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Full-text search result: 783 genes by "cell" TXT SET

Synechococcus sp. WH 7803 (783 genes ) TXT SET

SynWH7803_1173 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
GO term Molecular Function: extracellular-glutamate-gated ion channel activity (GO:0005234)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
Blast Hits [TAIR_pep] AT3G51480.1 | Symbols: ATGLR3.6, GLR3.6 | ATGLR3.6 (GLUTAMATE RECEPTOR 3.6); intracellular ligand-gated ion channel | chr3:19101256-19104681 FORWARD
SynWH7803_1234 InterPro IPR006059 Bacterial extracellular solute-binding, family 1; HMMPfam:PF01547 SBP_bac_1
Blast Hits [TAIR_pep] AT3G61480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1339 (InterPro:IPR009771), WD40/YVTN repeat-like (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28350.2); Has 245 Blast hits to 227 proteins in 108 species: Archae - 0; Bacteria - 13; Metazoa - 104; Fungi - 64; Plants - 29; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | chr3:22749984-22756476 FORWARD
SynWH7803_1394 InterPro IPR007561 Cell division protein SepF; HMMPfam:PF04472 DUF552
Blast Hits [sprot] SEPF_NOSP7 (sp|B2J1K8) Cell division protein sepF OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=sepF PE=3 SV=1
SynWH7803_1418 GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMSmart:SM00062 PBPb
SynWH7803_1471 GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
SynWH7803_1518 InterPro IPR004474 Cell envelope-related transcriptional attenuator; HMMPfam:PF03816 LytR_cpsA_psr
InterPro IPR004474 Cell envelope-related transcriptional attenuator; HMMTigr:TIGR00350 lytR_cpsA_psr
SynWH7803_1551 InterPro IPR004474 Cell envelope-related transcriptional attenuator; HMMPfam:PF03816 LytR_cpsA_psr
InterPro IPR004474 Cell envelope-related transcriptional attenuator; HMMTigr:TIGR00350 lytR_cpsA_psr
SynWH7803_1571 InterPro IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain; HMMPfam:PF07698 7TM-7TMR_HD
SynWH7803_1608 InterPro IPR000914 Bacterial extracellular solute-binding protein, family 5; HMMPfam:PF00496 SBP_bac_5
SynWH7803_1652 InterPro IPR003399 Mammalian cell entry related; HMMPfam:PF02470 MCE
SynWH7803_1759 Gene product cell division protein FtsZ
Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Cellular Component: cytoplasm (GO:0005737)
GO term Cellular Component: protein complex (GO:0043234)
InterPro IPR000158 Cell division protein FtsZ, N-terminal; FPrintScan:PR00423 CELLDVISFTSZ
InterPro IPR000158 Cell division protein FtsZ, N-terminal; HMMTigr:TIGR00065 ftsZ
InterPro IPR020805 Cell division protein FtsZ, conserved site; PatternScan:PS01134 FTSZ_1
InterPro IPR020805 Cell division protein FtsZ, conserved site; PatternScan:PS01135 FTSZ_2
Blast Hits [nr] ref|ZP_01124674.1| cell division protein FtsZ [Synechococcus sp. WH 7805] gi|88787107|gb|EAR18265.1| cell division protein FtsZ [Synechococcus sp. WH 7805]
Blast Hits [sprot] FTSZ_ANASP (sp|P45482) Cell division protein ftsZ OS=Anabaena sp. (strain PCC 7120) GN=ftsZ PE=3 SV=2
SynWH7803_1808 InterPro IPR006059 Bacterial extracellular solute-binding, family 1; HMMPfam:PF01547 SBP_bac_1
SynWH7803_2029 Gene product Bacterial cell division membrane protein
Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: cell cycle (GO:0007049)
GO term Cellular Component: integral to membrane (GO:0016021)
InterPro IPR001182 Cell cycle protein; HMMPfam:PF01098 FTSW_RODA_SPOVE
InterPro IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site; PatternScan:PS00428 FTSW_RODA_SPOVE
Blast Hits [nr] ref|YP_731523.1| putative cell division protein FtsW [Synechococcus sp. CC9311] gi|113880740|gb|ABI45698.1| putative cell division protein FtsW [Synechococcus sp. CC9311]
Blast Hits [sprot] FTSW_SYNY3 (sp|P74180) Probable cell division protein ftsW OS=Synechocystis sp. (strain PCC 6803) GN=ftsW PE=3 SV=1
SynWH7803_2068 InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; HMMPfam:PF00553 CBM_2
InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; HMMSmart:SM00637 CBD_II
InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; ProfileScan:PS51173 CBM2
InterPro IPR008965 Carbohydrate-binding; superfamily:SSF49384 Cellul_bind
InterPro IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain; Gene3D:G3DSA:2.60.40.290 CBD_carb_bd
SynWH7803_2069 InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; HMMPfam:PF00553 CBM_2
InterPro IPR008965 Carbohydrate-binding; superfamily:SSF49384 Cellul_bind
InterPro IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain; Gene3D:G3DSA:2.60.40.290 CBD_carb_bd
Blast Hits [sprot] GUX_CELFI (sp|P07986) Exoglucanase/xylanase OS=Cellulomonas fimi GN=cex PE=1 SV=1
SynWH7803_2072 GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMSmart:SM00062 PBPb
SynWH7803_2513 InterPro IPR006059 Bacterial extracellular solute-binding, family 1; HMMPfam:PF01547 SBP_bac_1
SynWH7803_2297 InterPro IPR001828 Extracellular ligand-binding receptor; HMMPfam:PF01094 ANF_receptor
Blast Hits [sprot] LIVB7_BRUME (sp|Q8YBN1) Leu/Ile/Val-binding protein homolog 7 OS=Brucella melitensis GN=BMEII0868 PE=3 SV=2
SynWH7803_2345 InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; HMMPfam:PF00553 CBM_2
InterPro IPR001919 Cellulose-binding domain, family II, bacterial type; HMMSmart:SM00637 CBD_II
InterPro IPR008965 Carbohydrate-binding; superfamily:SSF49384 Cellul_bind
InterPro IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain; Gene3D:G3DSA:2.60.40.290 CBD_carb_bd
Blast Hits [sprot] GUX_CELFI (sp|P07986) Exoglucanase/xylanase OS=Cellulomonas fimi GN=cex PE=1 SV=1
SynWH7803_2346 GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
InterPro IPR001638 Extracellular solute-binding protein, family 3; HMMPfam:PF00497 SBP_bac_3
Blast Hits [TAIR_pep] AT2G32400.1 | Symbols: GLR5, GLR3.7, ATGLR3.7 | GLR5 (GLUTAMATE RECEPTOR 5); intracellular ligand-gated ion channel | chr2:13752665-13756233 REVERSE
SynWH7803_0011 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
InterPro IPR004390 Cell division transporter substrate-binding protein FtsY; HMMTigr:TIGR00064 ftsY
Blast Hits [sprot] FTSY_SYNY3 (sp|P73930) Cell division protein ftsY homolog OS=Synechocystis sp. (strain PCC 6803) GN=ftsY PE=3 SV=1
SynWH7803_0152 InterPro IPR006668 Magnesium transporter, MgtE intracellular domain; HMMPfam:PF03448 MgtE_N
SynWH7803_0172 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: cell morphogenesis (GO:0000902)
InterPro IPR004753 Cell shape determining protein MreB/Mrl; FPrintScan:PR01652 SHAPEPROTEIN
InterPro IPR004753 Cell shape determining protein MreB/Mrl; HMMPfam:PF06723 MreB_Mbl
InterPro IPR004753 Cell shape determining protein MreB/Mrl; HMMTigr:TIGR00904 mreB
Blast Hits [nr] ref|ZP_01123730.1| cell shape determining protein, MreB/Mrl family protein [Synechococcus sp. WH 7805] gi|88788258|gb|EAR19414.1| cell shape determining protein, MreB/Mrl family protein [Synechococcus sp. WH 7805]
SynWH7803_0175 InterPro IPR006059 Bacterial extracellular solute-binding, family 1; HMMPfam:PF01547 SBP_bac_1
Blast Hits [sprot] Y3748_BRUSU (sp|Q8FVS7) Putative binding protein BRA0748 OS=Brucella suis GN=BRA0748 PE=3 SV=1
SynWH7803_0257 InterPro IPR003399 Mammalian cell entry related; HMMPfam:PF02470 MCE
SynWH7803_0459 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: cell cycle (GO:0007049)
GO term Biological Process: regulation of cell shape (GO:0008360)
GO term Cellular Component: integral to membrane (GO:0016021)
InterPro IPR001182 Cell cycle protein; HMMPfam:PF01098 FTSW_RODA_SPOVE
Blast Hits [nr] ref|ZP_01123369.1| cell division protein possibly involved in shape determination [Synechococcus sp. WH 7805] gi|88787897|gb|EAR19053.1| cell division protein possibly involved in shape determination [Synechococcus sp. WH 7805]
SynWH7803_0563 Gene product Glycosyltransferase of family GT2; candidate processive Glycosyltransferase; possible cellulose synthase
Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
GO term Molecular Function: cellulose synthase activity (GO:0016759)
InterPro IPR003919 Cellulose synthase, subunit A; FPrintScan:PR01439 CELLSNTHASEA
InterPro NULL NULL; HMMPfam:PF03552 Cellulose_synt
Blast Hits [TAIR_pep] AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups | chr2:10471558-10473984 REVERSE
Blast Hits [sprot] BCSA_SALTI (sp|Q8Z291) Cellulose synthase catalytic subunit [UDP-forming] OS=Salmonella typhi GN=bcsA PE=3 SV=1
SynWH7803_0572 InterPro IPR007561 Cell division protein SepF; HMMPfam:PF04472 DUF552
Blast Hits [sprot] SEPF_SYNS9 (sp|Q3AZ61) Cell division protein sepF OS=Synechococcus sp. (strain CC9902) GN=sepF PE=3 SV=1
SynWH7803_1036 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
InterPro IPR002508 Cell wall hydrolase/autolysin, catalytic; HMMPfam:PF01520 Amidase_3
InterPro IPR002508 Cell wall hydrolase/autolysin, catalytic; HMMSmart:SM00646 Ami_3
Blast Hits [nr] ref|ZP_01123915.1| Cell wall hydrolase/autolysin [Synechococcus sp. WH 7805] gi|88787393|gb|EAR18550.1| Cell wall hydrolase/autolysin [Synechococcus sp. WH 7805]
SynWH7803_0019 Function Cell motility: Cell motility
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: type II protein secretion system complex (GO:0015627)
SynWH7803_0020 Function Cell motility: Cell motility
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0021 Function Cell motility: Cell motility
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0027 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0028 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell division (GO:0051301)
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Biological Process: regulation of cell shape (GO:0008360)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0036 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0051 Gene product Cell division protein FtsI / penicillin-binding protein 2
Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
SynWH7803_0052 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0053 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0060 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: sporulation resulting in formation of a cellular spore (GO:0030435)
SynWH7803_0061 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
Blast Hits [TAIR_pep] AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups | chr2:10471558-10473984 REVERSE
SynWH7803_0076 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0090 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0092 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0102 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
SynWH7803_0103 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0104 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226)
SynWH7803_0105 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0107 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0110 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0113 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0114 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0115 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0119 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0121 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0129 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0130 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0131 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0133 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
Blast Hits [pln_est] gb|FC514441|FC514441 CBFS4930.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS4930 5', mRNA sequence.
SynWH7803_0135 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0138 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0139 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0141 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Biological Process: intracellular protein transport (GO:0006886)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0157 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0173 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: regulation of cell shape (GO:0008360)
SynWH7803_0192 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0193 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0199 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0218 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0222 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0224 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0225 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0226 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0227 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0231 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0232 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0233 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0242 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0244 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0245 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0263 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0273 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0286 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0300 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_0304 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0314 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane (GO:0005886)
SynWH7803_0326 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: periplasmic space (GO:0042597)
SynWH7803_0330 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0399 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0401 Gene product Possible cell wall-associated hydrolase
Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0403 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0416 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0460 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_0473 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
Blast Hits [TAIR_pep] AT5G35690.1 | Symbols: | LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUG (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 335 Blast hits to 326 proteins in 115 species: Archae - 0; Bacteria - 24; Metazoa - 37; Fungi - 138; Plants - 58; Viruses - 2; Other Eukaryotes - 76 (source: NCBI BLink). | chr5:13865027-13868117 REVERSE
SynWH7803_0502 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0528 Gene product Cell division topological specificity factor
Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: cell division (GO:0051301)
Blast Hits [sprot] MINE_SYNS3 (sp|Q0ICQ3) Cell division topological specificity factor OS=Synechococcus sp. (strain CC9311) GN=minE PE=3 SV=1
SynWH7803_0529 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_0530 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_0532 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0543 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell wall macromolecule catabolic process (GO:0016998)
SynWH7803_0555 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0558 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: outer membrane (GO:0019867)
SynWH7803_0574 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0594 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell division (GO:0051301)
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Biological Process: regulation of cell shape (GO:0008360)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0608 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_0628 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0633 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
SynWH7803_0699 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0754 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_0808 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0892 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0936 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1020 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1028 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell division (GO:0051301)
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Biological Process: regulation of cell shape (GO:0008360)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1030 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell morphogenesis (GO:0000902)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1037 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1120 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell wall macromolecule catabolic process (GO:0016998)
SynWH7803_1149 Function Cell motility: Cell motility
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1153 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1160 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1164 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_1266 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1267 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_1282 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: sporulation resulting in formation of a cellular spore (GO:0030435)
SynWH7803_1316 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1320 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cell wall (GO:0005618)
SynWH7803_1330 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1334 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1340 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1341 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Cellular Component: peptidoglycan-based cell wall (GO:0009274)
SynWH7803_1361 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Biological Process: intracellular protein transport (GO:0006886)
GO term Cellular Component: type II protein secretion system complex (GO:0015627)
SynWH7803_1362 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Biological Process: intracellular protein transport (GO:0006886)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: type II protein secretion system complex (GO:0015627)
SynWH7803_1404 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1476 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1495 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1521 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1523 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1616 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1640 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1654 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1656 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1731 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: signal recognition particle (GO:0048500)
SynWH7803_1739 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1746 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1754 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cellular amino acid catabolic process (GO:0009063)
SynWH7803_1756 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cell wall (GO:0005618)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1767 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1777 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Cellular Component: peptidoglycan-based cell wall (GO:0009274)
SynWH7803_1795 Function Cell motility: Cell motility
SynWH7803_1796 Function Cell motility: Cell motility
SynWH7803_1799 Function Cell motility: Cell motility
SynWH7803_1801 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1822 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1840 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1841 Function Cell motility: Cell motility
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1848 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_1852 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1887 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1893 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1901 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1906 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1936 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1944 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_1955 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1956 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1958 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_1959 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: outer membrane (GO:0019867)
SynWH7803_1975 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Biological Process: sporulation resulting in formation of a cellular spore (GO:0030435)
SynWH7803_1984 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Biological Process: cell division (GO:0051301)
GO term Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273)
GO term Biological Process: regulation of cell shape (GO:0008360)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1997 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2051 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: cytoplasm (GO:0005737)
Blast Hits [TAIR_pep] AT5G50110.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glucose inhibited division protein (InterPro:IPR003682); Has 3963 Blast hits to 3963 proteins in 1297 species: Archae - 0; Bacteria - 2754; Metazoa - 2; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 1189 (source: NCBI BLink). | chr5:20373515-20376068 FORWARD
SynWH7803_2124 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_2127 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2132 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_2133 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_2162 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2167 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2199 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2219 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_2232 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2238 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2259 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2267 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
Blast Hits [nr] ref|ZP_05045457.1| cell division inhibitor [Cyanobium sp. PCC 7001] gi|197626207|gb|EDY38766.1| cell division inhibitor [Cyanobium sp. PCC 7001]
SynWH7803_2268 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2282 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2313 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2317 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2328 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2361 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2364 Function Cell motility: Cell motility
SynWH7803_2376 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
GO term Biological Process: intracellular protein transport (GO:0006886)
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2392 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_2393 Function Intracellular trafficking and secretion: Intracellular trafficking and secretion
SynWH7803_2420 Function Cell cycle control, mitosis and meiosis: Cell cycle control, mitosis and meiosis
SynWH7803_2435 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2436 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2442 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2463 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2467 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2475 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2508 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_2522 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2527 Function Cell wall/membrane biogenesis: Cell wall/membrane biogenesis
SynWH7803_0116 Gene product Conserved hypothetical protein with TPR repeat, possibly involved in cell envelope biogenesis
SynWH7803_0355 Gene product Cell division protein FtsH
GO term Cellular Component: membrane (GO:0016020)
Blast Hits [nr] ref|ZP_01123479.1| cell division protein FtsH2 [Synechococcus sp. WH 7805] gi|88788007|gb|EAR19163.1| cell division protein FtsH2 [Synechococcus sp. WH 7805]
Blast Hits [sprot] FTSH4_SYNY3 (sp|P72991) Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1
SynWH7803_1116 Gene product Cell division protein FtsH
GO term Cellular Component: membrane (GO:0016020)
Blast Hits [nr] ref|ZP_01124220.1| cell division protein FtsH4 [Synechococcus sp. WH 7805] gi|88787698|gb|EAR18855.1| cell division protein FtsH4 [Synechococcus sp. WH 7805]
Blast Hits [sprot] FTSH1_SYNY3 (sp|Q55700) Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1
SynWH7803_1216 Gene product Cell division protein FtsH
GO term Cellular Component: membrane (GO:0016020)
Blast Hits [sprot] FTSH1_SYNY3 (sp|Q55700) Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1
SynWH7803_1689 Gene product Cell division protein FtsH
GO term Cellular Component: membrane (GO:0016020)
Blast Hits [sprot] FTSH3_SYNY3 (sp|P73437) Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1
SynWH7803_1758 Gene product Cell division protein FtsQ
Blast Hits [sprot] FTSQ_STRCO (sp|P45518) Cell division protein ftsQ homolog OS=Streptomyces coelicolor GN=ftsQ PE=3 SV=2
SynWH7803_0003 GO term Cellular Component: cytoplasm (GO:0005737)
Blast Hits [pln_est] gb|CU714865|CU714865 CU714865 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA22YB13 5', mRNA sequence.
SynWH7803_0005 GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_0022 GO term Cellular Component: mitochondrion (GO:0005739)
SynWH7803_0024 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0033 GO term Cellular Component: acetyl-CoA carboxylase complex (GO:0009317)
SynWH7803_0058 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0059 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
Blast Hits [pln_est] gb|FC519776|FC519776 CBFU3432.fwd CBFU Thalassiosira pseudonana Iron limited cells (-Fe) Thalassiosira pseudonana cDNA clone CBFU3432 5', mRNA sequence.
SynWH7803_0062 GO term Cellular Component: DNA polymerase III complex (GO:0009360)
SynWH7803_0072 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0081 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
SynWH7803_0082 GO term Cellular Component: DNA polymerase III complex (GO:0009360)
SynWH7803_0087 GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0088 GO term Cellular Component: riboflavin synthase complex (GO:0009349)
SynWH7803_0108 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0118 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0128 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0137 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0142 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0143 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0147 GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_0149 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0150 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0156 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0161 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0177 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0194 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0032 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0198 GO term Cellular Component: thylakoid membrane (GO:0042651)
SynWH7803_0201 GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0203 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: voltage-gated potassium channel complex (GO:0008076)
SynWH7803_0204 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0207 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0210 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0219 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0223 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0240 GO term Cellular Component: cytoplasm (GO:0005737)
Blast Hits [pln_est] gb|CU697369|CU697369 CU697369 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA4YF16 5', mRNA sequence.
SynWH7803_0243 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0246 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0248 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem II (GO:0009523)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
GO term Cellular Component: plastid (GO:0009536)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_0249 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem II (GO:0009523)
GO term Cellular Component: plasma membrane-derived thylakoid photosystem II (GO:0030096)
GO term Cellular Component: plastid (GO:0009536)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_0260 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0264 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_0275 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_0280 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0290 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0297 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0306 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
SynWH7803_0307 GO term Cellular Component: 3-isopropylmalate dehydratase complex (GO:0009316)
SynWH7803_0312 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0319 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0324 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_0335 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0344 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_0353 GO term Cellular Component: extrinsic to membrane (GO:0019898)
GO term Cellular Component: oxygen evolving complex (GO:0009654)
SynWH7803_0361 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0362 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0363 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0365 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0368 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0372 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0378 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0379 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0380 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0381 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0391 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem I (GO:0009522)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_0392 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem I (GO:0009522)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_0395 GO term Cellular Component: membrane (GO:0016020)
Blast Hits [sprot] BEPE_BRUSU (sp|Q8G2M6) Efflux pump membrane transporter bepE OS=Brucella suis GN=bepE PE=1 SV=1
SynWH7803_0396 GO term Cellular Component: photosystem I reaction center (GO:0009538)
SynWH7803_0397 GO term Cellular Component: photosystem I (GO:0009522)
SynWH7803_0382 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0366 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_0247 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0287 GO term Cellular Component: photosystem II reaction center (GO:0009539)
Blast Hits [pln_est] gb|FC517518|FC517518 CBFU1731.fwd CBFU Thalassiosira pseudonana Iron limited cells (-Fe) Thalassiosira pseudonana cDNA clone CBFU1731 5', mRNA sequence.
SynWH7803_0310 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0313 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II (GO:0009523)
SynWH7803_0405 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0406 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0407 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0408 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0413 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0417 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: large ribosomal subunit (GO:0015934)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0419 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0420 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0422 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0423 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0425 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0426 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0427 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0428 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0431 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: large ribosomal subunit (GO:0015934)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0432 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0433 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0434 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0435 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0439 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0457 GO term Cellular Component: photosystem I reaction center (GO:0009538)
SynWH7803_0458 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0465 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0472 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0479 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0480 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0485 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0486 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0487 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0492 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0493 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0501 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0503 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0505 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0506 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0515 GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0518 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem (GO:0009521)
GO term Cellular Component: photosystem I (GO:0009522)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_0520 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem II (GO:0009523)
SynWH7803_0527 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0534 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: thylakoid membrane (GO:0042651)
SynWH7803_0535 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0540 GO term Cellular Component: photosystem I reaction center (GO:0009538)
GO term Cellular Component: plastid (GO:0009536)
SynWH7803_0544 GO term Biological Process: cellular aldehyde metabolic process (GO:0006081)
SynWH7803_0546 GO term Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331)
SynWH7803_0556 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0557 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0568 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0577 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0579 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0583 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0586 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_0587 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_0591 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0595 GO term Cellular Component: integral to membrane (GO:0016021)
Blast Hits [TAIR_pep] AT2G42700.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking during exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); Has 95 Blast hits to 92 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr2:17778464-17782034 FORWARD
SynWH7803_0410 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0412 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0418 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0421 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
Blast Hits [pln_est] gb|CU697209|CU697209 CU697209 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA4YM13 5', mRNA sequence.
SynWH7803_0424 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: large ribosomal subunit (GO:0015934)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0429 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: large ribosomal subunit (GO:0015934)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0430 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_0533 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0414 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_0517 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II reaction center (GO:0009539)
SynWH7803_0604 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0605 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0614 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0620 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0622 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0624 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0631 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0634 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0638 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0639 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0655 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0656 GO term Cellular Component: acetyl-CoA carboxylase complex (GO:0009317)
SynWH7803_0663 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0695 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0696 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0706 GO term Biological Process: cell redox homeostasis (GO:0045454)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0707 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0713 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0714 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0715 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0718 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0719 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0744 GO term Cellular Component: extracellular matrix (GO:0031012)
SynWH7803_0776 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0779 GO term Biological Process: cell wall macromolecule catabolic process (GO:0016998)
SynWH7803_0780 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0782 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0784 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_0798 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0667 GO term Cellular Component: plasma membrane-derived photosystem I (GO:0030094)
SynWH7803_0678 GO term Cellular Component: plastid (GO:0009536)
SynWH7803_0790 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_0802 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0834 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0861 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0876 GO term Cellular Component: cytoplasmic membrane-bounded vesicle (GO:0016023)
SynWH7803_0885 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_0893 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: outer membrane-bounded periplasmic space (GO:0030288)
SynWH7803_0899 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_0916 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0918 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0919 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_0923 GO term Cellular Component: intracellular (GO:0005622)
Blast Hits [TAIR_pep] AT5G02670.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase/ protein binding (TAIR:AT3G06560.1); Has 13 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:602971-604606 REVERSE
SynWH7803_0929 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_0978 GO term Biological Process: cell adhesion (GO:0007155)
SynWH7803_0980 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0981 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0989 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_0990 GO term Biological Process: cell adhesion (GO:0007155)
SynWH7803_0993 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1032 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1038 GO term Cellular Component: cyanelle (GO:0009842)
SynWH7803_1042 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1049 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1051 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1058 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1067 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1069 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
Blast Hits [pln_est] gb|FC528378|FC528378 CBPB4210.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB4210 5', mRNA sequence.
SynWH7803_1070 GO term Cellular Component: Holliday junction helicase complex (GO:0009379)
SynWH7803_1072 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1075 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1085 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1094 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1107 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1108 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1110 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1115 GO term Cellular Component: large ribosomal subunit (GO:0015934)
Blast Hits [pln_est] gb|CU716019|CU716019 CU716019 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA19YN03 5', mRNA sequence.
SynWH7803_1117 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1118 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1123 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1128 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1138 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1142 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1148 GO term Cellular Component: acetyl-CoA carboxylase complex (GO:0009317)
SynWH7803_1152 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1154 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1157 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1165 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1175 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1178 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1046 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1204 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1205 GO term Cellular Component: membrane (GO:0016020)
Blast Hits [TAIR_pep] AT5G04680.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04700.1); Has 351 Blast hits to 330 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 63; Fungi - 2; Plants - 240; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | chr5:1346314-1348850 REVERSE
SynWH7803_1217 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1220 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1222 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_1224 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem I (GO:0009522)
SynWH7803_1229 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1231 GO term Cellular Component: ATP-binding cassette (ABC) transporter complex (GO:0043190)
SynWH7803_1232 GO term Cellular Component: membrane (GO:0016020)
Blast Hits [sprot] YOR2_CALSR (sp|P40980) Putative ABC transporter permease protein ORF2 OS=Caldicellulosiruptor sp. (strain Rt8B.4) PE=3 SV=1
SynWH7803_1233 GO term Cellular Component: membrane (GO:0016020)
Blast Hits [sprot] Y3749_BRUSU (sp|Q8FVS6) Probable ABC transporter permease protein BRA0749 OS=Brucella suis GN=BRA0749 PE=3 SV=1
SynWH7803_1236 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1240 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1243 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1244 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1245 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1253 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1260 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1262 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1269 GO term Cellular Component: cytoplasm (GO:0005737)
GO term Cellular Component: excinuclease repair complex (GO:0009380)
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1277 GO term Biological Process: cellular metabolic process (GO:0044237)
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1288 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_1290 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1291 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
Blast Hits [pln_est] gb|FC534034|FC534034 CBPC3138.fwd CBPC Thalassiosira pseudonana Temperature limited early stationary phase whole cells Thalassiosira pseudonana cDNA clone CBPC3138 5', mRNA sequence.
SynWH7803_1299 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1303 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1310 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1314 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1318 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1328 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1329 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
GO term Cellular Component: small ribosomal subunit (GO:0015935)
SynWH7803_1333 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1342 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1346 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_1347 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1355 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: oxygen evolving complex (GO:0009654)
SynWH7803_1371 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1375 GO term Biological Process: cell redox homeostasis (GO:0045454)
Blast Hits [pln_est] gb|FC526064|FC526064 CBPB2601.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB2601 5', mRNA sequence.
SynWH7803_1381 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1382 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1383 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: photosystem II (GO:0009523)
SynWH7803_1386 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1292 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1237 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1211 GO term Cellular Component: cytochrome b6f complex (GO:0009512)
SynWH7803_1407 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
Blast Hits [sprot] CYSD_EMENI (sp|P50125) O-acetylhomoserine (thiol)-lyase OS=Emericella nidulans GN=cysD PE=2 SV=2
SynWH7803_1408 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1412 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1415 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1417 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1420 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1431 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1433 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1436 GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_1439 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1444 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1449 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1450 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1461 GO term Cellular Component: intracellular (GO:0005622)
Blast Hits [TAIR_pep] AT2G06040.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21900.1); Has 3642 Blast hits to 1885 proteins in 175 species: Archae - 0; Bacteria - 109; Metazoa - 2066; Fungi - 492; Plants - 697; Viruses - 0; Other Eukaryotes - 278 (source: NCBI BLink). | chr2:2352333-2355419 REVERSE
SynWH7803_1469 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1475 GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_1489 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1490 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1493 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1507 GO term Cellular Component: exodeoxyribonuclease V complex (GO:0009338)
SynWH7803_1516 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1517 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1524 GO term Cellular Component: extrinsic to membrane (GO:0019898)
GO term Cellular Component: oxygen evolving complex (GO:0009654)
SynWH7803_1539 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1546 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1553 GO term Biological Process: cellular biosynthetic process (GO:0044249)
SynWH7803_1558 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1560 GO term Cellular Component: phycobilisome (GO:0030089)
GO term Cellular Component: thylakoid membrane (GO:0042651)
SynWH7803_1585 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1589 GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_1593 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1592 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1595 GO term Cellular Component: cytochrome b6f complex (GO:0009512)
SynWH7803_1606 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_1609 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1615 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1617 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1618 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1621 GO term Cellular Component: integral to plasma membrane (GO:0005887)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1627 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1634 GO term Biological Process: cell redox homeostasis (GO:0045454)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1641 GO term Cellular Component: cytochrome b6f complex (GO:0009512)
SynWH7803_1646 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: thylakoid (GO:0009579)
SynWH7803_1648 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem (GO:0009521)
SynWH7803_1660 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1661 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1665 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1688 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
GO term Cellular Component: ornithine carbamoyltransferase complex (GO:0009348)
SynWH7803_1695 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1702 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1704 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1709 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1712 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1722 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1726 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1730 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1732 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1734 GO term Cellular Component: intracellular membrane-bounded organelle (GO:0043231)
SynWH7803_1738 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1744 GO term Biological Process: cell redox homeostasis (GO:0045454)
GO term Cellular Component: cytoplasm (GO:0005737)
Blast Hits [pln_est] dbj|ES790111|ES790111 070306ABLC001804CT (ABLC) Braeburn cell culture three days after subculture Malus x domestica cDNA clone ABLCC00180, mRNA sequence.
SynWH7803_1755 GO term Cellular Component: cellular_component (GO:0005575)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1761 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1765 GO term Biological Process: cellular amino acid biosynthetic process (GO:0008652)
SynWH7803_1766 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1770 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1774 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1776 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1779 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1783 GO term Biological Process: cell redox homeostasis (GO:0045454)
GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1785 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1786 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1788 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1794 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1647 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_1809 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1812 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1819 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1826 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1832 GO term Biological Process: cellular process (GO:0009987)
SynWH7803_1834 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1836 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1837 GO term Cellular Component: integral to membrane (GO:0016021)
Blast Hits [sprot] CVRA_SALHS (sp|B4TKD1) Cell volume regulation protein A OS=Salmonella heidelberg (strain SL476) GN=cvrA PE=3 SV=1
SynWH7803_1844 GO term Cellular Component: photosystem I reaction center (GO:0009538)
SynWH7803_1845 GO term Cellular Component: photosystem I (GO:0009522)
SynWH7803_1850 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: thylakoid membrane (GO:0042651)
SynWH7803_1851 GO term Cellular Component: integral to thylakoid membrane (GO:0031361)
SynWH7803_1856 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1863 GO term Biological Process: cellular protein metabolic process (GO:0044267)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1867 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1869 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1870 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1871 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1872 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: plasma membrane (GO:0005886)
SynWH7803_1873 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1883 GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_1890 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_1894 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1905 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1907 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1908 GO term Cellular Component: mitochondrion (GO:0005739)
SynWH7803_1927 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1935 GO term Cellular Component: plasma membrane (GO:0005886)
SynWH7803_1946 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1948 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1951 GO term Cellular Component: cytoplasm (GO:0005737)
GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_1957 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1963 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_1967 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1968 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_1977 GO term Cellular Component: thylakoid membrane (GO:0042651)
SynWH7803_1980 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1995 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1996 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_1998 GO term Biological Process: cellular protein metabolic process (GO:0044267)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_1999 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2000 GO term Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
GO term Cellular Component: proton-transporting two-sector ATPase complex (GO:0016469)
GO term Cellular Component: proton-transporting two-sector ATPase complex, catalytic domain (GO:0033178)
SynWH7803_1993 GO term Cellular Component: plastid (GO:0009536)
SynWH7803_1898 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2001 GO term Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
SynWH7803_2002 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: plastid (GO:0009536)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2004 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2005 GO term Biological Process: cellular process (GO:0009987)
SynWH7803_2007 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2016 GO term Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
SynWH7803_2017 GO term Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
GO term Cellular Component: proton-transporting two-sector ATPase complex (GO:0016469)
GO term Cellular Component: proton-transporting two-sector ATPase complex, catalytic domain (GO:0033178)
SynWH7803_2018 GO term Cellular Component: plasma membrane (GO:0005886)
GO term Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261)
SynWH7803_2019 GO term Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
SynWH7803_2020 GO term Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
SynWH7803_2022 GO term Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
SynWH7803_2023 GO term Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
SynWH7803_2025 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_2026 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_2027 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_2030 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2032 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2041 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2057 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2058 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2064 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
Blast Hits [pln_est] gb|CU715192|CU715192 CU715192 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA21YC01 5', mRNA sequence.
SynWH7803_2070 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2079 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2095 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2096 GO term Cellular Component: ATP-binding cassette (ABC) transporter complex (GO:0043190)
SynWH7803_2102 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2115 GO term Cellular Component: cell outer membrane (GO:0009279)
SynWH7803_2129 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2135 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2144 GO term Biological Process: cellular biosynthetic process (GO:0044249)
GO term Biological Process: cellular metabolic process (GO:0044237)
SynWH7803_2145 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2153 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2156 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_2166 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2172 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_2176 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2177 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2193 GO term Cellular Component: exodeoxyribonuclease VII complex (GO:0009318)
SynWH7803_2194 GO term Cellular Component: exodeoxyribonuclease VII complex (GO:0009318)
SynWH7803_2028 GO term Cellular Component: phycobilisome (GO:0030089)
SynWH7803_2021 GO term Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
GO term Cellular Component: proton-transporting two-sector ATPase complex, proton-transporting domain (GO:0033177)
SynWH7803_2084 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_2138 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2130 GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: photosystem II (GO:0009523)
SynWH7803_2404 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2409 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2413 GO term Cellular Component: glycine cleavage complex (GO:0005960)
GO term Cellular Component: mitochondrion (GO:0005739)
SynWH7803_2418 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2428 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2432 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2440 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2457 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2458 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2460 GO term Biological Process: cellular iron ion homeostasis (GO:0006879)
SynWH7803_2466 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: type I protein secretion system complex (GO:0030256)
SynWH7803_2472 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2473 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2478 GO term Cellular Component: molybdopterin synthase complex (GO:0019008)
SynWH7803_2480 GO term Cellular Component: integral to membrane (GO:0016021)
Blast Hits [sprot] CRNA_EMENI (sp|P22152) Nitrate transporter OS=Emericella nidulans GN=crnA PE=2 SV=2
SynWH7803_2493 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2499 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2500 GO term Cellular Component: polyphosphate kinase complex (GO:0009358)
SynWH7803_2502 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2506 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2517 GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2524 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2529 GO term Cellular Component: excinuclease repair complex (GO:0009380)
SynWH7803_2530 GO term Cellular Component: chromosome (GO:0005694)
SynWH7803_2533 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_2201 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2203 GO term Cellular Component: extrinsic to membrane (GO:0019898)
GO term Cellular Component: oxygen evolving complex (GO:0009654)
Blast Hits [pln_est] gb|FC521963|FC521963 CBFU5006.fwd CBFU Thalassiosira pseudonana Iron limited cells (-Fe) Thalassiosira pseudonana cDNA clone CBFU5006 5', mRNA sequence.
SynWH7803_2204 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2205 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_2206 GO term Cellular Component: cellular_component (GO:0005575)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2229 GO term Biological Process: cellular metabolic process (GO:0044237)
Blast Hits [nr] ref|ZP_01122632.1| putative cell division inhibitor [Synechococcus sp. WH 7805] gi|88788334|gb|EAR19489.1| putative cell division inhibitor [Synechococcus sp. WH 7805]
SynWH7803_2230 GO term Cellular Component: integral to membrane (GO:0016021)
Blast Hits [sprot] CVRA_PSEF5 (sp|Q4KJF1) Cell volume regulation protein A homolog OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=cvrA PE=3 SV=1
SynWH7803_2231 GO term Cellular Component: plasma membrane (GO:0005886)
SynWH7803_2235 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2236 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2242 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2245 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2252 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2260 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2263 GO term Cellular Component: integral to membrane (GO:0016021)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2270 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2272 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2273 GO term Cellular Component: plastid (GO:0009536)
SynWH7803_2284 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2290 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2292 GO term Biological Process: cellular carbohydrate metabolic process (GO:0044262)
GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2298 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2309 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2318 GO term Cellular Component: integral to membrane (GO:0016021)
SynWH7803_2322 GO term Biological Process: cell redox homeostasis (GO:0045454)
SynWH7803_2325 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2334 GO term Biological Process: cellular amino acid metabolic process (GO:0006520)
SynWH7803_2336 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2340 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2344 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2349 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2368 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2371 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2372 GO term Cellular Component: intracellular (GO:0005622)
SynWH7803_2373 GO term Cellular Component: intracellular (GO:0005622)
GO term Cellular Component: large ribosomal subunit (GO:0015934)
GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2374 GO term Cellular Component: ribosome (GO:0005840)
SynWH7803_2379 GO term Cellular Component: phosphopyruvate hydratase complex (GO:0000015)
SynWH7803_2394 GO term Biological Process: intracellular signaling cascade (GO:0007242)
SynWH7803_2396 GO term Cellular Component: cAMP-dependent protein kinase complex (GO:0005952)
GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2398 GO term Cellular Component: cytoplasm (GO:0005737)
SynWH7803_2239 GO term Cellular Component: light-harvesting complex (GO:0030076)
GO term Cellular Component: membrane (GO:0016020)
GO term Cellular Component: plasma membrane light-harvesting complex (GO:0030077)
SynWH7803_2291 GO term Cellular Component: membrane (GO:0016020)
SynWH7803_2033 Blast Hits [nr] ref|ZP_01122875.1| possible Extracellular link domain protein [Synechococcus sp. WH 7805] gi|88788577|gb|EAR19732.1| possible Extracellular link domain protein [Synechococcus sp. WH 7805]
SynWH7803_2106 Blast Hits [nr] ref|YP_001982178.1| oxidoreductase, short chain dehydrogenase/reductase family [Cellvibrio japonicus Ueda107] gi|190685869|gb|ACE83547.1| oxidoreductase, short chain dehydrogenase/reductase family [Cellvibrio japonicus Ueda107]
SynWH7803_0206 Blast Hits [sprot] EBH_STAAR (sp|Q6GGX3) Extracellular matrix-binding protein ebh OS=Staphylococcus aureus (strain MRSA252) GN=ebh PE=4 SV=1
SynWH7803_0588 Blast Hits [sprot] QUTD_EMENI (sp|P15325) Quinate permease OS=Emericella nidulans GN=qutD PE=3 SV=2
SynWH7803_0673 Blast Hits [sprot] HSP7M_EMENI (sp|Q5B0C0) Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1
SynWH7803_0750 Blast Hits [sprot] MCPT1_MOUSE (sp|P11034) Mast cell protease 1 OS=Mus musculus GN=Mcpt1 PE=1 SV=2
SynWH7803_0807 Blast Hits [sprot] CRCB1_BRUSU (sp|Q8FZV1) Protein crcB homolog 1 OS=Brucella suis GN=crcB1 PE=3 SV=1
SynWH7803_0838 Blast Hits [sprot] UVRC_CLOCE (sp|B8I8F2) UvrABC system protein C OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=uvrC PE=3 SV=1
SynWH7803_0889 Blast Hits [sprot] PNCB_BRUME (sp|Q8YEP2) Nicotinate phosphoribosyltransferase OS=Brucella melitensis GN=pncB PE=3 SV=1
SynWH7803_0913 Blast Hits [sprot] SLX1_EMENI (sp|Q5AU18) Structure-specific endonuclease subunit slx1 OS=Emericella nidulans GN=slx1 PE=3 SV=1
SynWH7803_1327 Blast Hits [sprot] SLAP1_CLOTH (sp|Q06852) Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=olpB PE=4 SV=2
SynWH7803_1675 Blast Hits [sprot] SCONB_EMENI (sp|Q00659) Sulfur metabolite repression control protein OS=Emericella nidulans GN=sconB PE=3 SV=2
SynWH7803_1787 Blast Hits [sprot] TCSA_EMENI (sp|Q9P896) Two-component system protein A OS=Emericella nidulans GN=tcsA PE=3 SV=2
SynWH7803_1817 Blast Hits [sprot] BCSC2_ACEXY (sp|O82861) Cellulose synthase operon protein C OS=Acetobacter xylinus GN=bcsC PE=3 SV=1
SynWH7803_1920 Blast Hits [TAIR_pep] AT1G61150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), CTLH, C-terminal to LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), CT11-RanBPM (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11110.1); Has 740 Blast hits to 708 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | chr1:22542928-22544355 FORWARD
Blast Hits [sprot] SPAP_STRMU (sp|P23504) Cell surface antigen I/II OS=Streptococcus mutans GN=spaP PE=1 SV=2
SynWH7803_2140 Blast Hits [sprot] CD5_HUMAN (sp|P06127) T-cell surface glycoprotein CD5 OS=Homo sapiens GN=CD5 PE=1 SV=1
SynWH7803_2271 Blast Hits [sprot] DIVK_BRUSU (sp|Q8FW53) Polar-differentiation response regulator divK OS=Brucella suis GN=divK PE=3 SV=1
SynWH7803_2491 Blast Hits [sprot] CARB_BRUSU (sp|Q8FZJ3) Carbamoyl-phosphate synthase large chain OS=Brucella suis GN=carB PE=3 SV=1
SynWH7803_0039 Blast Hits [pln_est] gb|CU699418|CU699418 CU699418 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA2YL14 5', mRNA sequence.
SynWH7803_0055 Blast Hits [pln_est] gb|FC528899|FC528899 CBPB4520.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB4520 5', mRNA sequence.
SynWH7803_0134 Blast Hits [pln_est] gb|FC513342|FC513342 CBFS4174.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS4174 5', mRNA sequence.
SynWH7803_0171 Blast Hits [pln_est] gb|FC511551|FC511551 CBFS2915.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS2915 5', mRNA sequence.
SynWH7803_0184 Blast Hits [pln_est] gb|FC509245|FC509245 CBFS1302.rev CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS1302 3', mRNA sequence.
SynWH7803_0367 Blast Hits [pln_est] gb|FN604802|FN604802 FN604802 Furcellaria lumbricalis Northern Ireland, Atlantic Ocean Furcellaria lumbricalis cDNA clone FL_IR_polyA_c3396, mRNA sequence.
SynWH7803_0450 Blast Hits [pln_est] gb|CU718823|CU718823 CU718823 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA11YO08 5', mRNA sequence.
SynWH7803_0514 Blast Hits [pln_est] gb|FC510967|FC510967 CBFS2516.fwd CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS2516 5', mRNA sequence.
SynWH7803_0709 Blast Hits [pln_est] gb|CU700262|CU700262 CU700262 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA28YG19 5', mRNA sequence.
SynWH7803_0743 Blast Hits [pln_est] gb|CU705116|CU705116 CU705116 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA16YF06 5', mRNA sequence.
SynWH7803_0770 Blast Hits [pln_est] gb|FC538274|FC538274 CBPC5816.fwd CBPC Thalassiosira pseudonana Temperature limited early stationary phase whole cells Thalassiosira pseudonana cDNA clone CBPC5816 5', mRNA sequence.
SynWH7803_0835 Blast Hits [pln_est] gb|FD870684|FD870684 CBHO15325.rev CBHO Volvox carteri f. nagariensis female Eve10 (asexuall, 2-4 cell stage, 32-128 cell stage, inversion) Volvox carteri f. nagariensis cDNA clone CBHO15325 3', mRNA sequence.
SynWH7803_0957 Blast Hits [pln_est] gb|FC524014|FC524014 CBPB1208.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB1208 5', mRNA sequence.
SynWH7803_0960 Blast Hits [pln_est] gb|FC527795|FC527795 CBPB3811.fwd CBPB Thalassiosira pseudonana RNA from carbon dioxide limited cells (-CO2) 8kb Thalassiosira pseudonana cDNA clone CBPB3811 5', mRNA sequence.
SynWH7803_1214 Blast Hits [pln_est] gb|FC521637|FC521637 CBFU4763.fwd CBFU Thalassiosira pseudonana Iron limited cells (-Fe) Thalassiosira pseudonana cDNA clone CBFU4763 5', mRNA sequence.
SynWH7803_1219 Blast Hits [pln_est] gb|FE968107|FE968107 PLATE_T3_045_D08_03DEC2004_058 Opium poppy elicitor-treated cell culture cDNA library Papaver somniferum cDNA, mRNA sequence.
SynWH7803_1435 Blast Hits [pln_est] gb|FC532194|FC532194 CBPC1906.fwd CBPC Thalassiosira pseudonana Temperature limited early stationary phase whole cells Thalassiosira pseudonana cDNA clone CBPC1906 5', mRNA sequence.
SynWH7803_1462 Blast Hits [pln_est] gb|FC515337|FC515337 CBFS5535.rev CBFS Thalassiosira pseudonana silicate limited cells (-Si) Thalassiosira pseudonana cDNA clone CBFS5535 3', mRNA sequence.
SynWH7803_1484 Blast Hits [pln_est] gb|CU699712|CU699712 CU699712 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA29YO07 5', mRNA sequence.
SynWH7803_1721 Blast Hits [pln_est] gb|FC516302|FC516302 CBFT429.rev CBFT Thalassiosira pseudonana nitrate limited cells (-NO3) Thalassiosira pseudonana cDNA clone CBFT429 3', mRNA sequence.
SynWH7803_1745 Blast Hits [pln_est] gb|CU716789|CU716789 CU716789 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA17YK03 5', mRNA sequence.
SynWH7803_2008 Blast Hits [pln_est] gb|CU712956|CU712956 CU712956 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA27YG18 5', mRNA sequence.
SynWH7803_2014 Blast Hits [pln_est] gb|BF650584|BF650584 NF090G06EC1F1050 Elicited cell culture Medicago truncatula cDNA clone NF090G06EC 5', mRNA sequence.
SynWH7803_2044 Blast Hits [pln_est] gb|CU705469|CU705469 CU705469 Phaeodactylum tricornutum 48 hour dark-adapted cells exposed to blue light for 1 hour Phaeodactylum tricornutum cDNA clone KS0ARA15YD10 5', mRNA sequence.
SynWH7803_2090 Blast Hits [pln_est] gb|FD870230|FD870230 CBHO15000.fwd CBHO Volvox carteri f. nagariensis female Eve10 (asexuall, 2-4 cell stage, 32-128 cell stage, inversion) Volvox carteri f. nagariensis cDNA clone CBHO15000 5', mRNA sequence.
SynWH7803_2136 Blast Hits [pln_est] gb|FE967361|FE967361 PLATE_T3_037_D09_01DEC2004_073 Opium poppy elicitor-treated cell culture cDNA library Papaver somniferum cDNA, mRNA sequence.
SynWH7803_2320 Blast Hits [pln_est] gb|FC532724|FC532724 CBPC2259.fwd CBPC Thalassiosira pseudonana Temperature limited early stationary phase whole cells Thalassiosira pseudonana cDNA clone CBPC2259 5', mRNA sequence.
SynWH7803_2358 Blast Hits [pln_est] gb|CB816891|CB816891 d1d12pz.r1 Plumbago zeylanica sperm cell (Sua) cDNA library Plumbago zeylanica cDNA clone d1d12pz 5', mRNA sequence.
SynWH7803_2407 Blast Hits [pln_est] gb|FC508482|FC508482 CBFN426.fwd CBFN Thalassiosira pseudonana Temperature limited early stationary phase whole cells (M) Thalassiosira pseudonana cDNA clone CBFN426 5', mRNA sequence.
SynWH7803_2451 Blast Hits [pln_est] gb|FC536151|FC536151 CBPC4519.fwd CBPC Thalassiosira pseudonana Temperature limited early stationary phase whole cells Thalassiosira pseudonana cDNA clone CBPC4519 5', mRNA sequence.
SynWH7803_2455 Blast Hits [pln_est] gb|CU711673|CU711673 CU711673 Phaeodactylum tricornutum Aerated culture of predominantly triradiate cells Phaeodactylum tricornutum cDNA clone KS0ASA2YO21 5', mRNA sequence.
SynWH7803_2494 Blast Hits [pln_est] gb|FD875280|FD875280 CBHO18433.fwd CBHO Volvox carteri f. nagariensis female Eve10 (asexuall, 2-4 cell stage, 32-128 cell stage, inversion) Volvox carteri f. nagariensis cDNA clone CBHO18433 5', mRNA sequence.
SynWH7803_0017 Blast Hits [TAIR_pep] AT5G39940.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HI0933-like protein (InterPro:IPR004792); Has 2776 Blast hits to 2776 proteins in 871 species: Archae - 18; Bacteria - 1933; Metazoa - 0; Fungi - 2; Plants - 19; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). | chr5:15987649-15990561 FORWARD
SynWH7803_0148 Blast Hits [TAIR_pep] AT5G57770.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828, plant (InterPro:IPR008546); Has 104 Blast hits to 104 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:23401094-23403112 REVERSE
SynWH7803_0188 Blast Hits [TAIR_pep] AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | ATGLR1.2; intracellular ligand-gated ion channel | chr5:19616244-19619246 FORWARD
SynWH7803_0298 Blast Hits [TAIR_pep] AT3G02410.2 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018); BEST Arabidopsis thaliana protein match is: ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 6626 Blast hits to 6602 proteins in 841 species: Archae - 25; Bacteria - 2529; Metazoa - 2527; Fungi - 403; Plants - 105; Viruses - 5; Other Eukaryotes - 1032 (source: NCBI BLink). | chr3:492118-494675 REVERSE
SynWH7803_0323 Blast Hits [TAIR_pep] AT4G17616.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G03100.1); Has 497 Blast hits to 452 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 0; Plants - 485; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr4:9819608-9821632 FORWARD
SynWH7803_0332 Blast Hits [TAIR_pep] AT5G63520.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FIST domain, N-terminal (InterPro:IPR013702); Has 96 Blast hits to 96 proteins in 46 species: Archae - 0; Bacteria - 72; Metazoa - 6; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr5:25426300-25429093 REVERSE
SynWH7803_0350 Blast Hits [TAIR_pep] AT4G22850.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1); Has 1331 Blast hits to 1328 proteins in 349 species: Archae - 4; Bacteria - 600; Metazoa - 103; Fungi - 64; Plants - 162; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink). | chr4:11994194-11995941 FORWARD
SynWH7803_0359 Blast Hits [TAIR_pep] AT1G19130.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 778 Blast hits to 778 proteins in 280 species: Archae - 8; Bacteria - 513; Metazoa - 2; Fungi - 16; Plants - 22; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). | chr1:6609545-6610555 REVERSE
SynWH7803_0526 Blast Hits [TAIR_pep] AT1G32180.1 | Symbols: ATCSLD6, CSLD6 | ATCSLD6; cellulose synthase/ transferase, transferring glycosyl groups | chr1:11586516-11589651 REVERSE
SynWH7803_0723 Blast Hits [TAIR_pep] AT2G20010.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25800.1); Has 93 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr2:8637977-8640830 REVERSE
SynWH7803_0740 Blast Hits [TAIR_pep] AT1G06630.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G60040.1). | chr1:2028071-2030344 FORWARD
SynWH7803_0812 Blast Hits [TAIR_pep] AT3G44880.1 | Symbols: ACD1, LLS1, PAO | ACD1 (ACCELERATED CELL DEATH 1); iron-sulfur cluster binding / pheophorbide a oxygenase | chr3:16383858-16386204 FORWARD
SynWH7803_1101 Blast Hits [TAIR_pep] AT3G61290.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61280.1); Has 450 Blast hits to 447 proteins in 91 species: Archae - 0; Bacteria - 32; Metazoa - 199; Fungi - 79; Plants - 112; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink). | chr3:22684407-22686772 FORWARD
SynWH7803_1172 Blast Hits [TAIR_pep] AT5G03550.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT2G42460.1); Has 63 Blast hits to 57 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:895813-896145 REVERSE
SynWH7803_1189 Blast Hits [TAIR_pep] AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | ATGLR2.9; intracellular ligand-gated ion channel | chr2:12501092-12504912 REVERSE
SynWH7803_1193 Blast Hits [TAIR_pep] AT1G55800.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATP binding / nucleotide binding / phenylalanine-tRNA ligase (TAIR:AT1G55790.1); Has 134 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 34; Fungi - 27; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:20856922-20858235 REVERSE
SynWH7803_1372 Blast Hits [TAIR_pep] AT3G55840.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Hs1pro-1, C-terminal (InterPro:IPR009743), Hs1pro-1, N-terminal (InterPro:IPR009869); BEST Arabidopsis thaliana protein match is: HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) (TAIR:AT2G40000.1); Has 43 Blast hits to 43 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:20717530-20718816 REVERSE
SynWH7803_1399 Blast Hits [TAIR_pep] AT1G67020.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 53 Blast hits to 53 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25011008-25012987 REVERSE
SynWH7803_1423 Blast Hits [TAIR_pep] AT3G02950.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tho complex subunit 7 (InterPro:IPR018018), Tho complex subunit 7/Mft1p (InterPro:IPR008501); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16790.1); Has 2049 Blast hits to 1787 proteins in 271 species: Archae - 31; Bacteria - 158; Metazoa - 1041; Fungi - 168; Plants - 75; Viruses - 26; Other Eukaryotes - 550 (source: NCBI BLink). | chr3:665631-666439 REVERSE
SynWH7803_1447 Blast Hits [TAIR_pep] AT1G71900.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT1G34470.1); Has 875 Blast hits to 858 proteins in 150 species: Archae - 0; Bacteria - 55; Metazoa - 361; Fungi - 238; Plants - 146; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr1:27061754-27064053 FORWARD
SynWH7803_1457 Blast Hits [TAIR_pep] AT3G02410.1 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018); BEST Arabidopsis thaliana protein match is: ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 6563 Blast hits to 6539 proteins in 837 species: Archae - 25; Bacteria - 2499; Metazoa - 2507; Fungi - 392; Plants - 105; Viruses - 5; Other Eukaryotes - 1030 (source: NCBI BLink). | chr3:492118-494877 REVERSE
SynWH7803_1491 Blast Hits [TAIR_pep] AT3G51140.1 | Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: CDF1 (CELL GROWTH DEFECT FACTOR 1) (TAIR:AT5G23040.1); Has 133 Blast hits to 133 proteins in 42 species: Archae - 0; Bacteria - 60; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr3:18998182-18999437 FORWARD
SynWH7803_1520 Blast Hits [TAIR_pep] AT5G25080.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sas10/Utp3/C1D (InterPro:IPR007146), Exosome-associated factor Rrp47/DNA strand repair C1D (InterPro:IPR011082); Has 137 Blast hits to 137 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 42; Plants - 16; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:8643782-8646306 FORWARD
SynWH7803_1693 Blast Hits [TAIR_pep] AT1G55325.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAP240 (InterPro:IPR009401); Has 190 Blast hits to 182 proteins in 65 species: Archae - 0; Bacteria - 45; Metazoa - 113; Fungi - 3; Plants - 23; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:20637594-20646875 FORWARD
SynWH7803_1700 Blast Hits [TAIR_pep] AT3G29580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT3G58210.1); Has 220 Blast hits to 198 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr3:11394675-11395871 REVERSE
SynWH7803_1839 Blast Hits [TAIR_pep] AT3G03140.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G21295.1); Has 422 Blast hits to 270 proteins in 77 species: Archae - 0; Bacteria - 12; Metazoa - 232; Fungi - 62; Plants - 66; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). | chr3:724348-727093 FORWARD
SynWH7803_1857 Blast Hits [TAIR_pep] AT1G67020.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 53 Blast hits to 53 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25011008-25012987 REVERSE
SynWH7803_1875 Blast Hits [TAIR_pep] AT5G49720.1 | Symbols: ATGH9A1, DEC, KOR, RSW2, IRX2, KOR1 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds | chr5:20197765-20200168 REVERSE
SynWH7803_2011 Blast Hits [TAIR_pep] AT3G43260.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: PBS lyase HEAT-like repeat-containing protein (TAIR:AT3G62530.1); Has 43 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr3:15219454-15221723 FORWARD
SynWH7803_2330 Blast Hits [TAIR_pep] AT1G60110.1 | Symbols: | EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: jacalin lectin family protein (TAIR:AT1G60130.1); Has 1392 Blast hits to 461 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1390; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:22168502-22170649 FORWARD
SynWH7803_2474 Blast Hits [TAIR_pep] AT3G55830.1 | Symbols: EPC1 | EPC1 (ECTOPICALLY PARTING CELLS); UDP-glucosyltransferase/ transferase, transferring glycosyl groups | chr3:20715101-20717133 FORWARD
SynWH7803_0900 Blast Hits [nr] ref|YP_003328004.1| cell divisionFtsK/SpoIIIE [Xylanimonas cellulosilytica DSM 15894] gi|269306897|gb|ACZ32446.1| cell divisionFtsK/SpoIIIE [Xylanimonas cellulosilytica DSM 15894]

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
4.301735117

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