cyanobase » Nostoc punctiforme ATCC 29133 » genes » Npun_F0840

GeneView: Npun_F0840

GFF3

GeneAnnotation

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ID Npun_F0840
Type protein_coding_gene
Gene symbol
Gene symbolExtracted from literature
Gene product

aldehyde dehydrogenase

Gene productExtracted from literature
Functional category Not in COGs
Gene Ontology
[IEA]
ipr2go
  • Biological Process: cellular aldehyde metabolic process (GO:0006081 External)
  • Biological Process: metabolic process (GO:0008152 External)
  • Biological Process: oxidation reduction (GO:0055114 External)
  • Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030 External)
  • Molecular Function: oxidoreductase activity (GO:0016491 External)

Genomic context

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Location Chr:981418..982800 External
Strand direct
Genomic context

GenomeView External

GenomeView (old) External

Transcript

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Nucleotide sequence
FNA
Length1383 nt
Sequence retrieving

Peptide

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Translated sequence
FAA
Length460 AA.

Protein families, domains and functional sites

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Graphical view by InterProScan External
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PNG
Npun:npun_f0840
Table view by InterProScan External
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TableView
GFF3
Transmembrane regions predicted by SOSUI
Not detected.

Mutants

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Homology search results (Blast2)

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show/hide TableView GFF3

CyanoBase Ortholog table (blast reciprocal best hit pairs)

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show/hide TableView GFF3

Geneset

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Variation

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References

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External links

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Sequence databases
Gene annotation databases
Protein databases
3D structure databases
  • GTop :Npun_F0840 External -- Genomes TO Protein structures and functions.
Ortholog/paralog cluster databases
  • COG Npun_F0840 External -- Phylogenetic classification of ortholog.
  • MBGD npu:Npun_F0840 External -- The automated construction of orthologous groups.
  • Gclust *Npun_F0840* External -- trans-kingdom classification of proteins.
Phenotype database

API

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Permlinks
Homology: Blast hits
Orthologs: Blast hit ortholog pairs
InterProScan matches

CyanoBase

Kazusa DNA Research Institute

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