rhizobase » Mesorhizobium loti MAFF303099 » genes » mll8063

GeneView: mll8063

GFF3

GeneAnnotation

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ID mll8063
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

similar to ATP-dependent DNA ligase

Gene productExtracted from literature
Functional category DNA replication, recombination, and repair
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:6636327..6637343 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1017 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length338 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Mesorhizobium:mll8063
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Protein-Protein Interaction experiments

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Sato2007

PMID:18000013

Homology search results (Blast2)

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show/hide TableView GFF3

RhizoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG mll8063 External -- Phylogenetic classification of ortholog.
  • MBGD mlo:mll8063 External -- The automated construction of orthologous groups.
  • Gclust *mll8063* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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