rhizobase » Frankia alni ACN14a » genes » FRAAL3375

GeneView: FRAAL3375

GFF3

GeneAnnotation

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ID FRAAL3375
Type protein_coding_gene
Gene symbol
aldH
Gene symbolExtracted from literature
Gene product

acetaldehyde dehydrogenase

Gene productExtracted from literature
Functional category Energy production and conversion
Gene Ontology
[IEA]
ipr2go
  • Biological Process: metabolic process (GO:0008152 External)
  • Biological Process: oxidation reduction (GO:0055114 External)
  • Molecular Function: oxidoreductase activity (GO:0016491 External)

Genomic context

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Location Chr:3659011..3660390 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1380 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length459 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Fraal:fraal3375
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 73 94 21
117 139 22

Mutants

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Homology search results (Blast2)

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RhizoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG FRAAL3375 External -- Phylogenetic classification of ortholog.
  • MBGD fal:FRAAL3375 External -- The automated construction of orthologous groups.
  • Gclust *FRAAL3375* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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