cyanobase » Prochlorococcus sp. scB241_526B22

Prochlorococcus sp. scB241_526B22

Summary

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Data source name GCA_000634635.1
Full name Prochlorococcus sp. scB241_526B22 External
Taxonomy Lineage Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.

Genome Information

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Chromosomes
Name Size (bp) Genes
JFKP01000269 125,448 0
JFKP01000078 45,729 0
JFKP01000352 41,897 0
JFKP01000218 40,153 0
JFKP01000377 39,666 0
JFKP01000233 26,990 0
JFKP01000310 25,760 0
JFKP01000166 25,482 0
JFKP01000244 24,863 0
JFKP01000091 19,926 0
JFKP01000017 16,074 0
JFKP01000268 15,462 0
JFKP01000019 14,205 0
JFKP01000079 13,795 0
JFKP01000376 12,976 0
JFKP01000351 12,799 0
JFKP01000358 12,265 0
JFKP01000094 10,794 0
JFKP01000027 10,490 0
JFKP01000353 10,189 0
JFKP01000007 9,843 0
JFKP01000236 9,013 0
JFKP01000279 8,998 0
JFKP01000237 8,822 0
JFKP01000243 8,729 0
JFKP01000020 8,407 0
JFKP01000171 8,194 0
JFKP01000104 8,159 0
JFKP01000231 7,909 0
JFKP01000309 7,726 0
JFKP01000003 7,544 0
JFKP01000092 7,379 0
JFKP01000375 4,473 0
JFKP01000103 4,468 0
JFKP01000350 4,450 0
JFKP01000398 4,441 0
JFKP01000009 4,329 0
JFKP01000371 4,197 0
JFKP01000472 4,022 0
JFKP01000429 3,764 0
JFKP01000093 3,552 0
JFKP01000018 3,429 0
JFKP01000230 3,057 0
JFKP01000355 2,843 0
JFKP01000148 2,817 0
JFKP01000024 2,679 0
JFKP01000442 2,674 0
JFKP01000267 2,671 0
JFKP01000349 2,577 0
JFKP01000220 2,535 0
JFKP01000405 2,320 0
JFKP01000439 2,300 0
JFKP01000029 2,289 0
JFKP01000102 2,284 0
JFKP01000170 2,268 0
JFKP01000025 2,170 0
JFKP01000359 2,140 0
JFKP01000357 2,092 0
JFKP01000235 2,058 0
JFKP01000004 2,030 0
JFKP01000418 2,005 0
JFKP01000406 1,917 0
JFKP01000023 1,842 0
JFKP01000311 1,804 0
JFKP01000097 1,686 0
JFKP01000165 1,677 0
JFKP01000095 1,645 0
JFKP01000402 1,591 0
JFKP01000132 1,583 0
JFKP01000432 1,582 0
JFKP01000010 1,522 0
JFKP01000153 1,496 0
JFKP01000232 1,377 0
JFKP01000168 1,367 0
JFKP01000120 1,360 0
JFKP01000154 1,351 0
JFKP01000410 1,348 0
JFKP01000021 1,341 0
JFKP01000016 1,332 0
JFKP01000473 1,317 0
JFKP01000356 1,309 0
JFKP01000167 1,299 0
JFKP01000384 1,295 0
JFKP01000372 1,286 0
JFKP01000077 1,279 0
JFKP01000485 1,194 0
JFKP01000409 1,194 0
JFKP01000006 1,183 0
JFKP01000452 1,169 0
JFKP01000184 1,142 0
JFKP01000011 1,141 0
JFKP01000471 1,125 0
JFKP01000314 1,117 0
JFKP01000370 1,116 0
JFKP01000369 1,111 0
JFKP01000098 1,103 0
JFKP01000431 1,095 0
JFKP01000383 1,053 0
JFKP01000125 1,048 0
JFKP01000430 1,037 0
JFKP01000015 1,033 0
JFKP01000169 1,031 0
JFKP01000143 1,026 0
JFKP01000005 1,021 0
JFKP01000026 1,015 0
JFKP01000066 1,012 0
JFKP01000070 1,011 0
JFKP01000348 1,010 0
JFKP01000407 1,007 0
JFKP01000403 989 0
JFKP01000399 987 0
JFKP01000388 984 0
JFKP01000426 982 0
JFKP01000270 939 0
JFKP01000028 938 0
JFKP01000345 926 0
JFKP01000312 863 0
JFKP01000491 855 0
JFKP01000428 852 0
JFKP01000425 851 0
JFKP01000219 846 0
JFKP01000374 844 0
JFKP01000367 826 0
JFKP01000387 810 0
JFKP01000291 793 0
JFKP01000149 773 0
JFKP01000474 761 0
JFKP01000201 752 0
JFKP01000139 715 0
JFKP01000096 710 0
JFKP01000373 708 0
JFKP01000245 696 0
JFKP01000241 686 0
JFKP01000380 686 0
JFKP01000033 682 0
JFKP01000112 681 0
JFKP01000288 676 0
JFKP01000134 667 0
JFKP01000434 666 0
JFKP01000151 661 0
JFKP01000492 652 0
JFKP01000389 648 0
JFKP01000477 646 0
JFKP01000264 643 0
JFKP01000271 639 0
JFKP01000058 637 0
JFKP01000436 635 0
JFKP01000378 632 0
JFKP01000216 622 0
JFKP01000002 622 0
JFKP01000039 613 0
JFKP01000250 612 0
JFKP01000147 611 0
JFKP01000067 610 0
JFKP01000238 603 0
JFKP01000036 596 0
JFKP01000146 588 0
JFKP01000057 588 0
JFKP01000127 588 0
JFKP01000417 584 0
JFKP01000266 583 0
JFKP01000159 570 0
JFKP01000042 569 0
JFKP01000155 567 0
JFKP01000479 567 0
JFKP01000075 566 0
JFKP01000133 560 0
JFKP01000391 559 0
JFKP01000318 555 0
JFKP01000062 554 0
JFKP01000061 553 0
JFKP01000142 550 0
JFKP01000099 541 0
JFKP01000290 528 0
JFKP01000150 527 0
JFKP01000082 526 0
JFKP01000424 524 0
JFKP01000254 523 0
JFKP01000012 514 0
JFKP01000202 511 0
JFKP01000188 507 0
JFKP01000050 507 0
JFKP01000176 502 0
JFKP01000443 492 0
JFKP01000478 491 0
JFKP01000040 490 0
JFKP01000008 482 0
JFKP01000446 476 0
JFKP01000421 474 0
JFKP01000368 467 0
JFKP01000379 462 0
JFKP01000416 461 0
JFKP01000032 458 0
JFKP01000158 458 0
JFKP01000362 456 0
JFKP01000131 450 0
JFKP01000076 448 0
JFKP01000382 446 0
JFKP01000117 441 0
JFKP01000229 439 0
JFKP01000284 436 0
JFKP01000412 432 0
JFKP01000144 429 0
JFKP01000122 429 0
JFKP01000088 426 0
JFKP01000074 425 0
JFKP01000411 425 0
JFKP01000427 423 0
JFKP01000321 421 0
JFKP01000190 417 0
JFKP01000069 415 0
JFKP01000460 414 0
JFKP01000105 410 0
JFKP01000494 409 0
JFKP01000189 408 0
JFKP01000037 407 0
JFKP01000051 406 0
JFKP01000301 405 0
JFKP01000435 400 0
JFKP01000457 399 0
JFKP01000441 399 0
JFKP01000493 398 0
JFKP01000320 396 0
JFKP01000140 396 0
JFKP01000152 396 0
JFKP01000137 395 0
JFKP01000333 393 0
JFKP01000084 393 0
JFKP01000199 392 0
JFKP01000129 392 0
JFKP01000141 391 0
JFKP01000126 389 0
JFKP01000203 389 0
JFKP01000498 387 0
JFKP01000366 384 0
JFKP01000476 383 0
JFKP01000364 382 0
JFKP01000341 380 0
JFKP01000275 380 0
JFKP01000259 379 0
JFKP01000183 374 0
JFKP01000056 373 0
JFKP01000385 367 0
JFKP01000483 366 0
JFKP01000205 365 0
JFKP01000173 363 0
JFKP01000121 362 0
JFKP01000394 362 0
JFKP01000247 361 0
JFKP01000207 358 0
JFKP01000161 357 0
JFKP01000296 356 0
JFKP01000489 355 0
JFKP01000360 353 0
JFKP01000228 351 0
JFKP01000437 350 0
JFKP01000090 348 0
JFKP01000450 347 0
JFKP01000256 347 0
JFKP01000475 343 0
JFKP01000325 343 0
JFKP01000035 340 0
JFKP01000344 340 0
JFKP01000182 337 0
JFKP01000180 333 0
JFKP01000447 332 0
JFKP01000136 326 0
JFKP01000255 325 0
JFKP01000175 325 0
JFKP01000128 325 0
JFKP01000326 325 0
JFKP01000300 324 0
JFKP01000404 323 0
JFKP01000386 322 0
JFKP01000336 322 0
JFKP01000181 321 0
JFKP01000263 320 0
JFKP01000111 320 0
JFKP01000307 318 0
JFKP01000445 317 0
JFKP01000305 315 0
JFKP01000277 315 0
JFKP01000226 315 0
JFKP01000276 313 0
JFKP01000196 312 0
JFKP01000089 312 0
JFKP01000393 309 0
JFKP01000283 309 0
JFKP01000422 309 0
JFKP01000198 308 0
JFKP01000138 307 0
JFKP01000034 306 0
JFKP01000197 305 0
JFKP01000363 305 0
JFKP01000055 305 0
JFKP01000313 305 0
JFKP01000187 304 0
JFKP01000043 303 0
JFKP01000234 303 0
JFKP01000044 302 0
JFKP01000289 299 0
JFKP01000101 296 0
JFKP01000209 296 0
JFKP01000392 295 0
JFKP01000123 294 0
JFKP01000496 294 0
JFKP01000285 294 0
JFKP01000401 293 0
JFKP01000486 293 0
JFKP01000281 292 0
JFKP01000308 292 0
JFKP01000191 291 0
JFKP01000265 290 0
JFKP01000052 288 0
JFKP01000317 288 0
JFKP01000130 287 0
JFKP01000177 287 0
JFKP01000490 286 0
JFKP01000118 285 0
JFKP01000361 283 0
JFKP01000484 282 0
JFKP01000455 280 0
JFKP01000030 278 0
JFKP01000497 276 0
JFKP01000334 276 0
JFKP01000495 276 0
JFKP01000420 276 0
JFKP01000135 272 0
JFKP01000116 271 0
JFKP01000274 271 0
JFKP01000060 270 0
JFKP01000156 270 0
JFKP01000316 270 0
JFKP01000119 269 0
JFKP01000107 268 0
JFKP01000466 268 0
JFKP01000041 268 0
JFKP01000323 268 0
JFKP01000481 267 0
JFKP01000438 267 0
JFKP01000014 267 0
JFKP01000163 266 0
JFKP01000059 265 0
JFKP01000330 264 0
JFKP01000194 264 0
JFKP01000071 263 0
JFKP01000108 263 0
JFKP01000342 262 0
JFKP01000215 262 0
JFKP01000324 261 0
JFKP01000459 260 0
JFKP01000292 260 0
JFKP01000145 258 0
JFKP01000193 258 0
JFKP01000031 257 0
JFKP01000467 257 0
JFKP01000488 256 0
JFKP01000400 256 0
JFKP01000487 256 0
JFKP01000413 255 0
JFKP01000045 255 0
JFKP01000172 255 0
JFKP01000453 254 0
JFKP01000064 254 0
JFKP01000329 252 0
JFKP01000282 252 0
JFKP01000335 250 0
JFKP01000038 250 0
JFKP01000213 249 0
JFKP01000319 249 0
JFKP01000414 249 0
JFKP01000212 248 0
JFKP01000185 245 0
JFKP01000315 244 0
JFKP01000221 243 0
JFKP01000022 243 0
JFKP01000224 243 0
JFKP01000072 242 0
JFKP01000258 242 0
JFKP01000211 241 0
JFKP01000272 240 0
JFKP01000086 240 0
JFKP01000408 238 0
JFKP01000081 237 0
JFKP01000463 237 0
JFKP01000347 236 0
JFKP01000456 236 0
JFKP01000223 236 0
JFKP01000397 234 0
JFKP01000239 233 0
JFKP01000210 233 0
JFKP01000261 232 0
JFKP01000253 232 0
JFKP01000260 232 0
JFKP01000174 232 0
JFKP01000286 231 0
JFKP01000192 230 0
JFKP01000381 230 0
JFKP01000343 230 0
JFKP01000337 230 0
JFKP01000124 229 0
JFKP01000046 228 0
JFKP01000085 228 0
JFKP01000195 228 0
JFKP01000204 228 0
JFKP01000068 227 0
JFKP01000080 226 0
JFKP01000482 226 0
JFKP01000448 226 0
JFKP01000242 226 0
JFKP01000115 225 0
JFKP01000449 224 0
JFKP01000083 224 0
JFKP01000001 223 0
JFKP01000415 223 0
JFKP01000240 223 0
JFKP01000462 223 0
JFKP01000278 222 0
JFKP01000423 222 0
JFKP01000178 221 0
JFKP01000327 221 0
JFKP01000206 221 0
JFKP01000200 221 0
JFKP01000297 220 0
JFKP01000217 220 0
JFKP01000458 220 0
JFKP01000340 219 0
JFKP01000468 219 0
JFKP01000179 219 0
JFKP01000346 219 0
JFKP01000257 219 0
JFKP01000306 218 0
JFKP01000273 218 0
JFKP01000332 218 0
JFKP01000251 218 0
JFKP01000440 218 0
JFKP01000063 217 0
JFKP01000302 217 0
JFKP01000249 217 0
JFKP01000047 217 0
JFKP01000054 216 0
JFKP01000454 216 0
JFKP01000298 216 0
JFKP01000100 216 0
JFKP01000294 215 0
JFKP01000222 215 0
JFKP01000227 215 0
JFKP01000065 214 0
JFKP01000162 213 0
JFKP01000419 213 0
JFKP01000164 213 0
JFKP01000214 213 0
JFKP01000248 213 0
JFKP01000073 213 0
JFKP01000246 213 0
JFKP01000304 213 0
JFKP01000252 211 0
JFKP01000461 211 0
JFKP01000390 210 0
JFKP01000280 210 0
JFKP01000299 209 0
JFKP01000049 209 0
JFKP01000339 209 0
JFKP01000464 208 0
JFKP01000106 208 0
JFKP01000287 208 0
JFKP01000338 208 0
JFKP01000160 207 0
JFKP01000013 207 0
JFKP01000444 206 0
JFKP01000395 205 0
JFKP01000087 205 0
JFKP01000365 205 0
JFKP01000048 205 0
JFKP01000328 205 0
JFKP01000208 205 0
JFKP01000109 205 0
JFKP01000295 205 0
JFKP01000113 204 0
JFKP01000480 203 0
JFKP01000114 203 0
JFKP01000225 203 0
JFKP01000465 203 0
JFKP01000396 202 0
JFKP01000469 202 0
JFKP01000293 202 0
JFKP01000303 202 0
JFKP01000157 201 0
JFKP01000053 201 0
JFKP01000470 201 0
JFKP01000331 201 0
JFKP01000433 201 0
JFKP01000354 200 0
JFKP01000451 200 0
JFKP01000110 200 0
JFKP01000186 200 0
JFKP01000262 200 0
JFKP01000322 135 0
Total 934,681 0
Features FeaturesView : 0 features

Genes

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List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

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BLAST2
KazusaMart Dataset GCA_000634635.1

Genome-scale data

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Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

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References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

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Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

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Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000634635.1/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000634635.1/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000634635.1/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000634635.1/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000634635.1/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000634635.1/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000634635.1/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000634635.1/genes/interpro.txt (File format)

Kazusa DNA Research Institute

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