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Full-text search result: 46 genes by "photosystem II" TXT SET

Synechococcus sp. WH 7803 (46 genes ) TXT SET

SynWH7803_0087 Gene product photosystem II reaction center protein PsbZ
GO term Biological Process: photosystem II stabilization (GO:0042549)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR002644 Photosystem II reaction centre protein PsbZ; BlastProDom:PD004770 PSII_PsbZ
InterPro IPR002644 Photosystem II reaction centre protein PsbZ; HMMPfam:PF01737 Ycf9
InterPro IPR002644 Photosystem II reaction centre protein PsbZ; HMMTigr:TIGR03043 PS_II_psbZ
Blast Hits [TAIR_pep] ATCG00300.1 | Symbols: YCF9 | encodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II. | chrC:35751-35939 FORWARD
Blast Hits [nr] ref|ZP_01125449.1| photosystem II reaction center protein PsbZ [Synechococcus sp. WH 7805] gi|88786134|gb|EAR17296.1| photosystem II reaction center protein PsbZ [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSBZ_SYNP6 (sp|Q5N0X7) Photosystem II reaction center protein Z OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psbZ PE=3 SV=1
SynWH7803_0246 Gene product photosystem II reaction center protein PsbJ
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR002682 Photosystem II protein PsbJ; HMMPfam:PF01788 PsbJ
Blast Hits [nr] ref|ZP_01123600.1| photosystem II reaction center protein PsbJ [Synechococcus sp. WH 7805] gi|116075548|ref|ZP_01472807.1| photosystem II reaction center protein PsbJ [Synechococcus sp. RS9916] gi|88788128|gb|EAR19284.1| photosystem II reaction center protein PsbJ [Synechococcus sp. WH 7805] gi|116066863|gb|EAU72618.1| photosystem II reaction center protein PsbJ [Synechococcus sp. RS9916]
Blast Hits [sprot] PSBJ_SYNS3 (sp|Q0IDK0) Photosystem II reaction center protein J OS=Synechococcus sp. (strain CC9311) GN=psbJ PE=3 SV=1
SynWH7803_0248 GO term Cellular Component: photosystem II (GO:0009523)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR006216 Photosystem II protein cytochrome b559, conserved site; PatternScan:PS00537 CYTOCHROME_B559
InterPro IPR006241 Photosystem II protein cytochrome b559, beta subunit; HMMPIR:PIRSF000037 PsbF
InterPro IPR006241 Photosystem II protein cytochrome b559, beta subunit; HMMTigr:TIGR01333 cyt_b559_beta
InterPro IPR013081 Photosystem II protein cytochrome b559, N-terminal; HMMPfam:PF00283 Cytochrom_B559
SynWH7803_0249 GO term Cellular Component: photosystem II (GO:0009523)
GO term Cellular Component: plasma membrane-derived thylakoid photosystem II (GO:0030096)
InterPro IPR006217 Photosystem II protein cytochrome b559, alpha subunit; HMMPIR:PIRSF000036 PsbE
InterPro IPR006217 Photosystem II protein cytochrome b559, alpha subunit; HMMTigr:TIGR01332 cyt_b559_alpha
InterPro IPR013081 Photosystem II protein cytochrome b559, N-terminal; HMMPfam:PF00283 Cytochrom_B559
InterPro IPR013082 Photosystem II protein cytochrome b559, alpha subunit, lumenal region; HMMPfam:PF00284 Cytochrom_B559a
SynWH7803_0250 Gene product Uncharacterized protein related to plant photosystem II stability/assembly factor
InterPro IPR016705 Photosystem II stability/assembly factor, HCF136; HMMPIR:PIRSF017875 PSII_HCF136
Blast Hits [nr] ref|ZP_01123596.1| photosystem II stability/assembly factor-like protein [Synechococcus sp. WH 7805] gi|88788124|gb|EAR19280.1| photosystem II stability/assembly factor-like protein [Synechococcus sp. WH 7805]
SynWH7803_0312 Gene product photosystem II reaction center protein N
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR003398 Photosystem II protein PsbN; BlastProDom:PD005510 PSII_PsbN
InterPro IPR003398 Photosystem II protein PsbN; HMMPfam:PF02468 PsbN
Blast Hits [nr] ref|YP_729543.1| photosystem II reaction center protein N [Synechococcus sp. CC9311] gi|123328016|sp|Q0IDC9.1|PSBN_SYNS3 RecName: Full=Protein psbN gi|113880332|gb|ABI45290.1| photosystem II reaction center protein PsbN [Synechococcus sp. CC9311]
SynWH7803_0353 Gene product Photosystem II manganese-stabilizing protein PsbO
GO term Biological Process: photosystem II stabilization (GO:0042549)
InterPro IPR002628 Photosystem II manganese-stabilising protein PsbO; HMMPfam:PF01716 MSP
Blast Hits [TAIR_pep] AT3G50820.1 | Symbols: PSBO2, PSBO-2, OEC33 | PSBO2 (PHOTOSYSTEM II SUBUNIT O-2); oxygen evolving/ poly(U) binding | chr3:18891008-18892311 REVERSE
Blast Hits [nr] ref|ZP_01123481.1| photosystem II manganese-stabilizing polypeptide [Synechococcus sp. WH 7805] gi|88788009|gb|EAR19165.1| photosystem II manganese-stabilizing polypeptide [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSBO_SYNE7 (sp|P11472) Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1
SynWH7803_0397 Gene product Photosystem I reaction center subunit VIII
InterPro IPR001302 Photosystem I reaction centre, subunit VIII; HMMPfam:PF00796 PSI_8
InterPro IPR001302 Photosystem I reaction centre, subunit VIII; HMMTigr:TIGR03052 PS_I_psaI
InterPro IPR001302 Photosystem I reaction centre, subunit VIII; superfamily:SSF81540 PSI_su8
Blast Hits [sprot] PSAI_PROMA (sp|O87786) Photosystem I reaction center subunit VIII OS=Prochlorococcus marinus GN=psaI PE=3 SV=2
SynWH7803_0366 Gene product Photosystem II protein D1
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000484 Photosynthetic reaction centre, L/M; superfamily:SSF81483 Bacterial photosystem II reaction centre, L and M subunits
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HAMAP:MF_01379 PSBA_MF_01379
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HMMTigr:TIGR01151 psbA: photosystem q(b) protein
Blast Hits [TAIR_pep] ATCG00020.1 | Symbols: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE
Blast Hits [nr] ref|ZP_01080882.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|87125349|ref|ZP_01081195.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167118|gb|EAQ68379.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167355|gb|EAQ68615.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917]
Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_0247 Gene product photosystem II reaction center L
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR003372 Photosystem II protein PsbL; BlastProDom:PD005113 Q3H8M0_TRIER_Q3H8M0;
InterPro IPR003372 Photosystem II protein PsbL; HAMAP:MF_01317 PSBL_MF_01317
InterPro IPR003372 Photosystem II protein PsbL; HMMPfam:PF02419 PsbL
Blast Hits [nr] ref|YP_729473.1| photosystem II reaction center L [Synechococcus sp. CC9311] gi|123132765|sp|Q0IDJ9.1|PSBL_SYNS3 RecName: Full=Photosystem II reaction center protein L; Short=PSII-L; AltName: Full=PSII 5 kDa protein gi|113882349|gb|ABI47307.1| photosystem II reaction center protein PsbL [Synechococcus sp. CC9311]
Blast Hits [sprot] PSBL_SYNS3 (sp|Q0IDJ9) Photosystem II reaction center protein L OS=Synechococcus sp. (strain CC9311) GN=psbL PE=3 SV=1
SynWH7803_0287 Gene product photosystem II reaction center protein PsbK precursor
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR003687 Photosystem II protein PsbK; HAMAP:MF_00441 PSBK_MF_00441
InterPro IPR003687 Photosystem II protein PsbK; HMMPfam:PF02533 PsbK
Blast Hits [nr] ref|YP_002049151.1| photosystem II reaction center protein PsbK precursor [Paulinella chromatophora] gi|171191979|gb|ACB42941.1| photosystem II reaction center protein PsbK precursor [Paulinella chromatophora]
Blast Hits [sprot] PSBK_SYNS3 (sp|Q0IDF4) Photosystem II reaction center protein K OS=Synechococcus sp. (strain CC9311) GN=psbK PE=3 SV=1
SynWH7803_0310 Gene product photosystem II reaction center I protein PsbI
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR003686 Photosystem II protein PsbI; HAMAP:MF_01316 PSBI_MF_01316
InterPro IPR003686 Photosystem II protein PsbI; HMMPfam:PF02532 PsbI
Blast Hits [nr] ref|YP_292810.1| photosystem II reaction center I protein I [Prochlorococcus marinus str. NATL2A] gi|124025044|ref|YP_001014160.1| photosystem II reaction center I protein I [Prochlorococcus marinus str. NATL1A] gi|123620434|sp|Q46HC1.1|PSBI_PROMT RecName: Full=Photosystem II reaction center protein I; Short=PSII-I; AltName: Full=PSII 4.4 kDa protein gi|156633577|sp|A2C085.1|PSBI_PROM1 RecName: Full=Photosystem II reaction center protein I; Short=PSII-I; AltName: Full=PSII 4.4 kDa protein gi|72003305|gb|AAZ59107.1| photosystem II reaction center PsbI protein [Prochlorococcus marinus str. NATL2A] gi|123960112|gb|ABM74895.1| photosystem II reaction center PsbI protein [Prochlorococcus marinus str. NATL1A]
SynWH7803_0313 Gene product photosystem II reaction center protein PsbH
GO term Cellular Component: photosystem II (GO:0009523)
InterPro IPR001056 Photosystem II phosphoprotein PsbH; BlastProDom:PD003584 PSBH_SYNPX_Q7U9I7;
InterPro IPR001056 Photosystem II phosphoprotein PsbH; HAMAP:MF_00752 PSBH_MF_00752
InterPro IPR001056 Photosystem II phosphoprotein PsbH; HMMPfam:PF00737 PsbH
Blast Hits [TAIR_pep] ATCG00710.1 | Symbols: PSBH | Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII. | chrC:74485-74706 FORWARD
Blast Hits [nr] ref|ZP_01472880.1| photosystem II reaction center protein PsbH [Synechococcus sp. RS9916] gi|116066936|gb|EAU72691.1| photosystem II reaction center protein PsbH [Synechococcus sp. RS9916]
Blast Hits [sprot] PSBH_SYNS3 (sp|Q0IDC8) Photosystem II reaction center protein H OS=Synechococcus sp. (strain CC9311) GN=psbH PE=3 SV=1
SynWH7803_0518 Gene product Photosystem II P680 chlorophyll A apoprotein (CP-47 protein)
InterPro IPR000932 Photosystem antenna protein-like; HMMPfam:PF00421 PSII
InterPro IPR017486 Photosystem II, PsbB; HMMTigr:TIGR03039 PS_II_CP47
Blast Hits [TAIR_pep] ATCG00680.1 | Symbols: PSBB | encodes for CP47, subunit of the photosystem II reaction center. | chrC:72371-73897 FORWARD
Blast Hits [nr] ref|ZP_01123312.1| photosystem II chlorophyll-binding protein CP47 [Synechococcus sp. WH 7805] gi|88787840|gb|EAR18996.1| photosystem II chlorophyll-binding protein CP47 [Synechococcus sp. WH 7805]
Blast Hits [pln_est] gb|GR302745|GR302745 WRIC_361 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II 47 kDa protein, mRNA sequence.
Blast Hits [sprot] PSBB_ANASP (sp|P20093) Photosystem II CP47 chlorophyll apoprotein OS=Anabaena sp. (strain PCC 7120) GN=psbB PE=3 SV=1
SynWH7803_0520 Gene product Photosystem II reaction center M protein
GO term Cellular Component: photosystem II (GO:0009523)
InterPro IPR007826 Photosystem II, PsbM; HMMPfam:PF05151 PsbM
InterPro IPR007826 Photosystem II, PsbM; HMMTigr:TIGR03038 PS_II_psbM
Blast Hits [nr] ref|ZP_01123310.1| photosystem II reaction center protein PsbM [Synechococcus sp. WH 7805] gi|88787838|gb|EAR18994.1| photosystem II reaction center protein PsbM [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSBM_SYNS3 (sp|Q0ICR0) Photosystem II reaction center protein M OS=Synechococcus sp. (strain CC9311) GN=psbM PE=3 SV=1
SynWH7803_0517 Gene product photosystem II reaction center protein T
GO term Cellular Component: photosystem II reaction center (GO:0009539)
InterPro IPR001743 Photosystem II protein PsbT; HAMAP:MF_00808 PSBT_MF_00808
InterPro IPR001743 Photosystem II protein PsbT; HMMPfam:PF01405 PsbT
Blast Hits [TAIR_pep] ATCG00690.1 | Symbols: PSBT, PSBTC | Encodes photosystem II 5 kD protein subunit PSII-T. This is a plastid-encoded gene (PsbTc) which also has a nuclear-encoded paralog (PsbTn). | chrC:74082-74183 FORWARD
Blast Hits [nr] ref|NP_898074.1| photosystem II reaction center protein T [Synechococcus sp. WH 8102] gi|109150032|ref|YP_654177.1| photosystem II reaction center protein T [Synechococcus sp. CC9605] gi|62287455|sp|Q7U4T0.1|PSBT_SYNPX RecName: Full=Photosystem II reaction center protein T; Short=PSII-T gi|33633293|emb|CAE08498.1| photosystem II reaction center T protein [Synechococcus sp. WH 8102]
Blast Hits [sprot] PSBT_SYNPX (sp|Q7U4T0) Photosystem II reaction center protein T OS=Synechococcus sp. (strain WH8102) GN=psbT PE=3 SV=1
SynWH7803_0621 Gene product Photosystem II protein Psb27
InterPro IPR017488 Photosystem II protein Psb27; HMMTigr:TIGR03044 PS_II_psb27
Blast Hits [TAIR_pep] AT1G03600.1 | Symbols: | photosystem II family protein | chr1:898916-899440 FORWARD
Blast Hits [nr] ref|ZP_01123180.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805] gi|88788882|gb|EAR20037.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805]
Blast Hits [sprot] PS11_SYNY3 (sp|P74367) Photosystem II 11 kDa protein OS=Synechocystis sp. (strain PCC 6803) GN=slr1645 PE=1 SV=2
SynWH7803_0784 Gene product Photosystem II protein D1
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HMMTigr:TIGR01151 psbA
Blast Hits [TAIR_pep] ATCG00020.1 | Symbols: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE
Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_0790 Gene product Photosystem II protein D1
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000484 Photosynthetic reaction centre, L/M; superfamily:SSF81483 Bacterial photosystem II reaction centre, L and M subunits
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HAMAP:MF_01379 PSBA_MF_01379
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HMMTigr:TIGR01151 psbA: photosystem q(b) protein
Blast Hits [TAIR_pep] ATCG00020.1 | Symbols: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE
Blast Hits [nr] ref|ZP_01080882.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|87125349|ref|ZP_01081195.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167118|gb|EAQ68379.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167355|gb|EAQ68615.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917]
Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_1355 Gene product Photosystem II reaction centre Psb28 protein
InterPro IPR005610 Photosystem II protein Psb28, class 1; BlastProDom:PD012692 PSII_Psb28_class-1
InterPro IPR005610 Photosystem II protein Psb28, class 1; HMMPfam:PF03912 Psb28
InterPro IPR005610 Photosystem II protein Psb28, class 1; HMMTigr:TIGR03047 PS_II_psb28
Blast Hits [TAIR_pep] AT4G28660.1 | Symbols: PSB28 | PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) | chr4:14150008-14150933 FORWARD
Blast Hits [nr] ref|ZP_01123977.1| putative photosystem II reaction center Psb28 protein [Synechococcus sp. WH 7805] gi|88787455|gb|EAR18612.1| putative photosystem II reaction center Psb28 protein [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSB28_SYNS9 (sp|Q3AXG3) Photosystem II reaction center Psb28 protein OS=Synechococcus sp. (strain CC9902) GN=psb28 PE=3 SV=1
SynWH7803_1383 Gene product photosystem II protein Y
GO term Cellular Component: photosystem II (GO:0009523)
InterPro IPR009388 Photosystem II protein PsbY; HMMPfam:PF06298 PsbY
Blast Hits [sprot] PSBY_SYNR3 (sp|A5GU84) Photosystem II protein Y OS=Synechococcus sp. (strain RCC307) GN=psbY PE=3 SV=1
SynWH7803_1213 InterPro IPR017499 Photosystem II biogenesis protein Psp29; HMMPfam:PF11264 ThylakoidFormat
InterPro IPR017499 Photosystem II biogenesis protein Psp29; HMMTigr:TIGR03060 PS_II_psb29: photosystem II biogenesis pr
SynWH7803_1524 Gene product Photosystem II PsbP protein
InterPro IPR002683 Photosystem II oxygen evolving complex protein PsbP; HMMPfam:PF01789 PsbP
SynWH7803_1648 Gene product Photosystem II CP43 protein
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000932 Photosystem antenna protein-like; HMMPfam:PF00421 PSII
InterPro IPR005869 Photosystem II protein PsbC; HMMTigr:TIGR01153 psbC
Blast Hits [TAIR_pep] ATCG00280.1 | Symbols: PSBC | chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. | chrC:33720-35141 FORWARD
Blast Hits [pln_est] gb|GR302845|GR302845 WRIC_461 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to gi|60392964|sp|P11095|PSBC_HORVU Photosystem II 44 kDa reaction center protein (P6 protein) (CP43), mRNA sequence.
Blast Hits [sprot] PSBC_SYNY3 (sp|P09193) Photosystem II 44 kDa reaction center protein OS=Synechocystis sp. (strain PCC 6803) GN=psbC PE=1 SV=3
SynWH7803_1647 Gene product Photosystem II D2 protein
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000484 Photosynthetic reaction centre, L/M; superfamily:SSF81483 Bacterial photosystem II reaction centre, L and M subunits
InterPro IPR005868 Photosystem II reaction centre protein PsbD/D2; HAMAP:MF_01383 PSBD_MF_01383
InterPro IPR005868 Photosystem II reaction centre protein PsbD/D2; HMMTigr:TIGR01152 psbD: photosystem II D2 protein (photosystem
Blast Hits [nr] ref|NP_896770.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|33866762|ref|NP_898321.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|81572888|sp|Q7TTI2.1|PSBD_SYNPX RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein gi|33638895|emb|CAE07192.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|33639363|emb|CAE08747.1| photosystem II D2 protein [Synechococcus sp. WH 8102]
Blast Hits [sprot] PSBD_SYNPX (sp|Q7TTI2) Photosystem II D2 protein OS=Synechococcus sp. (strain WH8102) GN=psbD1 PE=3 SV=1
SynWH7803_1844 InterPro IPR003666 Photosystem I reaction centre protein PsaF, subunit III; Gene3D:G3DSA:1.10.8.110 PSI_PsaF
InterPro IPR003666 Photosystem I reaction centre protein PsaF, subunit III; HMMPfam:PF02507 PSI_PsaF
InterPro IPR003666 Photosystem I reaction centre protein PsaF, subunit III; superfamily:SSF81536 PSI_PsaF
Blast Hits [nr] ref|ZP_01123119.1| Photosystem I reaction center subunit III (PsaF) [Synechococcus sp. WH 7805] gi|88788821|gb|EAR19976.1| Photosystem I reaction center subunit III (PsaF) [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSAF_SYNP6 (sp|P31083) Photosystem I reaction center subunit III OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaF PE=1 SV=2
SynWH7803_1845 InterPro IPR016070 Cytochrome c oxidase subunit VIII/photosystem I reaction centre subunit IX; Gene3D:G3DSA:4.10.81.10 Cyt_c_oxidase_suVIII/PSI_suIX
SynWH7803_1977 InterPro IPR016003 Photosystem II, cytochrome c-550 precursor; HMMPIR:PIRSF005890 Phot_II_cyt_c550
InterPro IPR017851 Photosystem II, cytochrome c-550 precursor, PsbV; HMMTigr:TIGR03045 PS_II_C550
SynWH7803_1983 InterPro IPR017506 Photosystem II S4 domain protein; HMMTigr:TIGR03069 PS_II_S4
SynWH7803_2084 Gene product Photosystem II protein D1
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000484 Photosynthetic reaction centre, L/M; superfamily:SSF81483 Bacterial photosystem II reaction centre, L and M subunits
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HAMAP:MF_01379 PSBA_MF_01379
InterPro IPR005867 Photosystem II reaction centre protein PsbA/D1; HMMTigr:TIGR01151 psbA: photosystem q(b) protein
Blast Hits [TAIR_pep] ATCG00020.1 | Symbols: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE
Blast Hits [nr] ref|ZP_01080882.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|87125349|ref|ZP_01081195.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167118|gb|EAQ68379.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917] gi|86167355|gb|EAQ68615.1| Photosystem II reaction centre protein [Synechococcus sp. RS9917]
Blast Hits [pln_est] gb|GR302482|GR302482 WRIC_98 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem II thylakoid membrane protein, mRNA sequence.
SynWH7803_2130 Gene product Photosystem II PsbX protein
GO term Cellular Component: photosystem II (GO:0009523)
InterPro IPR009518 Photosystem II protein PsbX; HMMPfam:PF06596 PsbX
Blast Hits [nr] ref|ZP_01471067.1| photosystem II PsbX protein [Synechococcus sp. RS9916] gi|116069110|gb|EAU74862.1| photosystem II PsbX protein [Synechococcus sp. RS9916]
Blast Hits [sprot] PSBX_SYNPX (sp|Q7U9C4) Photosystem II reaction center X protein OS=Synechococcus sp. (strain WH8102) GN=psbX PE=3 SV=1
SynWH7803_2511 InterPro IPR017487 Photosystem II protein PsbQ, cyanobacteria; HMMTigr:TIGR03042 PS_II_psbQ_bact
SynWH7803_2203 Gene product photosystem II complex extrinsic protein precursor PsuB
GO term Biological Process: photosystem II stabilization (GO:0042549)
InterPro IPR010527 Photosystem II oxygen evolving complex protein PsbU; HMMPfam:PF06514 PsbU
Blast Hits [nr] ref|ZP_01122660.1| photosystem II complex extrinsic protein precursor PsuB [Synechococcus sp. WH 7805] gi|88788362|gb|EAR19517.1| photosystem II complex extrinsic protein precursor PsuB [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSBU_SYNS3 (sp|Q0I738) Photosystem II 12 kDa extrinsic protein OS=Synechococcus sp. (strain CC9311) GN=psbU PE=3 SV=1
SynWH7803_2239 Gene product Photosystem II D2 protein
GO term Biological Process: photosynthetic electron transport in photosystem II (GO:0009772)
InterPro IPR000484 Photosynthetic reaction centre, L/M; superfamily:SSF81483 Bacterial photosystem II reaction centre, L and M subunits
InterPro IPR005868 Photosystem II reaction centre protein PsbD/D2; HAMAP:MF_01383 PSBD_MF_01383
InterPro IPR005868 Photosystem II reaction centre protein PsbD/D2; HMMTigr:TIGR01152 psbD: photosystem II D2 protein (photosystem
Blast Hits [nr] ref|NP_896770.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|33866762|ref|NP_898321.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|81572888|sp|Q7TTI2.1|PSBD_SYNPX RecName: Full=Photosystem II D2 protein; Short=PSII D2 protein; AltName: Full=Photosystem Q(A) protein gi|33638895|emb|CAE07192.1| photosystem II D2 protein [Synechococcus sp. WH 8102] gi|33639363|emb|CAE08747.1| photosystem II D2 protein [Synechococcus sp. WH 8102]
Blast Hits [sprot] PSBD_SYNPX (sp|Q7TTI2) Photosystem II D2 protein OS=Synechococcus sp. (strain WH8102) GN=psbD1 PE=3 SV=1
SynWH7803_0198 Gene product photosystem I subunit VII
Blast Hits [nr] ref|ZP_01468913.1| photosystem I subunit VII [Synechococcus sp. BL107] gi|116065268|gb|EAU71026.1| photosystem I subunit VII [Synechococcus sp. BL107]
SynWH7803_0457 Gene product Photosystem I reaction center subunit II
Blast Hits [nr] ref|ZP_01123371.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp. WH 7805] gi|88787899|gb|EAR19055.1| photosystem I reaction center subunit II (PsaD) [Synechococcus sp. WH 7805]
Blast Hits [sprot] PSAD_SYNP6 (sp|P23076) Photosystem I reaction center subunit II OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaD PE=1 SV=3
SynWH7803_0667 Gene product photosystem I reaction center subunit XII
Blast Hits [nr] ref|YP_731181.1| photosystem I reaction center subunit XII [Synechococcus sp. CC9311] gi|113882617|gb|ABI47575.1| photosystem I reaction center subunit XII [Synechococcus sp. CC9311]
Blast Hits [sprot] PSAM_SYNS9 (sp|Q3AWT0) Photosystem I reaction center subunit XII OS=Synechococcus sp. (strain CC9902) GN=psaM PE=3 SV=2
SynWH7803_1211 GO term Molecular Function: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (GO:0045158)
SynWH7803_1640 Blast Hits [nr] ref|ZP_01124534.1| putative chaperon-like protein for quinone binding in photosystem II [Synechococcus sp. WH 7805] gi|88786967|gb|EAR18125.1| putative chaperon-like protein for quinone binding in photosystem II [Synechococcus sp. WH 7805]
SynWH7803_0937 Blast Hits [sprot] PSBS_ARATH (sp|Q9XF91) Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
SynWH7803_0392 Blast Hits [TAIR_pep] ATCG00340.1 | Symbols: PSAB | Encodes the D1 subunit of photosystem I and II reaction centers. | chrC:37375-39579 REVERSE
Blast Hits [pln_est] gb|GR302813|GR302813 WRIC_429 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis) and wheat Triticum aestivum cDNA 5' similar to photosystem I P700 apoprotein A2, mRNA sequence.
SynWH7803_0253 Blast Hits [TAIR_pep] ATCG00430.1 | Symbols: PSBG | Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | chrC:49257-49934 REVERSE
SynWH7803_1646 Blast Hits [TAIR_pep] ATCG00520.1 | Symbols: YCF4 | Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. | chrC:59772-60326 FORWARD
SynWH7803_1850 Blast Hits [TAIR_pep] AT4G03280.1 | Symbols: PETC, PGR1 | PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C); electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II | chr4:1440314-1441717 FORWARD
SynWH7803_2082 Blast Hits [TAIR_pep] ATCG00020.1 | Symbols: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE
SynWH7803_2246 Blast Hits [TAIR_pep] ATCG00360.1 | Symbols: YCF3 | Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I. | chrC:42584-43751 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
3.124225357

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