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Full-text search result: 16 genes by "1158" TXT SET

Gloeobacter violaceus PCC 7421 (16 genes ) TXT SET

gll2103 InterPro NULL NULL; HMMPanther:PTHR11584 PTHR11584
glr1158 Gene product RNA polymerase ECF-type (group 3) sigma factor
Function Transcription: RNA synthesis, modification, and DNA transcription
GO term Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
GO term Biological Process: transcription initiation (GO:0006352)
GO term Molecular Function: DNA binding (GO:0003677)
GO term Molecular Function: sigma factor activity (GO:0016987)
GO term Molecular Function: transcription factor activity (GO:0003700)
InterPro IPR007627 RNA polymerase sigma-70 region 2; HMMPfam:PF04542 Sigma70_r2
InterPro IPR013249 RNA polymerase sigma factor 70, region 4 type 2; HMMPfam:PF08281 Sigma70_r4_2
InterPro IPR013324 RNA polymerase sigma factor, region 3/4; superfamily:SSF88659 Sigma_r3_r4
InterPro IPR013325 RNA polymerase sigma factor, region 2; superfamily:SSF88946 Sigma_r2
InterPro IPR014284 RNA polymerase sigma-70; HMMTigr:TIGR02937 sigma70-ECF
InterPro NULL NULL; Gene3D:G3DSA:1.10.1740.10 G3DSA:1.10.1740.10
Blast Hits [TAIR_pep] AT3G47910.2 | Symbols: | ubiquitin thiolesterase/ zinc ion binding | chr3:17674737-17681444 REVERSE
Blast Hits [nr] ref|NP_486233.1| RNA polymerase sigma factor [Nostoc sp. PCC 7120] gi|17131284|dbj|BAB73892.1| all2193 [Nostoc sp. PCC 7120]
Blast Hits [pln_est] gb|FG603474|FG603474 PF_T3_52R_F07_14AUG2003_053 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
Blast Hits [sprot] SIGK_MYCUA (sp|A0PNM4) RNA polymerase sigma factor sigK OS=Mycobacterium ulcerans (strain Agy99) GN=sigK PE=3 SV=1
glr2933 InterPro IPR001518 Argininosuccinate synthase; HMMPanther:PTHR11587 Arginosuc_synth
gll1436 Blast Hits [nr] ref|YP_001158879.1| activator of Hsp90 ATPase 1 family protein [Salinispora tropica CNB-440] gi|145303919|gb|ABP54501.1| Activator of Hsp90 ATPase 1 family protein [Salinispora tropica CNB-440]
glr0154 Blast Hits [nr] ref|XP_002556912.1| Pc12g00060 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581531|emb|CAP79633.1| Pc12g00060 [Penicillium chrysogenum Wisconsin 54-1255]
glr2102 Blast Hits [nr] ref|XP_002562158.1| Pc18g03180 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586891|emb|CAP94542.1| Pc18g03180 [Penicillium chrysogenum Wisconsin 54-1255]
glr2609 Blast Hits [nr] ref|ZP_01127021.1| hypothetical protein NB231_05160 [Nitrococcus mobilis Nb-231] gi|88791158|gb|EAR22271.1| hypothetical protein NB231_05160 [Nitrococcus mobilis Nb-231]
glr4084 Blast Hits [nr] ref|XP_002558258.1| Pc12g14530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582877|emb|CAP81080.1| Pc12g14530 [Penicillium chrysogenum Wisconsin 54-1255]
glr2436 Blast Hits [sprot] SYS_XANP2 (sp|A7INN1) Seryl-tRNA synthetase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=serS PE=3 SV=1
glr1263 Blast Hits [pln_est] dbj|DV963185|DV963185 GC01158 Gracilaria changii cDNA library Gracilaria changii cDNA clone 140-C07-T3, mRNA sequence.
gll0495 Blast Hits [TAIR_pep] AT1G77460.1 | Symbols: | binding | chr1:29104378-29111580 FORWARD
gll2095 Blast Hits [TAIR_pep] AT2G27110.3 | Symbols: FRS3 | FRS3 (FAR1-related sequence 3); zinc ion binding | chr2:11576969-11580259 REVERSE
glr1401 Blast Hits [TAIR_pep] AT1G31220.1 | Symbols: | phosphoribosylglycinamide formyltransferase | chr1:11157064-11158408 FORWARD
glr1804 Blast Hits [TAIR_pep] AT1G77460.1 | Symbols: | binding | chr1:29104378-29111580 FORWARD
glr3775 Blast Hits [TAIR_pep] AT1G31230.1 | Symbols: AK-HSDH I, AK-HSDH | AK-HSDH I (ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I); aspartate kinase/ homoserine dehydrogenase | chr1:11158744-11163055 REVERSE
gsl3977 Blast Hits [TAIR_pep] AT5G40310.1 | Symbols: | exonuclease family protein | chr5:16113272-16115816 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
0.894178607

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