cyanobase » Synechocystis sp. PCC 6803 » genes » sll1147

GeneView: sll1147

GFF3

GeneAnnotation

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ID sll1147
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
hik2, sll1147
Gene product

glutathione S-transferase

Gene productExtracted from literature
Hik2
Functional category Thioredoxin, glutaredoxin, and glutathione
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:1400488..1400901 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length414 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length137 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Synechocystis:sll1147
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
 FromToLength(A.A.)
Transmembrane segments 7 29 22
77 99 22
108 130 22

Mutants

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Protein-Protein Interaction experiments

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Sato2007

PMID:18000013

Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG sll1147 External -- Phylogenetic classification of ortholog.
  • MBGD syn:sll1147 External -- The automated construction of orthologous groups.
  • Gclust *sll1147* External -- trans-kingdom classification of proteins.
Phenotype database
  • Fluorome sll1147 External -- The Cyanobacterial Chlorophyll Fluorescence Database.

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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