cyanobase » Rhodopseudomonas palustris CGA009 » genes » RPA3252

GeneView: RPA3252

GFF3

GeneAnnotation

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ID RPA3252
Type protein_coding_gene
Gene symbol
tufA, EF-Tu
Gene symbolExtracted from literature
Gene product

elongation factor Tu

Gene productExtracted from literature
Functional category Translation, Ribosomal Structure and Biogenesis
Gene Ontology
[IEA]
ipr2go
  • Biological Process: translational elongation (GO:0006414 External)
  • Cellular Component: intracellular (GO:0005622 External)
  • Molecular Function: GTP binding (GO:0005525 External)
  • Molecular Function: GTPase activity (GO:0003924 External)
  • Molecular Function: translation elongation factor activity (GO:0003746 External)

Genomic context

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Location Chr:3659926..3661116 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1191 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length396 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Rhodopseudomonas:rpa3252
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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CyanoBase Ortholog table (blast reciprocal best hit pairs)

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Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG RPA3252 External -- Phylogenetic classification of ortholog.
  • MBGD rpa:RPA3252 External -- The automated construction of orthologous groups.
  • Gclust *RPA3252* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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