Syntrophobacter fumaroxidans MPOB] gi|166220002|sp|A0LIL1.1|KAD_SYNFM RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|116698075|gb|ABK17263.1| Adenylate kinase [Syntrophobacter fumaroxidans MPOB]
gll1431 Blast Hits [nr] ref|YP_002379510.1| alpha amylase catalytic region [Cyanothece sp. PCC 7424] gi|218173909|gb|ACK72642.1| alpha amylase catalytic region [Cyanothece sp. PCC 7424]
gll1812 Blast Hits [nr] ref|YP_003572631.1| Conserved hypothetical protein, membrane [Salinibacter ruber] gi|294344901|emb|CBH25679.1| Conserved hypothetical protein, membrane [Salinibacter ruber M8]
gll2079 Blast Hits [nr] ref|YP_477268.1| radical SAM protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|123751708|sp|Q2JMN2.1|RLMN_SYNJB RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|86557048|gb|ABD02005.1| radical SAM enzyme, Cfr family [Synechococcus sp. JA-2-3B'a(2-13)]
gll2299 Blast Hits [nr] ref|NP_490368.1| hypothetical protein all7262 [Nostoc sp. PCC 7120] gi|17135800|dbj|BAB78346.1| all7262 [Nostoc sp. PCC 7120]
gll2330 Blast Hits [nr] ref|ZP_06305106.1| Peptidase M23B [Raphidiopsis brookii D9] gi|281197756|gb|EFA72650.1| Peptidase M23B [Raphidiopsis brookii D9]
gll2552 Blast Hits [nr] ref|YP_001867262.1| PAP fibrillin family protein [Nostoc punctiforme PCC 73102] gi|186466518|gb|ACC82319.1| PAP fibrillin family protein [Nostoc punctiforme PCC 73102]
gll3097 Blast Hits [nr] ref|YP_002379534.1| hypothetical protein PCC7424_4299 [Cyanothece sp. PCC 7424] gi|218173933|gb|ACK72666.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
gll3606 Blast Hits [nr] ref|YP_724160.1| hypothetical protein Tery_4726 [Trichodesmium erythraeum IMS101] gi|110169147|gb|ABG53687.1| hypothetical protein Tery_4726 [Trichodesmium erythraeum IMS101]
gll3708 Blast Hits [TAIR_pep] AT1G76550.1 | Symbols: | pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative | chr1:28722900-28726929 REVERSE
Blast Hits [nr] ref|NP_924726.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Gloeobacter violaceus PCC 7421] gi|35212346|dbj|BAC89721.1| gll1780 [Gloeobacter violaceus PCC 7421]
gll4013 Blast Hits [nr] ref|NP_923672.1| hypothetical protein gll0726 [Gloeobacter violaceus PCC 7421] gi|35211288|dbj|BAC88667.1| gll0726 [Gloeobacter violaceus PCC 7421]
gll4019 Blast Hits [nr] ref|YP_002378296.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7424] gi|218172695|gb|ACK71428.1| methionine-R-sulfoxide reductase [Cyanothece sp. PCC 7424]
gll4314 Blast Hits [nr] ref|ZP_01726249.1| imidazole glycerol phosphate synthase subunit HisF [Cyanothece sp. CCY0110] gi|126623450|gb|EAZ94154.1| imidazole glycerol phosphate synthase subunit HisF [Cyanothece sp. CCY0110]
glr0388 Blast Hits [nr] ref|ZP_05023527.1| Phosphoglucomutase/phosphomannomutase, C-terminal domain family [Microcoleus chthonoplastes PCC 7420] gi|196183743|gb|EDX78726.1| Phosphoglucomutase/phosphomannomutase, C-terminal domain family [Microcoleus chthonoplastes PCC 7420]
glr0834 Blast Hits [nr] ref|YP_001172650.1| M24/M37 family peptidase [Pseudomonas stutzeri A1501] gi|145570702|gb|ABP79808.1| peptidase, M23/M37 family [Pseudomonas stutzeri A1501]
glr1118 Blast Hits [nr] ref|YP_001804439.1| thiamine biosynthesis protein ThiC [Cyanothece sp. ATCC 51142] gi|226726954|sp|B1WW40.1|THIC_CYAA5 RecName: Full=Phosphomethylpyrimidine synthase; AltName: Full=Hydroxymethylpyrimidine phosphate synthase; Short=HMP-phosphate synthase; Short=HMP-P synthase; Short=HMPP synthase; AltName: Full=Thiamine biosynthesis protein thiC gi|171699392|gb|ACB52373.1| thiamine biosynthesis protein [Cyanothece sp. ATCC 51142]
glr1151 Blast Hits [nr] ref|ZP_03726520.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224801152|gb|EEG19475.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
glr1152 Blast Hits [nr] ref|ZP_03726521.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224801153|gb|EEG19476.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
glr1775 Blast Hits [nr] ref|YP_002378237.1| flavin reductase domain protein FMN-binding [Cyanothece sp. PCC 7424] gi|218172636|gb|ACK71369.1| flavin reductase domain protein FMN-binding [Cyanothece sp. PCC 7424]
glr2044 Blast Hits [nr] ref|YP_002371701.1| hypothetical protein PCC8801_1489 [Cyanothece sp. PCC 8801] gi|257059377|ref|YP_003137265.1| hypothetical protein Cyan8802_1517 [Cyanothece sp. PCC 8802] gi|218166808|gb|ACK65545.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] gi|256589543|gb|ACV00430.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
glr3355 Blast Hits [nr] ref|YP_324297.1| hypothetical protein Ava_3797 [Anabaena variabilis ATCC 29413] gi|75703726|gb|ABA23402.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
glr3439 Blast Hits [nr] ref|NP_440758.1| photosystem I P700 chlorophyll a apoprotein A2 [Synechocystis sp. PCC 6803] gi|2507265|sp|P29255.4|PSAB_SYNY3 RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2; AltName: Full=PsaB gi|1652517|dbj|BAA17438.1| P700 apoprotein subunit Ib [Synechocystis sp. PCC 6803]
glr3482 Blast Hits [nr] ref|YP_477267.1| M24B family peptidase [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557047|gb|ABD02004.1| peptidase, M24B family [Synechococcus sp. JA-2-3B'a(2-13)]
glr4398 Blast Hits [nr] ref|YP_002379552.1| hypothetical protein PCC7424_4317 [Cyanothece sp. PCC 7424] gi|218173951|gb|ACK72684.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
gsl1443 Blast Hits [nr] ref|YP_473692.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab] gi|86608723|ref|YP_477485.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86553471|gb|ABC98429.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab] gi|86557265|gb|ABD02222.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Blast Hits [sprot] HEMH_SYNP2 (sp|B1XL79) Ferrochelatase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemH PE=3 SV=1
gsr0488 Blast Hits [nr] ref|ZP_06972619.1| cold-shock DNA-binding domain protein [Ktedonobacter racemifer DSM 44963] gi|297551473|gb|EFH85339.1| cold-shock DNA-binding domain protein [Ktedonobacter racemifer DSM 44963]
gsr2010 Blast Hits [nr] ref|YP_002378300.1| protein of unknown function YGGT [Cyanothece sp. PCC 7424] gi|218172699|gb|ACK71432.1| protein of unknown function YGGT [Cyanothece sp. PCC 7424]
gsr4145 Blast Hits [nr] ref|YP_003557260.1| uncharacterized iron-regulated membrane protein [Shewanella violacea DSS12] gi|293327751|dbj|BAJ02482.1| uncharacterized iron-regulated membrane protein [Shewanella violacea DSS12]
gll0114 Blast Hits [sprot] Y1392_SYNP2 (sp|P31972) Uncharacterized protein SYNPCC7002_A1392 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1392 PE=4 SV=1
gll0654 Blast Hits [sprot] NDHI_SYNP2 (sp|Q8KX59) NAD(P)H-quinone oxidoreductase subunit I OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhI PE=3 SV=1
gll1132 Blast Hits [sprot] RUVX_SYNP2 (sp|B1XJ08) Putative Holliday junction resolvase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A0946 PE=3 SV=1
gll1203 Blast Hits [sprot] CTPA_SYNP2 (sp|P42784) Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
gll1619 Blast Hits [sprot] Y1628_SYNP2 (sp|P28606) Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1628 PE=3 SV=2
gll2135 Blast Hits [sprot] Y1590_SYNP2 (sp|P31525) Uncharacterized protein SYNPCC7002_A1590 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1590 PE=4 SV=2
gll2174 Blast Hits [sprot] Y1128_SYNY3 (sp|P72655) Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803) GN=slr1128 PE=3 SV=1
gll2242 Blast Hits [sprot] RPOC1_SYNP2 (sp|Q55085) DNA-directed RNA polymerase subunit gamma OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpoC1 PE=3 SV=2
gll4381 Blast Hits [sprot] RSME_SYNY3 (sp|P72667) Ribosomal RNA small subunit methyltransferase E OS=Synechocystis sp. (strain PCC 6803) GN=rsmE PE=3 SV=1
glr0626 Blast Hits [sprot] CTPA_SYNP2 (sp|P42784) Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
glr0748 Blast Hits [sprot] NU3C_SYNP2 (sp|Q8KX40) NAD(P)H-quinone oxidoreductase subunit 3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhC PE=3 SV=1
glr1387 Blast Hits [sprot] EXBL3_SYNY3 (sp|P72604) Putative biopolymer transport protein exbB-like 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1404 PE=3 SV=1
glr1506 Blast Hits [sprot] RNE_SYNY3 (sp|P72656) Ribonuclease E homolog OS=Synechocystis sp. (strain PCC 6803) GN=rne PE=3 SV=1
glr1699 Blast Hits [sprot] PIMT_SYNP2 (sp|B1XQE1) Protein-L-isoaspartate O-methyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pcm PE=3 SV=1
glr2021 Blast Hits [sprot] CCS1_SYNP2 (sp|O68616) Cytochrome c biogenesis protein ccsB OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ccsB PE=3 SV=1
glr2402 Blast Hits [sprot] EXBL3_SYNY3 (sp|P72604) Putative biopolymer transport protein exbB-like 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1404 PE=3 SV=1
glr2433 Blast Hits [sprot] LEP4_SYNY3 (sp|P72640) Type 4 prepilin-like proteins leader peptide-processing enzyme OS=Synechocystis sp. (strain PCC 6803) GN=hofD PE=3 SV=1
glr2599 Blast Hits [sprot] NU5C_SYNP2 (sp|P31971) NAD(P)H-quinone oxidoreductase chain 5 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhF PE=3 SV=2
glr2746 Blast Hits [sprot] RPSD_BACSU (sp|P10726) RNA polymerase sigma-D factor OS=Bacillus subtilis GN=sigD PE=1 SV=2
glr3888 Blast Hits [sprot] Y3001_SYNP2 (sp|Q52149) Uncharacterized protein SYNPCC7002_B0001 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_B0001 PE=4 SV=2
glr4015 Blast Hits [sprot] MIAB_SYNP2 (sp|B1XQK7) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=miaB PE=3 SV=1
glr4128 Blast Hits [sprot] Y851_SYNP2 (sp|P32040) Probable transcriptional regulatory protein SYNPCC7002_A0851 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A0851 PE=3 SV=2
gsl2529 Blast Hits [sprot] RS21_SYNP2 (sp|B1XPL6) 30S ribosomal protein S21 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsU PE=3 SV=1
gsl3078 Blast Hits [sprot] SYGA_SYNP2 (sp|B1XNV4) Glycyl-tRNA synthetase alpha subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glyQ PE=3 SV=1
gsl3287 Blast Hits [sprot] PSAC_SYNP2 (sp|P31087) Photosystem I iron-sulfur center OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaC PE=1 SV=2
gsr2518 Blast Hits [sprot] LEUC_DESVH (sp|Q726X4) 3-isopropylmalate dehydratase large subunit OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuC PE=3 SV=1
gll0027 Blast Hits [pln_est] gb|GE268353|GE268353 CBWF7260.g1 CBWF Chlorella sp. NC64A EST library (M) Chlorella sp. NC64A cDNA clone CBWF7260 3', mRNA sequence.
gll0699 Blast Hits [pln_est] gb|CJ669726|CJ669726 CJ669726 Y.Ogihara unpublished cDNA library Wh_KMV Triticum aestivum cDNA clone whkv19m11 5', mRNA sequence.
gll0881 Blast Hits [pln_est] dbj|DV161695|DV161695 KP1B.108O12F.050726T7 KP1B Nicotiana tabacum cDNA clone KP1B.108O12, mRNA sequence.
gll1453 Blast Hits [pln_est] dbj|DV964726|DV964726 GC02715 Gracilaria changii cDNA library Gracilaria changii cDNA clone 71-G7-T3, mRNA sequence.
gll1897 Blast Hits [pln_est] gb|CK272605|CK272605 EST718683 potato abiotic stress cDNA library Solanum tuberosum cDNA clone POAD625 5' end, mRNA sequence.
gll2186 Blast Hits [pln_est] gb|CK157266|CK157266 FGAS038363 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA, mRNA sequence.
gll2677 Blast Hits [pln_est] gb|CU572651|CU572651 CU572651 HYPO23I_KZ0AAP Theobroma cacao cDNA clone KZ0AAP1YK20RM1, mRNA sequence.
gll3112 Blast Hits [pln_est] dbj|DV161543|DV161543 KP1B.108H03F.050726T7 KP1B Nicotiana tabacum cDNA clone KP1B.108H03, mRNA sequence.
gll3300 Blast Hits [pln_est] dbj|DN147265|DN147265 4901_A01_A01 Switchgrass leaf cDNA library Panicum virgatum cDNA clone 4901_A01_A01, mRNA sequence.
gll3457 Blast Hits [pln_est] gb|FE509767|FE509767 CAOU15726.fwd CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU15726 5', mRNA sequence.
gll3515 Blast Hits [pln_est] emb|AI726950|AI726950 BNLGHi6907 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to (U43683) S-adenosyl-L-methionine:delta24-sterol-C- methyltransferase [Glycine max], mRNA sequence.
gll3551 Blast Hits [pln_est] dbj|EX272616|EX272616 1453211_5_J17_071 PY06 Carica papaya cDNA, mRNA sequence.
gll3598 Blast Hits [pln_est] dbj|EE620554|EE620554 CHWM7726.b1_K11.ab1 CHW(LMS) silverleaf sunflower Helianthus argophyllus cDNA clone CHWM7726, mRNA sequence.
gll3649 Blast Hits [pln_est] gb|FP073112|FP073112 FP073112 LG0AAD Quercus robur cDNA clone LG0AAD14YL02RM1 similar to VA726_ARATH Putative vesicle-associated membrane protein 726 . - Arabidopsis thaliana, mRNA sequence.
glr0112 Blast Hits [pln_est] dbj|EV272641|EV272641 GLMBM37TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence.
glr1090 Blast Hits [TAIR_pep] AT1G47260.1 | Symbols: APFI, GAMMA CA2 | GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase | chr1:17321384-17323347 REVERSE
Blast Hits [pln_est] dbj|EL587263|EL587263 65JKBNM0_T3_007_D06_16MAR2005_042 65JKBNM0 Brassica napus cDNA 5', mRNA sequence.
glr2399 Blast Hits [pln_est] gb|GO599923|GO599923 726 ethophon treated Ophiopogon japonicus ( L. f . ) KerGawl cDNA library Ophiopogon japonicus cDNA 5', mRNA sequence.
glr3554 Blast Hits [pln_est] gb|GO599923|GO599923 726 ethophon treated Ophiopogon japonicus ( L. f . ) KerGawl cDNA library Ophiopogon japonicus cDNA 5', mRNA sequence.
gsl0845 Blast Hits [pln_est] gb|CJ772689|CJ772689 CJ772689 Ipomoea nil shoot 8-days old seedling Ipomoea nil cDNA clone jmsf46g17 3', mRNA sequence.
gsl2882 Blast Hits [pln_est] dbj|EG716470|EG716470 GTE00007269 Guillardia theta non-normalised Guillardia theta cDNA, mRNA sequence.
gll0022 Blast Hits [TAIR_pep] AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGULATOR 12); transcription factor/ two-component response regulator | chr2:10724490-10726961 REVERSE
gll0032 Blast Hits [TAIR_pep] AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase | chr1:26814726-26815529 FORWARD
gll0208 Blast Hits [TAIR_pep] AT5G08440.1 | Symbols: | unknown protein | chr5:2721037-2726970 FORWARD
gll0473 Blast Hits [TAIR_pep] AT1G21640.1 | Symbols: NADK2, ATNADK2 | NADK2; NAD+ kinase/ calmodulin binding | chr1:7588726-7592669 FORWARD
gll1127 Blast Hits [TAIR_pep] AT2G17265.1 | Symbols: HSK | HSK (HOMOSERINE KINASE); homoserine kinase | chr2:7508606-7509718 FORWARD
gll1330 Blast Hits [TAIR_pep] AT5G17790.1 | Symbols: VAR3 | VAR3 (VARIEGATED 3); binding / zinc ion binding | chr5:5869810-5872671 REVERSE
gll1409 Blast Hits [TAIR_pep] AT1G15830.1 | Symbols: | unknown protein | chr1:5448726-5450177 FORWARD
gll1737 Blast Hits [TAIR_pep] AT1G08100.1 | Symbols: ATNRT2.2, ACH2, NRT2;2AT, NRT2.2 | NRT2.2 (NITRATE TRANSPORTER 2.2); nitrate transmembrane transporter | chr1:2527268-2529078 REVERSE
gll1829 Blast Hits [TAIR_pep] AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARD
gll1952 Blast Hits [TAIR_pep] AT5G24150.2 | Symbols: SQP1 | SQP1; squalene monooxygenase | chr5:8172670-8175395 REVERSE
gll2093 Blast Hits [TAIR_pep] AT1G47260.1 | Symbols: APFI, GAMMA CA2 | GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase | chr1:17321384-17323347 REVERSE
gll2201 Blast Hits [TAIR_pep] AT4G00520.3 | Symbols: | acyl-CoA thioesterase family protein | chr4:227726-231249 FORWARD
gll2444 Blast Hits [TAIR_pep] AT1G68830.1 | Symbols: STN7 | STN7 (Stt7 homolog STN7); kinase/ protein kinase | chr1:25872654-25875473 REVERSE
gll2542 Blast Hits [TAIR_pep] AT4G17260.1 | Symbols: | L-lactate dehydrogenase, putative | chr4:9674057-9675309 FORWARD
gll2930 Blast Hits [TAIR_pep] AT3G28460.1 | Symbols: | unknown protein | chr3:10672673-10674297 REVERSE
gll3044 Blast Hits [TAIR_pep] AT4G39240.1 | Symbols: | kelch repeat-containing F-box family protein | chr4:18269599-18270726 REVERSE
gll3143 Blast Hits [TAIR_pep] AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:16987269-16989851 FORWARD
gll3324 Blast Hits [TAIR_pep] AT4G17260.1 | Symbols: | L-lactate dehydrogenase, putative | chr4:9674057-9675309 FORWARD
gll3525 Blast Hits [TAIR_pep] AT1G21640.1 | Symbols: NADK2, ATNADK2 | NADK2; NAD+ kinase/ calmodulin binding | chr1:7588726-7592669 FORWARD
gll3568 Blast Hits [TAIR_pep] AT3G17265.1 | Symbols: | F-box family protein | chr3:5899515-5900637 REVERSE
gll3883 Blast Hits [TAIR_pep] AT1G27920.1 | Symbols: MAP65-8 | MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8) | chr1:9726948-9729848 FORWARD
gll3911 Blast Hits [TAIR_pep] AT1G48350.1 | Symbols: | ribosomal protein L18 family protein | chr1:17867269-17868215 FORWARD
glr0088 Blast Hits [TAIR_pep] AT5G41140.1 | Symbols: | unknown protein | chr5:16468726-16472546 FORWARD
glr0191 Blast Hits [TAIR_pep] AT1G71100.1 | Symbols: RSW10 | RSW10 (RADIAL SWELLING 10); ribose-5-phosphate isomerase | chr1:26814726-26815529 FORWARD
glr0447 Blast Hits [TAIR_pep] AT5G39260.1 | Symbols: ATEXPA21, EXP21, ATEXP21, ATHEXP ALPHA 1.20 | ATEXPA21 (ARABIDOPSIS THALIANA EXPANSIN A21) | chr5:15726479-15727416 REVERSE
glr0497 Blast Hits [TAIR_pep] AT3G53230.1 | Symbols: | cell division cycle protein 48, putative / CDC48, putative | chr3:19723416-19726489 FORWARD
glr0798 Blast Hits [TAIR_pep] AT3G59760.3 | Symbols: OASC, ATCS-C | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C); ATP binding / cysteine synthase | chr3:22072668-22075345 REVERSE
glr0935 Blast Hits [TAIR_pep] AT1G79010.1 | Symbols: | NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) | chr1:29725138-29726933 REVERSE
glr1116 Blast Hits [TAIR_pep] AT1G20870.1 | Symbols: | LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54850.1); Has 48 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:7259287-7260775 REVERSE
glr1350 Blast Hits [TAIR_pep] AT3G07260.1 | Symbols: | forkhead-associated domain-containing protein / FHA domain-containing protein | chr3:2309704-2310630 FORWARD
glr1552 Blast Hits [TAIR_pep] AT2G17890.1 | Symbols: CPK16 | CPK16; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ protein kinase/ protein serine/threonine kinase | chr2:7769885-7772627 REVERSE
glr1649 Blast Hits [TAIR_pep] AT3G53230.1 | Symbols: | cell division cycle protein 48, putative / CDC48, putative | chr3:19723416-19726489 FORWARD
glr2033 Blast Hits [TAIR_pep] AT4G35150.1 | Symbols: | O-methyltransferase family 2 protein | chr4:16726948-16728531 REVERSE
glr2119 Blast Hits [TAIR_pep] AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | chr3:20070550-20072625 FORWARD
glr2331 Blast Hits [TAIR_pep] AT5G24150.2 | Symbols: SQP1 | SQP1; squalene monooxygenase | chr5:8172670-8175395 REVERSE
glr2487 Blast Hits [TAIR_pep] AT1G76550.1 | Symbols: | pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative | chr1:28722900-28726929 REVERSE
glr2977 Blast Hits [TAIR_pep] AT4G36580.1 | Symbols: | AAA-type ATPase family protein | chr4:17257958-17260661 FORWARD
glr3419 Blast Hits [TAIR_pep] AT5G47260.1 | Symbols: | ATP binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding | chr5:19189411-19192516 FORWARD
glr3565 Blast Hits [TAIR_pep] AT3G20780.1 | Symbols: ATTOP6B, BIN3, HYP6, RHL3 | ATTOP6B (topoisomerase 6 subunit B); DNA topoisomerase (ATP-hydrolyzing)/ identical protein binding / protein binding | chr3:7264025-7268498 REVERSE
glr3790 Blast Hits [TAIR_pep] AT3G56620.1 | Symbols: | integral membrane family protein / nodulin MtN21-related | chr3:20972696-20974495 REVERSE
glr3897 Blast Hits [TAIR_pep] AT1G75350.1 | Symbols: emb2184 | emb2184 (embryo defective 2184); structural constituent of ribosome | chr1:28272163-28272687 FORWARD
glr4144 Blast Hits [TAIR_pep] AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARD
glr4297 Blast Hits [TAIR_pep] AT5G37190.1 | Symbols: CIP4 | CIP4 (COP1-interacting protein 4); transcription cofactor | chr5:14723362-14726694 REVERSE
gsl0810 Blast Hits [TAIR_pep] AT4G26920.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, leaf; EXPRESSED DURING: LP.04 four leaves visible, 4 leaf senescence stage, LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana protein match is: homeobox protein-related (TAIR:AT5G07260.1); Has 294 Blast hits to 227 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 294; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:13525031-13527172 FORWARD
gsl1280 Blast Hits [TAIR_pep] AT5G57260.1 | Symbols: CYP71B10 | CYP71B10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | chr5:23198694-23200273 REVERSE
gsr2462 Blast Hits [TAIR_pep] AT3G28650.1 | Symbols: | DC1 domain-containing protein | chr3:10735729-10737726 FORWARD
gsr3238 Blast Hits [TAIR_pep] AT3G46870.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:17263011-17264022 FORWARD
gsr4420 Blast Hits [TAIR_pep] AT1G75350.1 | Symbols: emb2184 | emb2184 (embryo defective 2184); structural constituent of ribosome | chr1:28272163-28272687 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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