cyanobase » Microcystis aeruginosa PCC 9432

Microcystis aeruginosa PCC 9432

Summary

? | +/- | Top
Data source name GCA_000307995.2
Full name Microcystis aeruginosa PCC 9432 External
Taxonomy Lineage Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.

Genome Information

? | +/- | Top
Chromosomes
Name Size (bp) Genes
HE972586 334,624 321
HE972538 277,768 261
HE972533 235,429 245
HE972565 230,301 210
HE972589 211,558 210
HE972595 199,191 189
HE972571 183,698 169
HE972563 168,975 157
HE972525 165,438 167
HE972530 158,848 150
HE972531 141,198 134
HE972542 136,265 134
HE972554 130,605 126
HE972537 121,878 107
HE972547 114,079 76
HE972566 113,405 139
HE972591 112,600 123
HE972552 104,740 87
HE972557 99,736 114
HE972545 98,631 99
HE972560 91,771 101
HE972567 87,635 88
HE972573 76,480 74
HE972551 72,736 77
HE972578 65,909 66
HE972558 65,900 51
HE972529 59,454 60
HE972594 54,841 47
HE972569 52,580 45
HE972583 51,952 50
HE972577 50,272 44
HE972524 46,568 47
HE972555 44,533 33
HE972544 43,771 44
HE972559 43,283 32
HE972535 43,221 38
HE972585 42,710 43
HE972572 41,505 38
HE972543 41,238 42
HE972575 39,301 38
HE972527 33,103 27
HE972587 26,962 23
HE972588 23,591 28
HE972584 23,422 28
HE972574 23,239 25
HE972549 21,905 17
HE972539 21,682 21
HE972568 21,131 25
HE972534 20,273 27
HE972562 19,082 17
HE972528 18,995 17
HE972532 18,114 14
HE972553 17,712 18
HE972561 16,066 19
HE972550 15,602 13
HE972582 14,748 11
HE972541 14,506 21
HE972576 14,352 17
HE972556 13,301 21
HE972523 13,134 13
HE972596 12,986 17
HE972581 12,488 12
HE972592 11,220 7
HE972546 11,198 10
HE972570 10,086 9
HE972526 6,951 13
HE972522 6,505 5
HE972536 5,174 4
HE972579 4,361 6
HE972540 3,694 3
HE972580 3,575 4
HE972564 3,317 3
HE972593 2,863 3
HE972548 2,831 1
HE972590 2,236 4
HE972610 1,697 3
HE972609 1,530 0
HE972621 1,523 1
HE972630 1,445 1
HE972612 1,404 1
HE972623 1,240 1
HE972603 1,134 0
HE972643 1,129 1
HE972633 1,056 1
HE972646 1,043 1
HE972604 1,040 2
HE972620 1,038 2
HE972622 1,005 1
HE972644 1,005 0
HE972645 987 0
HE972638 981 1
HE972642 973 1
HE972613 956 1
HE972634 941 1
HE972602 935 0
HE972629 929 2
HE972600 911 1
HE972628 884 1
HE972632 859 2
HE972608 856 1
HE972647 856 1
HE972599 853 0
HE972650 836 0
HE972606 830 1
HE972617 814 0
HE972624 803 0
HE972652 799 0
HE972611 796 0
HE972614 778 1
HE972636 768 1
HE972625 720 1
HE972616 706 0
HE972615 704 1
HE972618 702 1
HE972640 698 0
HE972597 688 1
HE972649 685 0
HE972627 673 0
HE972648 663 1
HE972598 663 0
HE972619 656 1
HE972631 639 1
HE972651 633 0
HE972641 630 1
HE972601 626 1
HE972605 624 1
HE972607 622 1
HE972639 613 0
HE972637 612 0
HE972626 612 1
HE972635 605 0
HE972653 502 1
Total 4,994,942 4,822
Features FeaturesView : 0 features

Genes

? | +/- | Top
List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

? | +/- | Top
BLAST2
KazusaMart Dataset GCA_000307995.2

Genome-scale data

? | +/- | Top
Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

? | +/- | Top
References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

? | +/- | Top
Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

? | +/- | Top
Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000307995.2/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000307995.2/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000307995.2/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000307995.2/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000307995.2/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000307995.2/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000307995.2/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000307995.2/genes/interpro.txt (File format)

Kazusa DNA Research Institute

Licence and disclaimer