cyanobase » Nostoc sp. PCC 7120 » genes » asl0883

GeneView: asl0883

GFF3

GeneAnnotation

? | +/- | Top
ID asl0883
Type protein_coding_gene
Gene symbol
psbM
Gene symbolExtracted from literature
Gene product

photosystem II protein PsbM

Gene productExtracted from literature
Functional category
Gene Ontology
[IEA]
ipr2go
  • Biological Process: photosynthesis, light reaction (GO:0019684 External)
  • Cellular Component: integral to membrane (GO:0016021 External)
  • Cellular Component: photosystem II (GO:0009523 External)

Genomic context

? | +/- | Top
Location Chr:1019083..1019199
Strand complement
Genomic context

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length117 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length38 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Table view by InterProScan External
show/hide
TableView
GFF3

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

References

? | +/- | Top

External links

? | +/- | Top

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
  • /cyanobase/GCA_000009705.1/orthologs/asl0883.gff3 -- GFF3.
  • InterProScan matches

    MicrobeBase