rhizobase » Rhizobium sp. NGR234 » genes » NGR_c07090

GeneView: NGR_c07090

GFF3

GeneAnnotation

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ID NGR_c07090
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

glutathione S-transferase

Gene productExtracted from literature
Functional category Posttranslational modification, protein turnover, chaperones
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:770433..771056 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length624 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length207 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Ngr234abc:ngr_c07090
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

RhizoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop :NGR_c07090 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG NGR_c07090 External -- Phylogenetic classification of ortholog.
  • MBGD rhi:NGR_c07090 External -- The automated construction of orthologous groups.
  • Gclust *NGR_c07090* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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