cyanobase » Fischerella thermalis PCC 7521

Fischerella thermalis PCC 7521

Summary

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Data source name GCA_000317225.1
Full name Fischerella thermalis PCC 7521 External
Taxonomy Lineage Cyanobacteria; Stigonematales; Fischerella.

Genome Information

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Chromosomes
Name Size (bp) Genes
AJLL01000005 271,929 0
AJLL01000033 215,160 0
AJLL01000090 202,651 0
AJLL01000081 198,534 0
AJLL01000089 183,137 0
AJLL01000061 175,749 0
AJLL01000012 166,063 0
AJLL01000098 156,340 0
AJLL01000106 153,819 0
AJLL01000023 151,545 0
AJLL01000077 122,376 0
AJLL01000070 122,255 0
AJLL01000010 120,957 0
AJLL01000100 120,100 0
AJLL01000036 103,902 0
AJLL01000063 102,454 0
AJLL01000037 101,563 0
AJLL01000028 98,340 0
AJLL01000008 94,183 0
AJLL01000009 86,997 0
AJLL01000046 83,796 0
AJLL01000060 79,062 0
AJLL01000039 77,650 0
AJLL01000022 73,881 0
AJLL01000051 73,724 0
AJLL01000048 73,279 0
AJLL01000007 72,329 0
AJLL01000097 71,606 0
AJLL01000016 71,358 0
AJLL01000035 69,240 0
AJLL01000096 69,211 0
AJLL01000103 68,930 0
AJLL01000068 64,769 0
AJLL01000038 62,303 0
AJLL01000049 62,025 0
AJLL01000057 59,823 0
AJLL01000101 59,808 0
AJLL01000052 59,592 0
AJLL01000066 57,458 0
AJLL01000034 55,480 0
AJLL01000104 52,193 0
AJLL01000069 47,961 0
AJLL01000014 47,877 0
AJLL01000027 45,708 0
AJLL01000058 45,391 0
AJLL01000011 44,998 0
AJLL01000102 42,896 0
AJLL01000091 41,268 0
AJLL01000017 41,125 0
AJLL01000078 38,660 0
AJLL01000075 37,992 0
AJLL01000072 36,714 0
AJLL01000045 35,101 0
AJLL01000087 33,600 0
AJLL01000047 31,838 0
AJLL01000064 31,696 0
AJLL01000107 29,996 0
AJLL01000059 28,588 0
AJLL01000002 23,528 0
AJLL01000030 21,493 0
AJLL01000099 19,693 0
AJLL01000025 19,158 0
AJLL01000013 18,708 0
AJLL01000085 17,774 0
AJLL01000105 17,668 0
AJLL01000084 17,662 0
AJLL01000032 17,182 0
AJLL01000003 16,172 0
AJLL01000031 15,999 0
AJLL01000076 14,695 0
AJLL01000024 14,399 0
AJLL01000071 13,201 0
AJLL01000062 13,158 0
AJLL01000029 13,087 0
AJLL01000082 12,870 0
AJLL01000041 12,535 0
AJLL01000006 9,638 0
AJLL01000095 9,396 0
AJLL01000080 8,255 0
AJLL01000004 7,871 0
AJLL01000040 6,937 0
AJLL01000086 6,030 0
AJLL01000094 4,787 0
AJLL01000083 3,986 0
AJLL01000079 3,753 0
AJLL01000073 3,537 0
AJLL01000015 3,438 0
AJLL01000026 3,331 0
AJLL01000042 3,212 0
AJLL01000093 2,809 0
AJLL01000065 2,526 0
AJLL01000092 2,034 0
AJLL01000113 1,874 0
AJLL01000019 1,557 0
AJLL01000074 1,512 0
AJLL01000088 1,332 0
AJLL01000050 1,245 0
AJLL01000109 1,171 0
AJLL01000056 1,131 0
AJLL01000067 1,110 0
AJLL01000108 1,098 0
AJLL01000055 1,059 0
AJLL01000001 1,028 0
AJLL01000111 981 0
AJLL01000112 912 0
AJLL01000138 770 0
AJLL01000137 755 0
AJLL01000141 609 0
AJLL01000021 584 0
AJLL01000114 496 0
AJLL01000110 465 0
AJLL01000020 461 0
AJLL01000116 459 0
AJLL01000117 455 0
AJLL01000119 446 0
AJLL01000120 436 0
AJLL01000122 433 0
AJLL01000054 432 0
AJLL01000118 429 0
AJLL01000053 424 0
AJLL01000124 418 0
AJLL01000018 409 0
AJLL01000125 408 0
AJLL01000126 405 0
AJLL01000127 394 0
AJLL01000128 382 0
AJLL01000115 381 0
AJLL01000136 360 0
AJLL01000129 343 0
AJLL01000130 333 0
AJLL01000044 333 0
AJLL01000140 331 0
AJLL01000123 330 0
AJLL01000131 322 0
AJLL01000121 297 0
AJLL01000132 291 0
AJLL01000139 290 0
AJLL01000133 290 0
AJLL01000134 287 0
AJLL01000135 264 0
AJLL01000043 238 0
Total 5,438,272 0
Features FeaturesView : 0 features

Genes

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List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

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BLAST2
KazusaMart Dataset GCA_000317225.1

Genome-scale data

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Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

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References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

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Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

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Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000317225.1/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000317225.1/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000317225.1/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000317225.1/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000317225.1/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000317225.1/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000317225.1/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000317225.1/genes/interpro.txt (File format)

Kazusa DNA Research Institute

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