cyanobase » Arthrospira maxima CS-328

Arthrospira maxima CS-328

Summary

? | +/- | Top
Data source name GCA_000173555.1
Full name Arthrospira maxima CS-328 External
Taxonomy Lineage Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.

Genome Information

? | +/- | Top
Chromosomes
Name Size (bp) Genes
ABYK01000001 324,197 265
ABYK01000002 245,221 197
ABYK01000003 233,769 240
ABYK01000004 194,379 170
ABYK01000005 194,062 166
ABYK01000006 187,502 207
ABYK01000007 169,987 152
ABYK01000008 156,370 144
ABYK01000009 152,771 140
ABYK01000010 148,220 159
ABYK01000011 147,072 173
ABYK01000012 140,954 142
ABYK01000013 135,138 127
ABYK01000014 126,630 105
ABYK01000015 113,839 133
ABYK01000016 102,162 94
ABYK01000017 98,640 79
ABYK01000018 93,767 85
ABYK01000019 92,573 86
ABYK01000020 92,543 93
ABYK01000021 88,534 71
ABYK01000022 87,901 91
ABYK01000023 83,505 103
ABYK01000024 81,391 59
ABYK01000025 79,505 71
ABYK01000026 79,039 78
ABYK01000027 77,061 58
ABYK01000028 70,934 74
ABYK01000029 68,980 85
ABYK01000030 67,373 82
ABYK01000031 66,887 75
ABYK01000032 64,325 63
ABYK01000033 60,271 66
ABYK01000034 59,098 72
ABYK01000035 58,057 58
ABYK01000036 54,195 44
ABYK01000037 51,285 42
ABYK01000038 50,426 39
ABYK01000039 47,684 49
ABYK01000040 47,050 41
ABYK01000041 46,875 41
ABYK01000042 45,781 50
ABYK01000043 44,830 39
ABYK01000044 42,730 42
ABYK01000045 41,778 44
ABYK01000046 41,019 45
ABYK01000047 39,443 45
ABYK01000048 39,385 46
ABYK01000049 38,308 32
ABYK01000050 36,750 28
ABYK01000051 36,670 38
ABYK01000052 35,756 27
ABYK01000053 34,988 27
ABYK01000054 33,291 33
ABYK01000055 32,549 32
ABYK01000056 32,166 27
ABYK01000057 31,933 32
ABYK01000058 30,991 31
ABYK01000059 30,448 41
ABYK01000060 29,664 24
ABYK01000061 28,279 28
ABYK01000062 28,030 26
ABYK01000063 27,663 23
ABYK01000064 27,634 18
ABYK01000065 27,220 25
ABYK01000066 26,298 19
ABYK01000067 26,099 15
ABYK01000068 24,944 26
ABYK01000069 21,785 25
ABYK01000070 19,933 27
ABYK01000071 19,699 19
ABYK01000072 19,218 14
ABYK01000073 18,133 14
ABYK01000074 18,022 15
ABYK01000075 16,671 13
ABYK01000076 16,332 17
ABYK01000077 16,311 22
ABYK01000078 16,069 15
ABYK01000079 15,511 16
ABYK01000080 15,203 12
ABYK01000081 15,077 18
ABYK01000082 14,879 13
ABYK01000083 14,810 17
ABYK01000084 14,421 18
ABYK01000085 14,214 14
ABYK01000086 13,899 13
ABYK01000087 13,853 11
ABYK01000088 13,387 11
ABYK01000089 13,173 11
ABYK01000090 12,899 6
ABYK01000091 11,272 11
ABYK01000092 10,736 12
ABYK01000093 10,529 13
ABYK01000094 10,435 8
ABYK01000095 10,122 17
ABYK01000096 10,092 8
ABYK01000097 9,920 7
ABYK01000098 7,544 8
ABYK01000099 7,531 11
ABYK01000100 7,411 7
ABYK01000101 7,381 3
ABYK01000102 6,781 8
ABYK01000103 4,990 7
ABYK01000104 4,569 3
ABYK01000105 4,477 3
ABYK01000106 4,142 4
ABYK01000107 4,035 3
ABYK01000108 3,934 7
ABYK01000109 3,914 1
ABYK01000110 3,684 2
ABYK01000111 3,466 7
ABYK01000112 3,329 2
ABYK01000113 3,277 5
ABYK01000114 3,275 4
ABYK01000115 3,215 4
ABYK01000116 3,120 3
ABYK01000117 2,988 3
ABYK01000118 2,905 5
ABYK01000119 2,685 2
ABYK01000120 2,681 3
ABYK01000121 2,593 4
ABYK01000122 2,587 3
ABYK01000123 2,585 1
ABYK01000124 2,289 2
ABYK01000125 2,179 1
ABYK01000126 2,146 3
ABYK01000127 2,090 3
ABYK01000128 2,060 4
ABYK01000129 2,027 3
Total 6,003,314 5,728
Features FeaturesView : 0 features

Genes

? | +/- | Top
List GenesView csv txt FAA
Geneset GenesetView
Function category GeneCategoryView csv txt
Annotation Gene Annotation WordCloudView

Tools and analysis

? | +/- | Top
BLAST2
KazusaMart Dataset GCA_000173555.1

Genome-scale data

? | +/- | Top
Curated mutant information Genes and Mutants - as known as CyanoGenes/Mutants
Proteome
Interactome
Transcriptome
Bibliome References from Kazusa GeneIndexing articles External

Bibliography

? | +/- | Top
References
Gene Indexing Kazusa GeneIndexing articles External Feed-icon

Resources

? | +/- | Top
Data dowonload Distribution of Sequence and Annotated Data Files (FTP) External
Sequence data INSDB DNA DataBank FlatFiles External
Social genome annotation
DAS service
NCBI Taxonomy Taxonomy ID: External
KEGG GENOME External
UniProt taxonomy: in UniProt External

API

? | +/- | Top
Genomes Chromosomes/Plasmids
Genes File format:
ColumnDescription or example
1Data source nameSynechocystis
2IDslr1311
3Chromosome nameChr
4Start position7229
5End position8311
6Orientation+ or -
7Definitionphotosystem II D1 protein
Protein sequences /cyanobase/GCA_000173555.1/genes.faa -- AminoAcids sequence in Fasta format.
Nucleotide sequences
Gene symbols /cyanobase/GCA_000173555.1/genes/search/dsn/gene_symbol.txt (File format)
GeneIndex gnames /cyanobase/GCA_000173555.1/genes/search/dsn/gi_gname.txt (File format)
Gene function category File format:
ColumnDescription or example
1Gene IDsll0084
2Gene Deffinitionputative phosphatase
3First category IDA
4First category nameAmino acid biosynthesis
5Second category IDA1
6Second category nameAromatic amino acid family
Gene annotation word clouds /cyanobase/GCA_000173555.1/genes/word_cloud.txt -- tab delimitered text format.
File format:
ColumnDescription or example
1Word
2CountInteger
/cyanobase/GCA_000173555.1/genes/word_cloud?style=plain -- Plain view in html
/cyanobase/GCA_000173555.1/genes/word_cloud?c=10 -- 10 counts cut-off in html.
GO Terms by ipr2go /api/cyanobase/GCA_000173555.1/genes/goterm.txt (File format)
InterProScan matches /api/cyanobase/GCA_000173555.1/genes/interpro.txt (File format)

Kazusa DNA Research Institute

Licence and disclaimer