cyanobase » Fischerella muscicola SAG 1427-1 = PCC 73103

Fischerella muscicola SAG 1427-1 = PCC 73103

Summary

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Data source name GCA_000317245.1
Full name Fischerella muscicola SAG 1427-1 = PCC 73103 External
Taxonomy Lineage Cyanobacteria; Stigonematales; Fischerella.

Genome Information

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Chromosomes
Name Size (bp) Genes
AJLJ01000064 226,112 0
AJLJ01000061 163,108 0
AJLJ01000496 150,117 0
AJLJ01000076 136,207 0
AJLJ01000176 123,628 0
AJLJ01000063 120,913 0
AJLJ01000494 120,654 0
AJLJ01000375 106,962 0
AJLJ01000194 106,775 0
AJLJ01000182 102,986 0
AJLJ01000058 102,913 0
AJLJ01000207 101,822 0
AJLJ01000205 100,432 0
AJLJ01000067 96,797 0
AJLJ01000271 95,537 0
AJLJ01000050 94,259 0
AJLJ01000158 84,947 0
AJLJ01000366 80,406 0
AJLJ01000268 71,770 0
AJLJ01000371 71,504 0
AJLJ01000215 71,425 0
AJLJ01000065 70,316 0
AJLJ01000184 70,133 0
AJLJ01000358 69,994 0
AJLJ01000069 68,817 0
AJLJ01000498 67,177 0
AJLJ01000237 66,299 0
AJLJ01000210 65,878 0
AJLJ01000159 64,697 0
AJLJ01000112 63,952 0
AJLJ01000195 60,512 0
AJLJ01000052 59,657 0
AJLJ01000015 59,486 0
AJLJ01000164 57,578 0
AJLJ01000228 57,028 0
AJLJ01000013 56,071 0
AJLJ01000170 55,144 0
AJLJ01000077 54,472 0
AJLJ01000191 54,006 0
AJLJ01000370 53,767 0
AJLJ01000374 53,204 0
AJLJ01000190 49,482 0
AJLJ01000353 48,663 0
AJLJ01000246 48,519 0
AJLJ01000519 46,321 0
AJLJ01000066 44,845 0
AJLJ01000186 44,662 0
AJLJ01000206 44,076 0
AJLJ01000363 44,064 0
AJLJ01000249 44,029 0
AJLJ01000373 43,310 0
AJLJ01000054 42,515 0
AJLJ01000497 41,436 0
AJLJ01000047 40,960 0
AJLJ01000204 40,301 0
AJLJ01000072 39,357 0
AJLJ01000079 38,189 0
AJLJ01000173 37,913 0
AJLJ01000361 37,173 0
AJLJ01000082 36,991 0
AJLJ01000178 36,343 0
AJLJ01000239 36,011 0
AJLJ01000250 35,799 0
AJLJ01000018 35,407 0
AJLJ01000156 35,025 0
AJLJ01000379 35,020 0
AJLJ01000171 34,750 0
AJLJ01000270 34,638 0
AJLJ01000201 34,573 0
AJLJ01000459 34,419 0
AJLJ01000073 33,830 0
AJLJ01000214 33,731 0
AJLJ01000179 32,067 0
AJLJ01000025 30,636 0
AJLJ01000435 30,422 0
AJLJ01000192 28,981 0
AJLJ01000138 28,649 0
AJLJ01000224 28,436 0
AJLJ01000360 27,527 0
AJLJ01000125 27,372 0
AJLJ01000352 27,302 0
AJLJ01000262 26,338 0
AJLJ01000068 26,319 0
AJLJ01000437 26,218 0
AJLJ01000436 26,057 0
AJLJ01000161 25,904 0
AJLJ01000272 25,633 0
AJLJ01000216 25,250 0
AJLJ01000183 24,941 0
AJLJ01000245 24,087 0
AJLJ01000162 23,320 0
AJLJ01000167 22,536 0
AJLJ01000126 22,480 0
AJLJ01000213 21,989 0
AJLJ01000011 21,607 0
AJLJ01000355 21,343 0
AJLJ01000009 20,885 0
AJLJ01000500 20,774 0
AJLJ01000053 20,592 0
AJLJ01000267 20,288 0
AJLJ01000187 19,964 0
AJLJ01000062 19,625 0
AJLJ01000367 19,311 0
AJLJ01000172 19,162 0
AJLJ01000356 19,155 0
AJLJ01000070 19,140 0
AJLJ01000001 18,866 0
AJLJ01000345 18,386 0
AJLJ01000501 18,328 0
AJLJ01000230 18,036 0
AJLJ01000080 17,681 0
AJLJ01000469 17,476 0
AJLJ01000266 17,275 0
AJLJ01000057 16,895 0
AJLJ01000475 16,877 0
AJLJ01000127 16,785 0
AJLJ01000197 16,661 0
AJLJ01000482 16,581 0
AJLJ01000217 16,507 0
AJLJ01000083 16,411 0
AJLJ01000470 16,274 0
AJLJ01000117 16,168 0
AJLJ01000116 15,864 0
AJLJ01000169 15,674 0
AJLJ01000212 15,644 0
AJLJ01000395 15,602 0
AJLJ01000473 15,314 0
AJLJ01000231 15,195 0
AJLJ01000368 15,048 0
AJLJ01000227 15,021 0
AJLJ01000273 14,987 0
AJLJ01000243 14,945 0
AJLJ01000157 14,825 0
AJLJ01000275 14,711 0
AJLJ01000453 14,680 0
AJLJ01000269 14,279 0
AJLJ01000522 14,065 0
AJLJ01000188 13,779 0
AJLJ01000165 13,614 0
AJLJ01000012 13,032 0
AJLJ01000114 12,989 0
AJLJ01000483 12,826 0
AJLJ01000163 12,729 0
AJLJ01000160 12,725 0
AJLJ01000362 12,697 0
AJLJ01000499 12,464 0
AJLJ01000414 12,364 0
AJLJ01000247 11,764 0
AJLJ01000115 11,704 0
AJLJ01000202 11,686 0
AJLJ01000181 11,650 0
AJLJ01000051 11,609 0
AJLJ01000515 11,595 0
AJLJ01000463 11,552 0
AJLJ01000349 11,447 0
AJLJ01000455 11,319 0
AJLJ01000177 11,285 0
AJLJ01000276 11,174 0
AJLJ01000434 11,008 0
AJLJ01000481 11,004 0
AJLJ01000166 11,001 0
AJLJ01000399 10,836 0
AJLJ01000221 10,806 0
AJLJ01000416 10,783 0
AJLJ01000226 10,714 0
AJLJ01000043 10,625 0
AJLJ01000049 10,550 0
AJLJ01000429 10,439 0
AJLJ01000078 10,415 0
AJLJ01000402 10,322 0
AJLJ01000520 10,145 0
AJLJ01000208 10,045 0
AJLJ01000292 10,006 0
AJLJ01000354 9,865 0
AJLJ01000174 9,331 0
AJLJ01000410 9,317 0
AJLJ01000071 9,159 0
AJLJ01000274 9,135 0
AJLJ01000359 8,827 0
AJLJ01000019 8,786 0
AJLJ01000405 8,784 0
AJLJ01000524 8,649 0
AJLJ01000168 8,569 0
AJLJ01000026 8,127 0
AJLJ01000124 8,071 0
AJLJ01000203 7,982 0
AJLJ01000485 7,922 0
AJLJ01000286 7,846 0
AJLJ01000376 7,737 0
AJLJ01000016 7,713 0
AJLJ01000240 7,577 0
AJLJ01000104 7,517 0
AJLJ01000046 7,399 0
AJLJ01000218 7,382 0
AJLJ01000467 7,296 0
AJLJ01000400 7,264 0
AJLJ01000055 7,257 0
AJLJ01000516 7,236 0
AJLJ01000440 7,087 0
AJLJ01000059 7,080 0
AJLJ01000384 6,957 0
AJLJ01000137 6,819 0
AJLJ01000027 6,804 0
AJLJ01000142 6,758 0
AJLJ01000420 6,730 0
AJLJ01000155 6,625 0
AJLJ01000380 6,533 0
AJLJ01000107 6,397 0
AJLJ01000351 6,315 0
AJLJ01000193 6,307 0
AJLJ01000365 6,203 0
AJLJ01000045 6,145 0
AJLJ01000285 6,133 0
AJLJ01000426 6,127 0
AJLJ01000060 6,042 0
AJLJ01000464 6,027 0
AJLJ01000028 6,023 0
AJLJ01000300 6,012 0
AJLJ01000023 5,946 0
AJLJ01000185 5,601 0
AJLJ01000229 5,568 0
AJLJ01000010 5,488 0
AJLJ01000495 5,354 0
AJLJ01000035 5,339 0
AJLJ01000413 5,207 0
AJLJ01000180 5,187 0
AJLJ01000294 5,008 0
AJLJ01000024 4,891 0
AJLJ01000196 4,862 0
AJLJ01000261 4,825 0
AJLJ01000389 4,795 0
AJLJ01000439 4,776 0
AJLJ01000020 4,774 0
AJLJ01000523 4,754 0
AJLJ01000404 4,654 0
AJLJ01000074 4,543 0
AJLJ01000377 4,538 0
AJLJ01000153 4,533 0
AJLJ01000048 4,527 0
AJLJ01000235 4,507 0
AJLJ01000288 4,494 0
AJLJ01000484 4,489 0
AJLJ01000476 4,421 0
AJLJ01000412 4,369 0
AJLJ01000369 4,315 0
AJLJ01000220 4,278 0
AJLJ01000105 4,251 0
AJLJ01000135 4,212 0
AJLJ01000393 4,141 0
AJLJ01000044 4,023 0
AJLJ01000287 3,989 0
AJLJ01000199 3,981 0
AJLJ01000465 3,967 0
AJLJ01000406 3,960 0
AJLJ01000002 3,897 0
AJLJ01000424 3,873 0
AJLJ01000075 3,751 0
AJLJ01000154 3,688 0
AJLJ01000259 3,626 0
AJLJ01000490 3,588 0
AJLJ01000479 3,581 0
AJLJ01000407 3,560 0
AJLJ01000444 3,503 0
AJLJ01000382 3,503 0
AJLJ01000466 3,474 0
AJLJ01000139 3,428 0
AJLJ01000038 3,418 0
AJLJ01000428 3,410 0
AJLJ01000238 3,405 0
AJLJ01000322 3,365 0
AJLJ01000211 3,339 0
AJLJ01000323 3,336 0
AJLJ01000084 3,272 0
AJLJ01000219 3,225 0
AJLJ01000302 3,171 0
AJLJ01000056 3,161 0
AJLJ01000411 3,112 0
AJLJ01000480 3,110 0
AJLJ01000022 3,047 0
AJLJ01000003 2,926 0
AJLJ01000081 2,896 0
AJLJ01000175 2,892 0
AJLJ01000222 2,867 0
AJLJ01000441 2,846 0
AJLJ01000241 2,838 0
AJLJ01000517 2,828 0
AJLJ01000223 2,765 0
AJLJ01000036 2,727 0
AJLJ01000421 2,717 0
AJLJ01000244 2,713 0
AJLJ01000141 2,617 0
AJLJ01000308 2,489 0
AJLJ01000396 2,399 0
AJLJ01000225 2,346 0
AJLJ01000242 2,329 0
AJLJ01000381 2,277 0
AJLJ01000113 2,101 0
AJLJ01000392 2,096 0
AJLJ01000110 2,086 0
AJLJ01000301 2,052 0
AJLJ01000148 2,032 0
AJLJ01000417 1,996 0
AJLJ01000394 1,977 0
AJLJ01000422 1,974 0
AJLJ01000521 1,902 0
AJLJ01000364 1,887 0
AJLJ01000014 1,865 0
AJLJ01000005 1,864 0
AJLJ01000390 1,849 0
AJLJ01000385 1,833 0
AJLJ01000143 1,801 0
AJLJ01000425 1,767 0
AJLJ01000320 1,732 0
AJLJ01000489 1,728 0
AJLJ01000454 1,725 0
AJLJ01000472 1,718 0
AJLJ01000150 1,714 0
AJLJ01000291 1,713 0
AJLJ01000474 1,703 0
AJLJ01000094 1,685 0
AJLJ01000486 1,631 0
AJLJ01000438 1,607 0
AJLJ01000383 1,604 0
AJLJ01000085 1,576 0
AJLJ01000433 1,563 0
AJLJ01000257 1,554 0
AJLJ01000008 1,540 0
AJLJ01000443 1,534 0
AJLJ01000290 1,523 0
AJLJ01000284 1,505 0
AJLJ01000103 1,503 0
AJLJ01000289 1,472 0
AJLJ01000111 1,466 0
AJLJ01000311 1,463 0
AJLJ01000098 1,460 0
AJLJ01000029 1,454 0
AJLJ01000189 1,450 0
AJLJ01000263 1,443 0
AJLJ01000147 1,438 0
AJLJ01000397 1,438 0
AJLJ01000140 1,396 0
AJLJ01000031 1,390 0
AJLJ01000350 1,389 0
AJLJ01000096 1,368 0
AJLJ01000342 1,358 0
AJLJ01000088 1,348 0
AJLJ01000256 1,341 0
AJLJ01000391 1,328 0
AJLJ01000403 1,317 0
AJLJ01000430 1,312 0
AJLJ01000280 1,309 0
AJLJ01000108 1,291 0
AJLJ01000324 1,286 0
AJLJ01000506 1,249 0
AJLJ01000087 1,217 0
AJLJ01000297 1,202 0
AJLJ01000021 1,197 0
AJLJ01000151 1,192 0
AJLJ01000130 1,189 0
AJLJ01000200 1,186 0
AJLJ01000316 1,181 0
AJLJ01000306 1,175 0
AJLJ01000442 1,170 0
AJLJ01000106 1,129 0
AJLJ01000328 1,122 0
AJLJ01000423 1,109 0
AJLJ01000419 1,108 0
AJLJ01000093 1,095 0
AJLJ01000086 1,085 0
AJLJ01000279 1,071 0
AJLJ01000006 1,065 0
AJLJ01000198 1,047 0
AJLJ01000344 1,043 0
AJLJ01000293 1,031 0
AJLJ01000378 1,026 0
AJLJ01000427 1,022 0
AJLJ01000468 1,020 0
AJLJ01000037 985 0
AJLJ01000478 958 0
AJLJ01000509 956 0
AJLJ01000409 953 0
AJLJ01000039 944 0
AJLJ01000232 930 0
AJLJ01000017 925 0
AJLJ01000461 918 0
AJLJ01000415 918 0
AJLJ01000346 914 0
AJLJ01000314 909 0
AJLJ01000122 908 0
AJLJ01000488 899 0
AJLJ01000132 883 0
AJLJ01000401 874 0
AJLJ01000089 872 0
AJLJ01000236 868 0
AJLJ01000277 864 0
AJLJ01000278 855 0
AJLJ01000119 840 0
AJLJ01000372 808 0
AJLJ01000133 802 0
AJLJ01000260 802 0
AJLJ01000511 799 0
AJLJ01000101 796 0
AJLJ01000131 779 0
AJLJ01000518 771 0
AJLJ01000254 758 0
AJLJ01000458 756 0
AJLJ01000447 751 0
AJLJ01000304 748 0
AJLJ01000386 745 0
AJLJ01000252 714 0
AJLJ01000451 714 0
AJLJ01000258 713 0
AJLJ01000149 705 0
AJLJ01000347 702 0
AJLJ01000492 693 0
AJLJ01000315 688 0
AJLJ01000460 679 0
AJLJ01000144 664 0
AJLJ01000318 661 0
AJLJ01000251 654 0
AJLJ01000445 646 0
AJLJ01000209 644 0
AJLJ01000040 639 0
AJLJ01000310 635 0
AJLJ01000090 634 0
AJLJ01000462 620 0
AJLJ01000312 620 0
AJLJ01000357 617 0
AJLJ01000136 603 0
AJLJ01000041 594 0
AJLJ01000432 588 0
AJLJ01000282 587 0
AJLJ01000146 587 0
AJLJ01000248 586 0
AJLJ01000327 581 0
AJLJ01000255 576 0
AJLJ01000004 555 0
AJLJ01000134 555 0
AJLJ01000408 555 0
AJLJ01000264 549 0
AJLJ01000343 544 0
AJLJ01000299 528 0
AJLJ01000118 526 0
AJLJ01000233 513 0
AJLJ01000418 509 0
AJLJ01000281 509 0
AJLJ01000032 507 0
AJLJ01000457 504 0
AJLJ01000330 500 0
AJLJ01000507 496 0
AJLJ01000471 493 0
AJLJ01000398 490 0
AJLJ01000283 487 0
AJLJ01000145 466 0
AJLJ01000514 461 0
AJLJ01000309 451 0
AJLJ01000129 446 0
AJLJ01000303 446 0
AJLJ01000265 444 0
AJLJ01000095 442 0
AJLJ01000348 436 0
AJLJ01000502 434 0
AJLJ01000033 431 0
AJLJ01000298 430 0
AJLJ01000505 422 0
AJLJ01000449 419 0
AJLJ01000504 413 0
AJLJ01000034 401 0
AJLJ01000120 398 0
AJLJ01000100 398 0
AJLJ01000510 397 0
AJLJ01000456 393 0
AJLJ01000305 392 0
AJLJ01000152 381 0
AJLJ01000446 380 0
AJLJ01000329 379 0
AJLJ01000450 377 0
AJLJ01000487 373 0
AJLJ01000128 371 0
AJLJ01000332 367 0
AJLJ01000091 365 0
AJLJ01000296 359 0
AJLJ01000452 353 0
AJLJ01000334 352 0
AJLJ01000109 347 0
AJLJ01000513 344 0
AJLJ01000333 340 0
AJLJ01000042 339 0
AJLJ01000335 334 0
AJLJ01000123 331 0
AJLJ01000326 324 0
AJLJ01000317 320 0
AJLJ01000321 317 0
AJLJ01000491 309 0
AJLJ01000477 303 0
AJLJ01000493 302 0
AJLJ01000331 296 0
AJLJ01000295 295 0
AJLJ01000336 293 0
AJLJ01000325 291 0
AJLJ01000340 278 0
AJLJ01000121 272 0
AJLJ01000030 270 0
AJLJ01000007 269 0
AJLJ01000503 268 0
AJLJ01000387 267 0
AJLJ01000338 259 0
AJLJ01000339 257 0
AJLJ01000092 256 0
AJLJ01000099 256 0
AJLJ01000337 254 0
AJLJ01000234 251 0
AJLJ01000102 248 0
AJLJ01000448 248 0
AJLJ01000097 247 0
AJLJ01000341 242 0
AJLJ01000319 236 0
AJLJ01000313 234 0
AJLJ01000307 230 0
AJLJ01000431 229 0
AJLJ01000253 223 0
AJLJ01000512 214 0
AJLJ01000388 203 0
AJLJ01000508 201 0
Total 7,360,256 0
Features FeaturesView : 0 features

Genes

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List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

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BLAST2
KazusaMart Dataset GCA_000317245.1

Genome-scale data

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Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

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References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

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Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

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Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000317245.1/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000317245.1/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000317245.1/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000317245.1/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000317245.1/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000317245.1/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000317245.1/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000317245.1/genes/interpro.txt (File format)

Kazusa DNA Research Institute

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