cyanobase » Synechocystis sp. PCC 6803 » genes » ssl0563

GeneView: ssl0563

GFF3

GeneAnnotation

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ID ssl0563
Type protein_coding_gene
Gene symbol
psaC
Gene symbolExtracted from literature
psaC, psaC2, ssl0563
Gene product

photosystem I subunit VII

Gene productExtracted from literature
PsaC
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthetic electron transport in photosystem I (GO:0009773 External)
  • Cellular Component: thylakoid membrane (GO:0042651 External)
  • Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539 External)
  • Molecular Function: electron carrier activity (GO:0009055 External)
  • Molecular Function: iron-sulfur cluster binding (GO:0051536 External)

Genomic context

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Location Chr:2287334..2287579
Strand complement
Genomic context

Transcript

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Nucleotide sequence
FNA
Length246 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length81 AA.

Protein families, domains and functional sites

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Table view by InterProScan External
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TableView
GFF3

Mutants

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Mutant: CDK25
Genes and Mutantsposted by Lee McIntosh <mcintos1 at pilot.msu.edu> at 1998-03-13
MutantNameCDK25
GeneNamepsaC
ProductNamePsaC; Photosystem I subunit VII
FunctionA component of photosystem I
GeneticBackgroundNot examined
DNAyes
Phenotypeyes
PhenotypeDetailsUnable to grow photoautotrophically. Lack PsaC, PsaD, and PsaE subunits in isolated thylakoid membranes, while PsaA/PsaB and PsaF subunits were found. Electron transfer from P700 to Fx was detected.
AdditionalInformationA kanamicin resistance cassette was inserted into the Xba1 site in the psaC gene.. Published as: Absence of PsaC subunit allows assembly of photosystem I core but prevents the binding of PsaD and PsaE in Synechocystis sp. PCC 6803. by Jianping Yu, Lawrence B. Smart, Yean-Sung Jung, John Golbeck and Lee McIntosh. Plant Molecular biology 29: 331-342, 1995.. Lee McIntosh. MSU-DOE Plant Research Laboratory. Michigan State University. East Lansing, MI 48824-1312 USA. Phone: (517) 353-7802. Fax: (517) 353-9168
Medline7579183
Mutant: C14D; C14S; C14A; C51D; C51S; C51A; C14D/C51D
Genes and Mutantsposted by Lee McIntosh <mcintos1 at pilot.msu.edu> at 1998-03-13
MutantNameC14D; C14S; C14A; C51D; C51S; C51A; C14D/C51D
GeneNamepsaC
ProductNamePsaC; photosystem I subunit VII
FunctionA component of photosystem I
GeneticBackgroundNot examined
DNAyes
Phenotypeyes
PhenotypeDetailsUnable to grow photoautotrophically under white light. Reduced levels of PSI subunits PsaC, PsaD, and PsaE in isolated thylakoid membranes.
AdditionalInformationThe psaC coding region was replaced by a kanamicin resistance cassette to create a recipient strain for site-directed mutagenesis. Cysteine 14 and 51 were changed to aspatate, serine, and alanine, respectively.. Published as: I. Strains of Synechocystis sp. PCC 6803 with altered PsaC. I. Mutations incorporated in the cysteine ligands of the two [4Fe-4S] clusters FA and FB of photosystem I. By Jianping Yu, Ilya R. Vassiliev, Yean-Sung Jung, John H. Golbeck, and Lee McIntosh. In the Journal of Biological Chemistry 272, 8032-8039, 1997.. II. Strains of Synechocystis sp. PCC 6803 with altered PsaC. II. EPR and optical spectroscopic properties of FA and FB in aspartate, serine, and alanine replacements of cysteines 14 and 51. By Yean-Sung Jung, Ilya R. Vassiliev, Jianping Yu, Lee McIntosh and John H. Golbeck. In the Journal of Biological Chemistry 272, 8040-8049, 1997.. Lee McIntosh. MSU-DOE Plant Research Laboratory. Michigan State University. East Lansing, MI 48824-1312 USA. Phone: (517) 353-7802. Fax: (517) 353-9168
Medline9065476; 9065477
Mutant: Δssl0563 K
Genes and Mutantsposted by Teruo Ogawa <ogawater at xd6.so-net.ne.jp> at 2003-05-08
MutantNameΔssl0563 K
GeneticBackgroundGT
DNAno
DrugMarkerKm
AdditionalInformationOGAWA_COLLECTION_7-43

Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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References

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External links

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API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009725.1/orthologs/ssl0563.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase