rhizobase » Bradyrhizobium japonicum USDA110 » genes » blr2955

GeneView: blr2955

GFF3

GeneAnnotation

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ID blr2955
Type protein_coding_gene
Gene symbol
ppc
Gene symbolExtracted from literature
ppc
Gene product

PEP carboxylase

Gene productExtracted from literature
Functional category Other
Gene Ontology
[IEA]
ipr2go
  • Biological Process: tricarboxylic acid cycle (GO:0006099 External)
  • Molecular Function: catalytic activity (GO:0003824 External)
  • Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964 External)

Genomic context

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Location Chr:3257065..3259863 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length2799 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length932 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Bradyrhizobium:blr2955
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

RhizoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG blr2955 External -- Phylogenetic classification of ortholog.
  • MBGD bja:blr2955 External -- The automated construction of orthologous groups.
  • Gclust *blr2955* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

RhizoBase

Kazusa DNA Research Institute

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