##	1
+	2
1	40
10	2
12	1
13	2
15	1
16	1
16S	1
2	52
2'	1
203	1
23S	1
2C	1
2Fe	4
2S	4
3	47
3'	3
3.A.1.11.1	1
3.A.1.4.1	4
3.A.1.5.1	3
3.A.1.7.1	4
3.A.1.8.1	3
3.A.5.1.1	7
30S	1
33	1
34	1
3b	1
3R	1
4	33
4'	1
40	1
4Fe	3
4L	1
4S	3
5	28
5'	10
50S	2
54	1
57	1
5S	1
6	28
60	3
6x	1
6y	2
7	10
70	1
73	1
74546.3.peg.720	1
8	11
8x	1
9	1
=	1
=alpha	1
@	3
A	30
a	5
A37	1
AAA+	2
aapQ	1
ABC	53
Abortive	1
AbrB	2
accepting	2
acceptor	1
Acetolactate	2
acetyl	4
Acetyl	3
acetylenolpyruvoylglucosamine	1
acetylglucosamine	7
acetylglucosaminyl	1
Acetylglutamate	1
acetylmuramate	1
acetylmuramoyl	5
acetylmuramoylalanine	1
acetylmuramoylalanyl	2
acetylmuramyl	1
Acetylornithine	2
acetyltransferase	10
acetyltransferases	2
acid	30
Aconitate	1
ACP	1
activating	1
activity	2
Acyl	2
acyl	13
acyltransferase	8
adaptor	2
adding	2
Additional	1
adenine	1
Adenine	1
Adenosine	1
adenosine	1
Adenosylcobinamide	2
Adenosylhomocysteinase	1
adenosylmethionine	3
adenosyltransferase	1
Adenylate	1
Adenylosuccinate	2
adenylyltransferase	5
ADP	2
aerobic	4
affinity	5
affnity	3
Agmatine	1
Ala	3
alamin	1
alanine	13
Alanine	2
alanyl	4
Alanyl	1
Aldehyde	1
Aldo	3
aldolase	4
Aldose	1
Alkaline	1
Alkyl	4
All3116	1
Allophycocyanin	4
allosteric	1
Alpha	2
alpha	37
alphaproteobacterial	1
alr1037	1
alr2840	1
alternative	1
Aluminum	1
Amidase	1
amidase	5
amidohydrolase	1
Amidophosphoribosyltransferase	1
amidotransferase	8
amidotransferases	1
Amino	2
amino	20
aminoimidazole	1
Aminomethyltransferase	1
aminopeptidase	6
aminotransferase	13
ammonia	1
AMP	1
AmpG	1
amylomaltase	2
an	3
anaerobic	3
analog	1
and	40
anhydrase	1
antagonist	3
Anthranilate	1
anthranilate	1
anti	3
Anti	1
antigen	2
antiporter	2
antitermination	1
apocytochrome	1
Apolipoprotein	1
apoprotein	2
arabino	1
arabinose	1
Arc6	1
archaeal	1
Arg	4
arginine	3
Argininosuccinate	2
Arginyl	1
Arogenate	1
Arsenical	2
as	2
Asn	4
Asp	1
Asp88	1
Asparaginase	1
asparaginase	2
asparaginyl	1
Asparaginyl	1
aspartate	2
Aspartate	5
Aspartokinase	1
Aspartyl	5
assembly	19
associated	17
association	1
At3g61080	1
ATP	53
ATPase	22
ATPases	2
attenuator	2
auxin	1
B	9
b	2
B'	1
B.	2
B12	2
b559	2
b6	6
bacteria	2
bacterial	2
Bacterial	1
bacteriocin	1
barrel	1
BchP	1
benzoquinone	2
beta	28
Beta	8
beta''	1
betaine	1
Bilin	6
binding	80
biogenesis	5
Biopolymer	1
biopolymer	1
Biosynthesis	2
biosynthesis	19
biosynthetic	1
Biosynthetic	1
Biotin	4
biotin	1
BioY	1
BipA	1
bisphosphatase	2
bisphosphate	4
bisphosphoglycerate	1
bound	1
box	1
branched	1
Branched	4
branching	2
BS	2
BtpA	1
butanone	1
butenyl	1
C	14
c	10
C11	1
C15	1
C17	1
C20	1
C5	1
c550	1
c553	1
CAB	2
cadmium	2
Calcium	2
Calvin	1
capsid	1
capsular	1
Carbamoyl	2
carbamoylputrescine	1
carbamoyltransferase	2
carbinolamine	1
Carbohydrate	2
carbon	6
Carbon	2
Carbonic	1
carboxamide	1
carboxyl	5
carboxylase	8
carboxylate	1
carboxylesterase	1
carboxylic	1
carboxymethylaminomethyl	1
carboxypeptidase	3
Carboxysome	3
carboxyvinyltransferase	1
carotene	3
Carotenoid	2
carrier	13
caspase	1
catalytic	3
catechol	1
Cation	1
CbiG	1
CbpA	2
CBS	2
CBSS	1
CC	1
CcdA	1
CcmK	3
CcmL	1
CcmM	1
CcmN	1
CcmO	1
Ccs1	1
CcsA	1
CDP	1
Cell	20
cell	3
Cellulase	1
center	1
chain	58
channel	2
chaperon	1
Chaperone	6
chaperone	13
chaperonin	2
Chase2	1
checkpoint	1
chelatase	5
chemotaxis	2
CheY	1
ChlG	1
ChlL	1
Chlorophyll	1
chlorophyll	2
chloroplast	3
choline	1
Chorismate	2
Chromosomal	1
chromosomal	1
Chromosome	5
chromosome	1
CinA	1
Circadian	6
cis	4
Citrate	1
class	12
clcC	2
cleavage	3
Cleavage	1
Clock	1
clock	2
clone	1
Clp	9
ClpB	2
ClpC	2
ClpS	2
ClpX	1
cluster	11
clustered	2
Cm32	1
CMP	1
co	2
CO2	5
CoA	9
CoaX	1
Cob	1
Cobalamin	2
Cobalt	9
cobalt	2
cobaltochelatase	2
CobN	1
CobW	1
cobyric	1
Cobyric	2
Cobyrinic	1
Coenzyme	1
coenzyme	3
cofactor	4
COG	1
COG0028	1
COG0178	1
COG0346	1
COG0438	2
COG0488	1
COG0523	1
COG0536	1
COG0542	1
COG0546	1
COG0576	1
COG0748	1
COG0779	1
COG1089	1
COG1357	1
COG1426	1
COG1496	1
COG1565	2
COG1720	1
COG1801	1
COG1836	1
COG1939	1
COG2740	1
COG3146	1
COG3236	1
COG3321	1
COG5420	1
COGs	1
coil	1
coiled	1
Cold	1
coli	1
competence	3
Competence	1
complex	14
complexity	1
component	45
components	1
concentrating	5
condensation	1
conductance	1
connection	1
conserved	10
Conserved	2
contain	1
containing	7
contains	5
control	1
controller	1
controlling	1
CopG	1
Coproporphyrinogen	2
coproporphyrinogen	2
COQ5	1
core	6
coupling	1
Cox15	1
CP12	2
CP43	1
CP47	1
CpeR	1
CpeS	4
CpeT	2
CpeY	4
CpeZ	1
CphX	2
CpsA	2
Crossover	1
CRP	1
CruA	1
CruP	1
CsaB	1
CtaA	1
CTP	1
Cyano2	1
cyanobacteria	5
Cyanobacteria	4
cyanobacterial	11
Cyanobacterial	2
Cyanophycin	1
Cyanophycinase	1
cyclase	9
cycle	1
cyclic	4
cyclo	3
cyclodiphosphate	1
cyclohexene	1
cyclohydrolase	4
Cys	1
CysA	1
CysP	1
CysT	1
cysteine	2
Cysteine	7
Cysteinyl	1
CysW	1
cyt	1
cytidylyltransferase	3
Cytochrome	17
cytochrome	6
cytoplasm	1
cytosine	1
Cytosol	2
D	30
D1	1
D2	1
damage	1
dCMP	1
DctM	1
DctQ	1
deacetylase	4
DEAD	1
deaminase	5
deazariboflavin	2
debranching	1
decarboxylase	9
decarboxylating	4
DedA	1
deformylase	1
degradation	1
dehalogenase	2
dehydrase	1
dehydratase	11
dehydrogenase	59
dehydroquinate	2
dehydrorhamnose	1
deiminase	1
delta	5
demethylubiquinone	1
deoxy	3
Deoxyribodipyrimidine	1
deoxyribonuclease	1
Deoxyribose	1
Deoxyuridine	1
dependent	34
Dephospho	1
desaturase	7
desulfurase	6
determining	5
Dethiobiotin	1
DevB	2
DevC	1
DevT	1
diacylglycerol	1
Diacylglycerol	1
diacylglyceryl	1
diamide	1
Diaminohydroxyphosphoribosylaminopyrimidine	1
diaminopimelate	3
Diaminopimelate	2
dicarboxylate	2
didemethyl	2
differentiation	7
Diflavin	2
diguanylate	2
dihydro	1
dihydrobiliverdin	1
Dihydrodipicolinate	2
Dihydroflavonol	1
Dihydrofolate	1
dihydrolipoamide	2
Dihydrolipoamide	2
Dihydroneopterin	1
Dihydroorotase	2
Dihydroorotate	1
Dihydropteroate	1
dihydrouridine	1
Dihydroxy	1
dihydroxy	2
dikinase	1
dimethyl	1
Dimethyladenosine	1
dimethylbenzimidazole	1
dioic	1
dioxide	5
dioxygenases	1
diphosphatase	1
diphosphate	7
diphosphocytidyl	1
directed	6
DisA	1
disaccharide	1
dismutase	2
dissimilatory	1
dissociation	1
distribution	1
division	20
DMT	1
DNA	50
dnaA	1
DnaA	2
DnaJ	7
DnaK	3
docking	2
dolichol	1
domain	21
domains	3
double	1
driving	2
drug	1
DsbD	1
dTDP	1
DUF2389	1
DUF490	1
DUF512	1
DUF87	1
DUF901	1
duplicated	1
E	4
E.	1
E1	2
E3	2
ECF	6
effector	1
efflux	2
electron	3
element	1
ELIP	2
elongation	6
endodeoxyribonuclease	1
Endonuclease	1
endonuclease	2
Endoribonuclease	1
ene	1
energizing	3
EngA	2
EngC	1
Enolase	1
enolpyruvyl	1
Enolpyruvylshikimate	1
Enoyl	2
envelope	2
enyl	1
enzyme	10
enzymes	4
epimerase	8
epimerases	2
epithelial	1
epoxide	1
epsilon	1
Era	1
erythritol	3
essential	4
ester	2
ExbB	1
ExbD	1
exchanger	2
exchanging	1
Excinuclease	4
excision	1
ExoD	1
Exodeoxyribonuclease	1
exonuclease	3
Exonuclease	2
exopolysaccharide	1
exoribonuclease	1
Exoribonuclease	2
export	3
exporters	1
expressed	11
extender	1
extracellular	1
extrinsic	1
extrusion	1
f	6
F	1
F15H18.21	1
F420	1
facilitator	3
factor	35
factors	1
families	1
family	59
farnesyltransferase	1
fasciclin	1
fatty	2
Fatty	2
fdxN	1
Fe	4
Fe2+	1
FeMo	4
FenI	1
fermentation	1
ferredoxin	10
Ferredoxin	8
Ferric	4
ferro	2
Ferrochelatase	2
FeS	1
Ffh	1
FGGY	2
FHA	1
fibrillin	1
fibrinogen	1
Fibronectin	1
FIG000233	1
FIG000859	1
FIG001583	1
FIG003307	1
FIG00379104	1
FIG00556584	1
FIG00557289	1
FIG00558009	1
FIG00562464	1
FIG00566093	1
FIG00569392	1
FIG00684905	1
FIG00811765	1
FIG00813825	1
FIG00870270	1
FIG00870295	1
FIG00870304	1
FIG00870733	1
FIG00870803	1
FIG00870833	1
FIG00870918	1
FIG00870930	1
FIG00871351	1
FIG00871379	1
FIG00871789	1
FIG00871844	1
FIG00871899	1
FIG00872386	1
FIG00872625	1
FIG00873008	1
FIG00873014	1
FIG00874454	1
FIG00874514	1
FIG00874660	1
FIG00874885	1
FIG00876085	1
FIG00876235	1
FIG00876342	1
FIG00876581	1
FIG00876916	1
FIG00877330	1
FIG00877420	1
FIG011178	1
FIG017608	2
FIG020308	1
FIG023675	1
FIG038648	1
FIG052964	1
FIG068338	1
FIG092679	2
FIG137771	2
filament	2
final	1
fixation	3
FKBP	1
Flagellar	1
Flavin	1
Flavodoxin	1
flavoprotein	3
FliK	1
flippase	1
flow	3
FMN	2
FOG	4
Folate	2
fold	3
for	16
form	2
Formamidopyrimidine	1
formation	2
formylation	1
formyltetrahydrofolate	1
formyltransferase	2
found	1
FraG	1
fraH	1
frameshift	1
from	3
Fructokinase	1
Fructosamine	1
Fructose	3
fructose	2
Ftn2	1
FtsH	5
FtsI	3
FtsJ	1
FtsQ	1
FtsW	1
FtsX	1
FtsY	1
FtsZ	1
Fumarate	1
function	5
functioning	1
FUR	1
fusion	3
G	3
galactosephosphotransferase	1
galactoside	1
Gamma	4
gamma	4
GAPDH	1
GCN5	3
GDP	3
General	2
genetic	2
Geranylgeranyl	2
Gfo	1
GGDEF	2
GH	2
GH3	1
gid	1
GidA	1
GidB	1
GlcNAc	1
Gln	1
Global	1
GlpX	1
Glu	1
glucan	1
glucanotransferase	2
Glucokinase	1
glucosamine	3
Glucosamine	2
glucose	6
Glucose	5
glucosyltransferase	1
Glutamate	4
glutamate	4
glutamine	2
Glutamine	2
glutamyl	4
Glutamyl	2
glutaredoxin	3
Glutathione	4
Gly	2
glyceraldehyde	1
Glycerol	3
glycerol	7
Glycine	3
glycine	5
Glycogen	4
glycogen	1
glycolipid	2
glycosyl	2
Glycosyl	1
glycosylase	2
glycosyltransferase	1
Glycosyltransferase	12
Glycyl	2
glyoxylate	1
GMP	2
GNAT	1
GntR	1
GroEL	2
GroES	1
Group	3
group	2
growth	1
GrpE	2
GTP	12
GTPase	6
guanine	2
Guanine37	1
Guanylate	1
guanylyltransferase	5
gyrase	3
H	16
H+	3
HAD	1
Haloacid	1
haloalkane	1
HAS	1
Hat	3
HatR	3
have	1
HCF101	1
HCF136	1
HD	1
heat	2
Heat	5
HEAT	2
heavy	1
Helicase	3
helicase	12
helicases	1
Helix	1
helix	2
Heme	5
heme	1
HemN	2
Hemolysins	2
heptose	1
heptosyltransferase	1
heptulosonate	1
hesA	1
HesB_IscA_SufA	3
Heterocyst	1
heterocyst	14
HetP	1
HetR	1
hexosaminidase	1
HflX	1
HI	1
High	5
HII	1
His	1
histidine	8
Histidine	3
Histidinol	3
Histidyl	1
Histone	2
HIT	1
HLIP	2
HlyD	2
HNH	1
Holliday	3
homeostasis	1
Homocitrate	1
homocysteine	1
Homolog	1
homolog	30
homologs	1
Homoserine	3
hook	1
HPA2	2
HrcA	1
HtpG	1
HtrA	1
HU	1
hybrid	3
hydratase	4
hydration	2
hydrogen	1
Hydrogenase	1
hydrogenase	10
Hydrolase	1
hydrolase	15
hydrolases	1
hydrolyzing	1
hydroperoxide	4
Hydroxy	1
hydroxy	7
Hydroxyacylglutathione	1
hydroxybenzoate	2
hydroxylase	4
hydroxymethyldihydropteridinepyrophosphokinase	1
hydroxymethyltransferase	2
hydroxymyristoyl	5
hydroxythreonine	2
HypA	1
HypB	1
HypC	1
HypD	1
HypE	1
HypF	1
Hypothetical	15
hypothetical	768
I	38
i	1
Ia	3
Ib	1
Idh	1
II	37
III	27
IIIA	1
Ile	2
Imidazole	2
Imidazoleglycerol	1
iminopeptidase	1
IMP	2
implicated	1
import	1
in	27
Inactive	1
incorporation	2
independent	10
Indole	1
induced	2
inducible	3
infection	1
inhibited	1
inhibitor	2
inhibitory	1
initiation	5
initiator	1
Inner	1
inner	1
Inorganic	1
inorganic	1
Inosine	1
inosine	1
Inositol	1
input	1
insertion	1
Insulinase	1
integral	2
integrase	2
integrity	2
intein	1
interface	1
invertase	1
Involved	6
involved	8
involvement	1
io	1
Iojap	1
ion	2
iron	18
Iron	9
isochorismate	1
Isochorismate	1
Isocitrate	1
Isoleucyl	1
isomerase	14
isomerizing	2
isopentenylpyrophosphate	1
isopropylmalate	4
IV	4
IX	8
J	2
junction	4
K	1
Kae1	1
KaiA	1
KaiB	1
KaiC	1
KASII	1
KASIII	1
kDa	5
keto	5
ketoacyl	1
ketobutyrate	1
Ketol	1
kinase	46
Kinase	2
KtrA	1
KtrB	1
L	16
L10Ae	1
L10e	1
L10p	1
L11	2
L11e	1
L11p	1
L12	1
L12e	1
L13Ae	1
L13p	1
L14p	1
L15p	1
L16p	1
L17e	1
L17p	1
L18p	1
L19p	1
L1e	1
L1p	1
L20p	1
L21p	1
L22p	1
L23Ae	1
L23e	1
L23p	1
L24p	1
L25p	1
L26e	1
L27Ae	1
L27p	1
L28p	1
L29p	1
L2p	1
L31p	1
L32p	1
L35e	1
L35p	1
L36p	1
L3e	1
L3p	1
L4p	1
L5e	1
L5p	1
L6p	1
L7	1
L8e	1
L9e	1
L9p	1
lactamase	3
lactate	1
Lactoylglutathione	2
lantibiotic	1
large	8
Large	1
LdpA	1
Lead	1
length	1
LepA	1
Leu	4
Leucyl	2
LexA	1
ligase	18
Light	5
light	1
like	34
linker	12
Lipid	1
lipid	2
Lipoate	3
lipolytic	1
lipooligosaccharide	1
Lipopolysaccharide	1
lipoprotein	1
Lipoprotein	1
LivF	1
LivG	1
LivH	1
LivM	1
Lon	1
Long	1
loop	1
Low	3
low	2
LPS	1
LSU	31
lsuRNA	1
lyase	10
lyases	1
Lycopene	2
Lys	1
lysidine	1
Lysine	1
Lysyl	1
lytic	2
LytR	2
M	3
m	1
M16	1
M48	1
m7G46	1
Maf	1
Magnesium	1
Main	1
major	3
malic	1
Malonyl	1
Malto	2
maltose	1
manganese	1
Manganese	5
mannosaminuronic	1
mannose	1
Mannose	5
mannosyltransferase	1
maturation	6
mecB	2
mechanism	5
mechanosensitive	1
MecI	1
mediated	1
Membrane	6
membrane	31
menaquinone	2
Mercuric	1
mercury	1
Met	2
metabolising	1
metabolite	1
metal	3
metallocenter	4
metalloprotease	3
Methionine	2
methionine	2
Methionyl	2
methyl	8
Methyl	2
methylaminomethyl	1
Methylase	1
methylase	3
methylbut	1
methylenetetrahydrofolate	1
Methylenetetrahydrofolate	1
methylmutase	1
methyltetrahydrofolate	1
methylthioadenosine	1
Methylthioribose	1
methylthiotransferase	2
methyltransferase	35
methyltransferases	1
Mg	7
MinC	1
MinD	1
MinE	1
mismatch	2
Mitochondrial	1
moaA	2
MoaD	1
MocA	1
ModA	1
ModB	1
ModC	1
modification	1
modifier	1
modulation	1
modulator	1
module	3
modules	1
molecular	5
Molecular	1
Molybdenum	3
molybdenum	4
monomethyl	2
monooxygenase	4
monophosphatase	1
monophosphate	2
monothiol	1
MpeU	1
MreB	1
MreC	1
MRP	1
ms	1
MsrA	1
MsrB	1
MTase	1
Mucin	1
Multi	1
multidrug	3
Multimodular	2
murein	2
MurJ	1
mutase	4
Mutator	1
mutator	1
MutL	1
MutS	1
MutS2	1
mutT	1
MutT	1
Myosin	1
N	40
N1	1
Na+	5
NAD	18
NADH	14
NADP	3
NADP+	1
NADPH	2
Naphthoate	1
naphthoate	1
NblA	1
NblB	3
NdhL	1
Negative	2
Neurosporene	1
Nickel	1
nickel	6
nicotinamide	1
Nicotinate	2
NifB	1
nifB	2
NiFe	6
NifE	1
NifH	1
NifN	1
NifO	1
NifT	1
NifU	2
NifW	1
NifX	2
NifZ	1
NikM	1
NikN	1
NikO	1
NikQ	1
nitrilase	1
nitrogen	1
Nitrogen	2
Nitrogenase	9
NnrU	1
NnuR	1
NrrA	1
NTPase	1
nucleic	2
nucleoids	1
Nucleoside	3
nucleotidase	2
nucleotide	6
nucleotidohydrolase	1
nucleotidyltransferase	3
nudix	1
NusA	2
NusB	1
NusG	1
nutrient	1
O	13
Obg	1
Octanoate	1
octanoyltransferase	1
Octaprenyl	1
octaprenyltranferase	1
octaprenyltransferase	1
of	64
Oligoketide	1
Oligopeptide	4
oligopeptide	1
oligosyltrehalose	2
OMA87	1
omega	3
OpcA	1
operon	2
OppA	1
oppB	1
OppC	1
OppD	1
or	1
ORF_ID	1
organic	1
oriC	2
Ornithine	1
Orotate	1
Orotidine	1
ortholog	2
oscillation	1
Outer	2
outer	1
OxaI	1
oxidase	14
oxidative	3
oxidoreductase	17
Oxidoreductase	1
oxidoreductases	1
oxoacyl	3
oxobutanoate	1
oxoglutarate	3
oxoguanine	1
oxohepta	1
oxononanoate	3
oxopropionate	1
oxygen	3
oxygenase	5
P	17
P0	1
P1	1
P2	1
P450	1
P700	2
PAC	2
Pantoate	1
Pantothenate	1
ParA	2
paralog	5
ParB	1
part	4
particle	2
partition	3
partitioning	2
Parvulin	1
PAS	2
pathogenesis	1
pathway	3
PatU	1
Pb2+	1
PcrA	2
PcyA	1
PebA	1
PebB	1
penicillin	1
pentapeptide	3
Pentapeptide	6
pentenoate	1
PepA	2
peptidase	6
Peptidase	2
Peptide	6
Peptidoglycan	2
peptidoglycan	1
Peptidyl	3
peptidyl	2
period	2
Periplasmic	2
periplasmic	8
Permease	3
permease	34
Permeases	3
PetC1	1
PetD	1
PetG	1
Pex	1
PglI	1
PH	1
Phage	4
phase	1
Phe	1
Phenazine	1
phenylalanyl	1
Phenylalanyl	2
Pheophorbide	1
PhoB	1
PhoH	1
PhoR	1
phosphatase	11
phosphatases	1
phosphate	60
Phosphate	9
Phosphatidate	1
phosphatidylcholine	1
phosphatidyltransferase	1
Phospho	1
Phosphoadenylyl	1
phosphodiesterase	1
phosphoenolpyruvate	1
Phosphoglucomutase	1
phosphoglucomutase	2
phosphogluconate	1
phosphogluconolactonase	1
Phosphoglucosamine	1
phosphoglycerate	3
Phosphoglycerate	2
Phospholipase	1
Phospholipid	1
phosphomannomutase	1
Phosphopantetheine	1
phosphopantetheinyl	1
Phosphopantothenoylcysteine	1
phosphoprotein	1
phosphoribosyl	1
Phosphoribosyl	1
Phosphoribosylamine	1
phosphoribosylamino	2
Phosphoribosylaminoimidazole	3
Phosphoribosylformimino	1
Phosphoribosylformylglycinamidine	5
Phosphoribosylglycinamide	1
phosphoribosyltransferase	9
Phosphoribulokinase	1
phosphorylase	2
Phosphoserine	2
phosphosulfolactate	1
photolyase	1
photomixotrophic	1
photosystem	18
Photosystem	18
Phycobilisome	8
phycocyanin	2
Phycocyanin	5
phycocyanobilin	3
Phycocyanobilin	2
phycoerythrin	4
Phycoerythrin	7
Phycoerythrobilin	1
Phytoene	2
phytol	1
phytyl	1
PhzF	1
pigment	1
PilB	1
Pili	1
pilT	1
pilus	1
plant	2
plasmid	1
plastocyanin	1
Plastocyanin	1
PlsX	1
PlsY	1
PmbA	3
PmgA	1
PMID19099556	2
polyadenylation	1
polyketide	1
Polyketide	1
polymerase	18
polypeptide	13
polyprenyltransferase	1
Polyribonucleotide	1
Polysaccharide	2
polysaccharide	1
porin	2
Porphobilinogen	2
Possible	10
possible	4
Potassium	6
PotD	1
PP	1
pqqE	2
precorrin	8
precursor	9
predicted	2
Predicted	4
Prephenate	1
Preprotein	2
preQ0	1
PriA	2
primase	2
prime	1
PRK	1
pro	1
Pro	6
probable	7
Probable	4
processing	4
producing	2
proenzyme	1
programmed	1
prohibitin	2
proline	1
Proline	1
Prolipoprotein	1
prolycopene	1
Prolyl	1
prolyl	4
proper	1
proposed	5
Proposed	1
PROSC	1
PROTEASE	2
Protease	3
protease	21
proteases	1
protection	1
protective	2
protein	1268
Protein	11
proteinase	3
proteins	7
proteobacterial	2
proteolytic	8
protochlorophyllide	4
protoheme	3
proton	2
Protoporphyrin	4
protoporphyrin	3
PsaA	1
PsaB	1
PsaC	1
PsaD	1
PsaE	1
PsaF	1
PsaJ	1
PsaK	1
PsaK1	1
PsaL	1
Psb27	1
Psb28	1
PsbA	1
PsbB	1
PsbC	1
PsbD	1
PsbE	1
PsbF	1
PsbH	1
PsbI	1
PsbJ	1
PsbK	1
PsbL	1
PsbM	1
PsbN	1
PsbO	1
PsbU	1
PsbV	1
PsbW	1
PsbX	1
PsbZ	1
pseudouridine	4
PSP	1
Psr	2
PSRP	1
PstA	1
PstB	1
PstC	1
PstS	1
Pterin	2
PulE	1
pump	2
PurS	1
putative	20
Putative	20
putrescine	1
PxcA	2
Pyridoxamine	1
Pyridoxine	1
pyrophosphatase	2
pyrophosphate	2
pyrophosphokinase	2
pyrophosphoryl	1
pyrophosphorylase	1
Pyrroline	1
pyruvate	3
Pyruvate	7
pyruvoyl	1
Qri7	1
QueC	1
QueE	1
Queuosine	2
Quinolinate	1
quinone	11
R	1
R3H	1
racemase	2
Rad25	2
RAD54	1
RadA	1
Radical	1
Rare	1
RbcX	1
RbgA	2
RecA	1
Receiver	1
receiver	1
receptor	3
RecF	1
RecG	1
RecJ	3
RecN	1
RecO	1
recognition	2
recombination	2
Recombination	2
RecQ	1
RecR	1
recycling	1
reducing	1
reductase	48
reductoisomerase	2
region	4
regulated	1
regulation	2
regulator	31
Regulator	1
regulators	1
regulatory	7
regulon	2
related	29
release	4
Rep	1
repair	10
repeat	16
repeats	1
replication	4
Replicative	1
repressor	2
required	3
requiring	1
ResB	1
ResC	1
resistance	4
resolvase	2
Resolvase	1
Response	2
response	11
responsive	2
Retinal	1
retraction	1
rhamnosyltransferase	1
rhodanese	1
Rhodanese	1
Rhs	1
ribityllumazine	1
Riboflavin	2
Ribokinase	1
Ribonuclease	10
Ribonucleases	1
Ribonucleotide	3
Ribose	2
Ribosomal	13
ribosomal	56
ribosome	1
Ribosome	4
ribosyltransferase	1
ribotide	1
Ribulose	3
rich	1
Rieske	1
RimM	1
RNA	30
RNase	2
RND	1
Rod	2
rod	3
role	1
RpoD	4
Rrf2	1
rRNA	8
RsbU	2
RsbV	1
rsbW	1
RuBisCO	2
RuBisCo	1
Rubredoxin	1
RuvA	1
RuvB	1
RuvC	1
S	9
S10p	1
S11e	1
S11p	1
S12p	2
S13e	1
S13p	1
S14e	1
S14p	1
S15Ae	1
S15e	1
S15p	1
S16e	1
S16p	1
S17p	1
S18e	1
S18p	2
S19p	1
S20e	1
S20p	1
S21p	2
S23e	1
S29e	1
S2e	1
S2p	1
S3e	1
S3p	1
S4	1
S4p	1
S5e	1
S5p	1
S6p	1
S7p	1
S8p	1
S9e	1
S9p	1
SAe	1
Salicylate	1
SAM	4
SasA	1
SbcC	1
SbcD	1
scaffold	4
Scaffold	1
SDR	1
SecA	1
SecD	1
SecF	1
SecG	1
Secretion	1
secretion	1
secretory	1
secY	1
Segregation	1
segregation	1
Selenide	1
Selenophosphate	1
Selenoprotein	1
selenouridine	1
semialdehyde	3
sensor	14
sensors	1
Sensory	1
Sepiapterin	1
Septum	3
Ser	5
Serine	8
serine	10
Seryl	1
seven	1
sfuC	2
shape	3
Shikimate	2
shock	9
Short	1
short	1
si	1
siderophore	1
SigF	1
sigma	15
signal	2
Signal	5
similar	8
Single	5
Sirohydrochlorin	2
SitA	1
SitB	1
SitD	1
site	2
sll0274	1
sll0553	1
sll1129	1
sll1284	1
slr0575	1
Slr0957	1
slr1506	1
slr1827	1
slr1916	2
slr1917	1
slr1944	1
Small	3
small	16
smc	3
SmpB	1
sn	1
SNF	1
SNF2	1
Sodium	1
Solanesyl	1
solanyl	1
Soluble	1
soluble	4
solute	4
solvents	1
Sorbitol	2
SOS	1
spanning	1
specific	19
specificity	2
spermidine	1
Spermidine	1
SphR	1
SphS	1
splice	1
spoIIAA	1
SpoIID	2
sporulation	2
SRP54	1
ssDNA	1
ssl0353	1
Ssr2843	1
SSU	22
ssuRNA	1
stability	1
stabilizing	2
starvation	1
steps	1
stimulated	1
stimulation	1
stomatin	1
stranded	5
stress	3
SUA5	1
subfamily	3
subgroup	4
substrate	5
Substrate	3
subtilis	2
subunit	116
Subunit	2
subunits	1
succinate	1
Succinate	3
succinocarboxamide	1
succinyl	1
succinylbenzoate	1
succinylbenzoic	1
Sucrose	3
SufB	1
SufC	1
SufD	1
SufE	1
SufR	1
Sugar	1
sugar	7
SUI1	1
sulfate	2
Sulfate	9
sulfite	1
sulfoxide	2
sulfur	15
Sulfur	3
sulfurtransferase	1
superfamily	16
Superfamily	3
superoxide	2
SurE	1
symporter	2
Syn7942_0773	1
synthase	95
synthesis	3
synthetase	35
system	26
systems	1
T	1
t	1
targeted	1
TatA	1
TatC	1
tau	1
TC	22
Tc	1
TerC	1
terminal	7
termination	4
tetrahydrobiopterin	2
Tfp	1
the	12
Thermonuclease	1
Thiamin	2
Thiamine	2
ThiC	1
ThiF	1
ThiO	1
Thioesterase	1
thioredoxin	5
Thioredoxin	2
thiosulfate	2
Thiosulfate	1
thiouridylate	1
ThiS	2
Thr	4
Threonine	3
threonine	11
Threonyl	1
threonylcarbamoyladenosine	1
thylakoid	1
Thymidylate	2
thyX	1
TldD	7
TldE	7
tmRNA	1
to	12
TolR	1
TonB	2
topoisomerase	1
topological	1
TPR	7
trans	5
transacylase	1
Transaldolase	2
transciptional	1
transcribed	1
transcription	3
Transcription	4
Transcriptional	4
transcriptional	10
transcripton	1
transduction	2
Transduction	1
transferase	16
transglucosylase	1
Transglutaminase	1
transglycosylase	5
transhydrogenase	3
Transketolase	1
Translation	10
translocase	3
translocation	2
transmembrane	2
Transmembrane	2
transpeptidase	2
transport	31
Transporter	2
transporter	52
transporters	3
transporting	5
Transposase	2
TRAP	3
trehalohydrolase	1
Trehalose	1
triad	1
trigger	1
Triosephosphate	1
triphosphatase	1
triphosphate	2
TrkA	1
TrmA	1
TrmE	1
TrmH	1
tRNA	90
Trp	1
Tryptophan	2
Tryptophanyl	1
Ts	1
Tu	1
turn	1
Twin	2
Two	4
two	16
TypA	1
type	29
Type	1
Tyr	1
Tyrosine	1
tyrosine	1
Tyrosyl	1
U	1
U34	1
UbiB	3
UbiE	2
Ubiquinone	4
UDP	16
Um32	1
Uncharacterized	13
undecaprenol	1
Undecaprenyl	4
Universal	1
unknown	10
UPF0052	1
UPF0176	1
UPF0182	1
UPF0234	1
uptake	6
Uptake	2
Uracil	1
uracil	2
uridine	1
Uridylate	1
uridyltransferase	1
Uroporphyrinogen	4
UspA	1
utilization	1
utilizing	1
UvrD	2
V	1
Val	2
Valine	1
Valyl	3
vegetative	1
via	1
VII	1
wall	1
water	1
WD	1
WD40	1
weight	1
with	11
Wzc	1
X	1
Xaa	2
Xanthine	1
Xanthosine	1
XI	1
xylulose	2
YacO	1
YajQ	1
YbbK	1
YbbL	1
YbbM	1
YbbP	1
Ycf19	1
Ycf3	1
Ycf36	1
Ycf37	1
Ycf39	1
Ycf4	1
Ycf48	1
Ycf52	1
ycf64	1
YcfH	1
YchF	1
yciO	1
YgaF	2
YggS	1
YggT	2
YgjD	1
YidC	1
YidD	1
YjeE	1
YjeF	1
YlmG	2
YlqF	2
YQFF	1
YrbA	1
yrdC	1
Z	1
zeta	2
Zinc	5
zinc	4
ZINC	2
ZipN	1
Zn	5
ZnuA	1