cyanobase » Synechococcus elongatus PCC 6301 » genes » syc1218_c

GeneView: syc1218_c

GFF3

GeneAnnotation

? | +/- | Top
ID syc1218_c
Type protein_coding_gene
Gene symbol
psbO
Gene symbolExtracted from literature
Gene product

photosystem II PsbO protein

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthesis (GO:0015979 External)
  • Biological Process: photosystem II stabilization (GO:0042549 External)
  • Cellular Component: extrinsic to membrane (GO:0019898 External)
  • Cellular Component: oxygen evolving complex (GO:0009654 External)
  • Molecular Function: calcium ion binding (GO:0005509 External)

Genomic context

? | +/- | Top
Location Chr:1329657..1330490
Strand complement
Genomic context

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length834 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length277 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Table view by InterProScan External
show/hide
TableView
GFF3

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

References

? | +/- | Top

External links

? | +/- | Top

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000010065.1/orthologs/syc1218_c.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase