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cyanobase » Microcystis aeruginosa DIANCHI905

Microcystis aeruginosa DIANCHI905

Summary

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Data source name GCA_000332585.1
Full name Microcystis aeruginosa DIANCHI905 External
Taxonomy Lineage Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.

Genome Information

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Chromosomes
Name Size (bp) Genes
AOCI01000004 98,174 88
AOCI01000052 96,402 105
AOCI01000017 89,728 80
AOCI01000120 67,642 73
AOCI01000068 64,043 20
AOCI01000023 63,416 71
AOCI01000007 61,069 74
AOCI01000031 57,210 35
AOCI01000070 55,508 67
AOCI01000104 52,163 61
AOCI01000108 49,825 53
AOCI01000144 49,749 55
AOCI01000029 49,014 58
AOCI01000221 47,427 46
AOCI01000095 47,381 53
AOCI01000078 46,237 58
AOCI01000224 46,222 63
AOCI01000082 44,593 54
AOCI01000184 43,054 61
AOCI01000149 42,867 38
AOCI01000218 42,730 41
AOCI01000063 42,715 46
AOCI01000189 42,526 59
AOCI01000115 40,765 48
AOCI01000159 40,577 52
AOCI01000127 40,319 38
AOCI01000135 39,842 34
AOCI01000015 39,646 52
AOCI01000118 38,648 36
AOCI01000168 38,256 41
AOCI01000080 37,733 41
AOCI01000028 37,584 45
AOCI01000136 37,572 42
AOCI01000157 36,870 41
AOCI01000019 36,373 22
AOCI01000008 36,264 42
AOCI01000096 36,200 34
AOCI01000016 36,098 38
AOCI01000091 34,226 35
AOCI01000185 34,084 53
AOCI01000247 34,052 43
AOCI01000013 33,977 28
AOCI01000164 33,359 42
AOCI01000103 33,315 40
AOCI01000014 33,060 51
AOCI01000261 32,749 43
AOCI01000094 31,799 44
AOCI01000170 30,310 31
AOCI01000177 30,160 33
AOCI01000034 29,831 42
AOCI01000217 29,253 38
AOCI01000110 29,078 33
AOCI01000067 28,462 34
AOCI01000012 27,798 20
AOCI01000235 27,792 32
AOCI01000160 27,753 31
AOCI01000020 27,241 29
AOCI01000193 27,155 30
AOCI01000152 27,124 36
AOCI01000042 27,111 34
AOCI01000180 26,987 26
AOCI01000237 26,872 26
AOCI01000202 26,529 26
AOCI01000133 25,791 19
AOCI01000045 25,345 36
AOCI01000214 25,322 32
AOCI01000232 25,237 39
AOCI01000069 25,066 34
AOCI01000011 24,927 28
AOCI01000183 24,909 25
AOCI01000181 24,433 31
AOCI01000206 24,363 39
AOCI01000139 24,305 29
AOCI01000137 24,301 20
AOCI01000077 23,814 25
AOCI01000123 23,538 29
AOCI01000204 23,529 24
AOCI01000222 23,475 26
AOCI01000187 23,105 24
AOCI01000186 22,654 32
AOCI01000138 22,615 24
AOCI01000002 22,612 16
AOCI01000056 22,105 25
AOCI01000251 21,854 29
AOCI01000074 21,802 27
AOCI01000267 21,585 25
AOCI01000119 21,541 29
AOCI01000234 21,483 24
AOCI01000195 21,108 29
AOCI01000192 20,668 29
AOCI01000097 20,280 13
AOCI01000140 20,275 19
AOCI01000265 20,094 30
AOCI01000025 19,942 27
AOCI01000072 19,620 21
AOCI01000032 19,419 25
AOCI01000174 18,536 25
AOCI01000253 18,530 25
AOCI01000107 18,436 14
AOCI01000033 18,366 14
AOCI01000035 18,103 21
AOCI01000076 17,897 19
AOCI01000051 17,873 24
AOCI01000227 17,816 18
AOCI01000046 17,812 25
AOCI01000256 17,728 21
AOCI01000220 17,538 22
AOCI01000128 17,471 24
AOCI01000248 17,237 13
AOCI01000249 17,200 19
AOCI01000230 17,129 18
AOCI01000079 16,973 19
AOCI01000131 16,722 25
AOCI01000006 16,256 15
AOCI01000208 16,085 18
AOCI01000062 15,729 12
AOCI01000245 15,435 22
AOCI01000049 15,343 13
AOCI01000059 15,337 12
AOCI01000163 15,069 17
AOCI01000101 14,748 15
AOCI01000254 14,654 20
AOCI01000099 14,533 9
AOCI01000173 14,410 20
AOCI01000275 14,153 10
AOCI01000179 13,979 15
AOCI01000146 13,743 17
AOCI01000175 13,646 19
AOCI01000274 13,321 14
AOCI01000276 13,131 15
AOCI01000262 13,091 11
AOCI01000114 12,943 20
AOCI01000211 12,939 16
AOCI01000278 12,838 9
AOCI01000057 12,615 13
AOCI01000061 12,108 10
AOCI01000191 11,972 9
AOCI01000280 11,805 18
AOCI01000065 11,617 20
AOCI01000198 11,565 17
AOCI01000282 11,498 11
AOCI01000255 11,250 11
AOCI01000055 11,086 18
AOCI01000167 10,792 10
AOCI01000287 10,759 12
AOCI01000066 10,744 12
AOCI01000116 10,714 10
AOCI01000060 10,603 9
AOCI01000112 10,561 9
AOCI01000040 10,458 17
AOCI01000037 10,364 13
AOCI01000021 10,307 12
AOCI01000260 10,183 13
AOCI01000098 9,929 13
AOCI01000047 9,855 10
AOCI01000205 9,672 12
AOCI01000126 9,561 10
AOCI01000151 9,560 14
AOCI01000283 9,482 13
AOCI01000147 9,471 10
AOCI01000281 9,312 11
AOCI01000130 9,165 11
AOCI01000226 9,080 10
AOCI01000288 9,048 12
AOCI01000240 8,964 8
AOCI01000048 8,827 11
AOCI01000154 8,545 11
AOCI01000024 8,540 15
AOCI01000200 8,524 10
AOCI01000271 8,513 5
AOCI01000142 8,240 6
AOCI01000290 8,200 8
AOCI01000284 8,058 12
AOCI01000026 7,959 8
AOCI01000109 7,904 9
AOCI01000038 7,728 9
AOCI01000244 7,458 8
AOCI01000081 7,384 8
AOCI01000196 7,326 12
AOCI01000293 7,229 9
AOCI01000190 7,190 12
AOCI01000009 7,181 13
AOCI01000225 7,083 12
AOCI01000158 6,743 5
AOCI01000233 6,722 7
AOCI01000297 6,538 7
AOCI01000083 6,536 10
AOCI01000188 6,470 8
AOCI01000165 6,418 9
AOCI01000212 6,384 8
AOCI01000228 6,330 7
AOCI01000166 6,326 7
AOCI01000298 6,317 5
AOCI01000117 6,238 17
AOCI01000296 6,233 10
AOCI01000258 5,926 6
AOCI01000134 5,775 11
AOCI01000073 5,716 7
AOCI01000105 5,633 4
AOCI01000291 5,623 6
AOCI01000301 5,500 8
AOCI01000223 5,461 8
AOCI01000093 5,418 6
AOCI01000292 5,410 7
AOCI01000210 5,285 5
AOCI01000263 5,251 3
AOCI01000305 5,175 8
AOCI01000194 5,174 7
AOCI01000044 5,166 5
AOCI01000311 5,067 13
AOCI01000197 5,054 9
AOCI01000086 4,977 5
AOCI01000005 4,963 9
AOCI01000090 4,940 12
AOCI01000182 4,806 5
AOCI01000102 4,792 8
AOCI01000285 4,740 3
AOCI01000092 4,598 6
AOCI01000022 4,530 4
AOCI01000143 4,460 6
AOCI01000273 4,266 7
AOCI01000231 4,196 4
AOCI01000075 4,142 9
AOCI01000124 4,086 4
AOCI01000161 4,066 6
AOCI01000209 3,895 7
AOCI01000106 3,880 5
AOCI01000053 3,877 4
AOCI01000310 3,874 3
AOCI01000241 3,739 10
AOCI01000027 3,656 7
AOCI01000308 3,633 6
AOCI01000269 3,526 4
AOCI01000242 3,514 3
AOCI01000286 3,404 6
AOCI01000309 3,376 3
AOCI01000289 3,090 7
AOCI01000172 3,032 2
AOCI01000229 3,022 5
AOCI01000178 3,001 5
AOCI01000313 2,931 3
AOCI01000171 2,878 3
AOCI01000100 2,843 2
AOCI01000203 2,817 4
AOCI01000058 2,811 4
AOCI01000088 2,793 4
AOCI01000084 2,754 5
AOCI01000162 2,667 5
AOCI01000121 2,646 4
AOCI01000272 2,611 5
AOCI01000201 2,575 4
AOCI01000304 2,553 4
AOCI01000132 2,466 2
AOCI01000295 2,437 8
AOCI01000145 2,420 6
AOCI01000125 2,349 7
AOCI01000039 2,287 4
AOCI01000199 2,189 5
AOCI01000299 2,103 2
AOCI01000064 2,085 2
AOCI01000216 2,080 3
AOCI01000294 2,069 4
AOCI01000207 2,042 4
AOCI01000176 1,953 2
AOCI01000122 1,934 3
AOCI01000314 1,905 4
AOCI01000036 1,883 3
AOCI01000043 1,877 1
AOCI01000010 1,860 2
AOCI01000030 1,841 2
AOCI01000213 1,825 1
AOCI01000252 1,602 1
AOCI01000316 1,564 2
AOCI01000312 1,562 2
AOCI01000156 1,531 2
AOCI01000041 1,523 2
AOCI01000323 1,511 4
AOCI01000277 1,474 3
AOCI01000324 1,437 5
AOCI01000155 1,391 3
AOCI01000246 1,361 4
AOCI01000050 1,359 3
AOCI01000264 1,331 2
AOCI01000303 1,310 2
AOCI01000054 1,282 3
AOCI01000268 1,267 3
AOCI01000085 1,255 4
AOCI01000089 1,216 2
AOCI01000243 1,199 2
AOCI01000250 1,179 2
AOCI01000113 1,162 2
AOCI01000317 1,113 2
AOCI01000325 1,099 2
AOCI01000148 1,098 2
AOCI01000236 1,094 2
AOCI01000318 1,089 3
AOCI01000328 1,067 1
AOCI01000219 1,061 3
AOCI01000257 1,060 2
AOCI01000071 1,060 2
AOCI01000279 1,055 2
AOCI01000330 1,047 2
AOCI01000266 1,041 2
AOCI01000332 1,020 2
AOCI01000001 1,006 2
AOCI01000331 1,004 1
AOCI01000018 999 2
AOCI01000238 972 1
AOCI01000169 928 3
AOCI01000335 925 1
AOCI01000319 883 2
AOCI01000329 866 2
AOCI01000141 863 1
AOCI01000300 849 2
AOCI01000215 834 1
AOCI01000322 825 1
AOCI01000259 818 3
AOCI01000307 792 3
AOCI01000111 785 1
AOCI01000087 772 3
AOCI01000150 744 1
AOCI01000327 715 2
AOCI01000321 715 2
AOCI01000315 708 1
AOCI01000326 692 4
AOCI01000320 691 1
AOCI01000302 682 2
AOCI01000334 638 1
AOCI01000003 573 2
AOCI01000153 544 1
AOCI01000129 451 1
AOCI01000270 405 1
AOCI01000306 393 1
AOCI01000333 281 1
AOCI01000239 265 1
Total 4,858,867 5,571
Features FeaturesView : 0 features

Genes

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List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

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BLAST2
KazusaMart Dataset GCA_000332585.1

Genome-scale data

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Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

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References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

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Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

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Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000332585.1/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000332585.1/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000332585.1/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000332585.1/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000332585.1/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000332585.1/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000332585.1/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000332585.1/genes/interpro.txt (File format)

Kazusa DNA Research Institute

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