cyanobase » Thermosynechococcus elongatus BP-1 » genes » tll1504

GeneView: tll1504

GFF3

GeneAnnotation

? | +/- | Top
ID tll1504
Type protein_coding_gene
Gene symbol
rbcS
Gene symbolExtracted from literature
rbcS
Gene product

ribulose bisphosphate carboxylase small subunit

Gene productExtracted from literature
Functional category CO2 fixation
Gene Ontology
[IEA]
ipr2go
  • Biological Process: carbon utilization by fixation of carbon dioxide (GO:0015977 External)
  • Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984 External)

Genomic context

? | +/- | Top
Location Chr:1573812..1574168 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

? | +/- | Top
Nucleotide sequence
FNA
Length357 nt
Sequence retrieving

Peptide

? | +/- | Top
Translated sequence
FAA
Length118 AA.

Protein families, domains and functional sites

? | +/- | Top
Graphical view by InterProScan External
show/hide
PNG
Thermo:tll1504
Table view by InterProScan External
show/hide
TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

? | +/- | Top

Homology search results (Blast2)

? | +/- | Top
show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

? | +/- | Top
show/hide TableView GFF3

Geneset

? | +/- | Top

Variation

? | +/- | Top

References

? | +/- | Top

External links

? | +/- | Top
Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG tll1504 External -- Phylogenetic classification of ortholog.
  • MBGD tel:tll1504 External -- The automated construction of orthologous groups.
  • Gclust *tll1504* External -- trans-kingdom classification of proteins.
Phenotype database

API

? | +/- | Top
Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

Licence and disclaimer