cyanobase » Synechococcus elongatus PCC 6301 » genes » syc1953_c

GeneView: syc1953_c

GFF3

GeneAnnotation

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ID syc1953_c
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

probable glutathione S-transferase

Gene productExtracted from literature
Functional category Thioredoxin, glutaredoxin, and glutathione
Gene Ontology
[IEA]
ipr2go

Genomic context

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Location Chr:2092817..2093428 External
Strand complement
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length612 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length203 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Pcc6301:syc1953_c
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
Ortholog/paralog cluster databases
  • COG syc1953_c External -- Phylogenetic classification of ortholog.
  • MBGD syc:syc1953_c External -- The automated construction of orthologous groups.
  • Gclust *syc1953_c* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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