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Full-text search result: 245 genes by "Rod" TXT SET

Synechococcus sp. WH 7803 (245 genes ) TXT SET

SynWH7803_0058 InterPro NULL NULL; BlastProDom:PD002389 PD002389
SynWH7803_0073 Gene product dihydrodipicolinate synthase
GO term Molecular Function: dihydrodipicolinate synthase activity (GO:0008840)
InterPro IPR002220 Dihydrodipicolinate synthetase; FPrintScan:PR00146 DHPICSNTHASE
InterPro IPR002220 Dihydrodipicolinate synthetase; HMMPanther:PTHR12128 DHDPS
InterPro IPR002220 Dihydrodipicolinate synthetase; HMMPfam:PF00701 DHDPS
InterPro IPR005263 Dihydrodipicolinate synthase subfamily; HMMTigr:TIGR00674 dapA
InterPro IPR020624 Dihydrodipicolinate synthetase, conserved site; PatternScan:PS00665 DHDPS_1
InterPro IPR020625 Dihydrodipicolinate synthetase, active site; PatternScan:PS00666 DHDPS_2
Blast Hits [TAIR_pep] AT3G60880.2 | Symbols: DHDPS, DHDPS1 | dihydrodipicolinate synthase 1 (DHDPS1) (DHDPS) (DHPS1) | chr3:22495086-22496542 FORWARD
Blast Hits [nr] ref|ZP_01125462.1| dihydrodipicolinate synthase [Synechococcus sp. WH 7805] gi|88786147|gb|EAR17309.1| dihydrodipicolinate synthase [Synechococcus sp. WH 7805]
Blast Hits [sprot] DAPA_SYNS3 (sp|Q0IE16) Dihydrodipicolinate synthase OS=Synechococcus sp. (strain CC9311) GN=dapA PE=3 SV=1
SynWH7803_0087 InterPro IPR002644 Photosystem II reaction centre protein PsbZ; BlastProDom:PD004770 PSII_PsbZ
SynWH7803_0103 InterPro IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase related; BlastProDom:PD001462 dTDP_sugar_isom
SynWH7803_0173 Gene product Rod shape-determining protein
InterPro IPR007221 Rod shape-determining protein MreC; HMMPfam:PF04085 MreC
Blast Hits [nr] ref|ZP_01123729.1| putative rod shape-determining protein [Synechococcus sp. WH 7805] gi|88788257|gb|EAR19413.1| putative rod shape-determining protein [Synechococcus sp. WH 7805]
Blast Hits [sprot] MREC_BACSU (sp|Q01466) Rod shape-determining protein mreC OS=Bacillus subtilis GN=mreC PE=3 SV=3
SynWH7803_0185 InterPro IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal; BlastProDom:PD005323 DNA_helicase_Holl-junc_RuvB_C
SynWH7803_0184 InterPro IPR000037 SsrA-binding protein; BlastProDom:PD004488 Q3B0J2_9SYNE_Q3B0J2;
SynWH7803_0197 InterPro NULL NULL; BlastProDom:PD000887 ACP_PROMA_Q7V9R0;
SynWH7803_0246 InterPro NULL NULL; BlastProDom:PD003776 PD003776
SynWH7803_0254 Function Energy production and conversion: Energy production and conversion
InterPro IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit; BlastProDom:PD001581 NADH_UbQ_OxRdtase_30kDa_su
SynWH7803_0312 InterPro IPR003398 Photosystem II protein PsbN; BlastProDom:PD005510 PSII_PsbN
SynWH7803_0396 InterPro IPR003757 Photosystem I reaction centre, subunit XI PsaL; BlastProDom:PD005947 PSI_PsaL
SynWH7803_0247 InterPro IPR003372 Photosystem II protein PsbL; BlastProDom:PD005113 Q3H8M0_TRIER_Q3H8M0;
SynWH7803_0313 InterPro IPR001056 Photosystem II phosphoprotein PsbH; BlastProDom:PD003584 PSBH_SYNPX_Q7U9I7;
SynWH7803_0411 InterPro IPR011260 RNA polymerase, alpha subunit, C-terminal; BlastProDom:PD001179 RNAP_asu_C
SynWH7803_0425 InterPro IPR000266 Ribosomal protein S17; BlastProDom:PD001295 Ribosomal_S17
SynWH7803_0459 Gene product Rod shape-determining protein
Gene symbol rodA
InterPro IPR001182 Cell cycle protein; HMMPfam:PF01098 FTSW_RODA_SPOVE
InterPro IPR011923 Rod shape-determining protein RodA; HMMTigr:TIGR02210 rodA_shape
Blast Hits [sprot] RODA_HAEIN (sp|P44468) Rod shape-determining protein rodA OS=Haemophilus influenzae GN=mrdB PE=3 SV=1
SynWH7803_0487 InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
SynWH7803_0490 Gene product Conserved hypothetical protein in phycobilisome rod gene region
InterPro IPR020325 Uncharacterised protein family 16.1kDa; BlastProDom:PD085502 Uncharacterised_16.1kDa
SynWH7803_0501 InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
Blast Hits [sprot] PYR1_SYNP2 (sp|Q05237) Phycobilisome 32.3 kDa linker polypeptide, phycocyanin-associated, rod OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cpcC PE=1 SV=1
SynWH7803_0502 InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
SynWH7803_0503 InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
Blast Hits [sprot] PYR1_FREDI (sp|P18542) Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod OS=Fremyella diplosiphon GN=cpeC PE=1 SV=3
SynWH7803_0505 Gene product Phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5)
InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
Blast Hits [nr] ref|NP_898088.1| phycobilisome rod-core linker polypeptide (L-RC 28.5) [Synechococcus sp. WH 8102] gi|33633307|emb|CAE08512.1| possible phycobilisome rod-core linker polypeptide (L-RC 28.5) [Synechococcus sp. WH 8102]
Blast Hits [sprot] PYG1_SYNP2 (sp|Q05238) Phycobilisome rod-core linker polypeptide cpcG OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cpcG PE=1 SV=3
SynWH7803_0540 InterPro IPR003375 Photosystem I reaction centre subunit IV/PsaE; BlastProDom:PD004772 PSI_PsaE
SynWH7803_0549 InterPro IPR001874 Dehydroquinase, class II; BlastProDom:PD004527 DHquinase_II
SynWH7803_0579 InterPro NULL NULL; BlastProDom:PD006086 PD006086
SynWH7803_0592 InterPro IPR002696 Protein of unknown function DUF37; BlastProDom:PD004225 DUF37
SynWH7803_0414 InterPro NULL NULL; BlastProDom:PD002101 Q3AW73_9SYNE_Q3AW73;
SynWH7803_0601 InterPro IPR001075 NIF system FeS cluster assembly, NifU, C-terminal; BlastProDom:PD002830 NIF_FeS_clus_asmbl_NifU_C
Blast Hits [pln_est] emb|AU295477|AU295477 AU295477 Closterium peracerosum-strigosum-littorale complex sexual reproductive stage Closterium peracerosum-strigosum-littorale complex cDNA clone 4-02_G07, mRNA sequence.
SynWH7803_0682 InterPro IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; BlastProDom:PD012510 EutN_CcmL
SynWH7803_0683 InterPro IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; BlastProDom:PD012510 EutN_CcmL
SynWH7803_0684 InterPro NULL NULL; BlastProDom:PD003442 PD003442
SynWH7803_0746 InterPro IPR002496 Phosphoribosyl-AMP cyclohydrolase; BlastProDom:PD002610 PRA_CycHdrlase
SynWH7803_0755 InterPro IPR000257 Uroporphyrinogen decarboxylase (URO-D); PatternScan:PS00906 UROD_1
InterPro IPR000257 Uroporphyrinogen decarboxylase (URO-D); PatternScan:PS00907 UROD_2
SynWH7803_0677 InterPro NULL NULL; BlastProDom:PD003442 CCMK_PROMA_P0A328;
SynWH7803_0678 InterPro IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal; Gene3D:G3DSA:3.30.70.150 no description
InterPro IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal; superfamily:SSF54966 RuBisCO, large subunit, small (N-terminal) domain
SynWH7803_0845 InterPro IPR000518 Metallothionein, family 14, prokaryote; BlastProDom:PD019076 Metallthion_Pro
SynWH7803_0947 InterPro IPR001398 Macrophage migration inhibitory factor; BlastProDom:PD004816 Macrophage_inhib_fac
SynWH7803_1069 InterPro NULL NULL; BlastProDom:PD157043 PD157043
SynWH7803_1141 InterPro IPR003850 Phosphoribosylformylglycinamidine synthetase, PurS subunit; BlastProDom:PD010362 FGAM_PurS
SynWH7803_1282 InterPro NULL NULL; BlastProDom:PD191273 PD191273
SynWH7803_1290 InterPro IPR005121 Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; Gene3D:G3DSA:3.30.70.380 Fdx_AntiC_bd
InterPro IPR005121 Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; HMMPfam:PF03147 FDX-ACB
InterPro IPR005121 Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; HMMSmart:SM00896 FDX-ACB
InterPro IPR005121 Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; ProfileScan:PS51447 FDX_ACB
InterPro IPR005121 Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; superfamily:SSF54991 Fdx_AntiC_bd
SynWH7803_1318 InterPro IPR006194 Glycyl-tRNA synthetase, class II, heterodimeric; ProfileScan:PS50861 AA_TRNA_LIGASE_II_GLYAB
SynWH7803_1319 InterPro IPR005117 Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; HMMPfam:PF03460 NIR_SIR_ferr
InterPro IPR005117 Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; superfamily:SSF55124 NiR_SiRalpha_1/3
SynWH7803_1355 InterPro IPR005610 Photosystem II protein Psb28, class 1; BlastProDom:PD012692 PSII_Psb28_class-1
SynWH7803_1292 InterPro IPR001648 Ribosomal protein S18; BlastProDom:PD002239 Q3AJZ1_9SYNE_Q3AJZ1;
SynWH7803_1408 InterPro IPR005697 Homoserine O-succinyltransferase; BlastProDom:PD037892 Homserine_suc_trans
SynWH7803_1426 InterPro IPR009631 Protein of unknown function DUF1230; BlastProDom:PD016444 DUF1230
SynWH7803_1439 Gene product dihydrodipicolinate reductase
GO term Molecular Function: dihydrodipicolinate reductase activity (GO:0008839)
InterPro IPR000846 Dihydrodipicolinate reductase; HMMPfam:PF01113 DapB_N
InterPro IPR000846 Dihydrodipicolinate reductase; HMMPfam:PF05173 DapB_C
InterPro IPR000846 Dihydrodipicolinate reductase; PatternScan:PS01298 DAPB
InterPro IPR011770 Dihydrodipicolinate reductase, bacterial/plant; HMMPanther:PTHR20836 DapB_bac/pln
InterPro IPR011770 Dihydrodipicolinate reductase, bacterial/plant; HMMTigr:TIGR00036 dapB
Blast Hits [TAIR_pep] AT5G52100.1 | Symbols: crr1 | crr1 (chlororespiration reduction 1); dihydrodipicolinate reductase | chr5:21170203-21172107 FORWARD
Blast Hits [nr] ref|YP_730430.1| dihydrodipicolinate reductase [Synechococcus sp. CC9311] gi|113880464|gb|ABI45422.1| dihydrodipicolinate reductase [Synechococcus sp. CC9311]
Blast Hits [sprot] DAPB_PROMM (sp|Q7V7D4) Dihydrodipicolinate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapB PE=3 SV=1
SynWH7803_1644 InterPro NULL NULL; BlastProDom:PD002844 PD002844
SynWH7803_1646 InterPro IPR003359 Photosystem I assembly protein Ycf4; BlastProDom:PD003698 PSI_Ycf4
SynWH7803_1770 InterPro IPR006194 Glycyl-tRNA synthetase, class II, heterodimeric; ProfileScan:PS50861 AA_TRNA_LIGASE_II_GLYAB
SynWH7803_1845 InterPro IPR002615 Photosystem I reaction centre, subunit IX / PsaJ; BlastProDom:PD004198 PSI_PsaJ
SynWH7803_1896 InterPro IPR008243 Chorismate mutase, AroH class; BlastProDom:PD031888 Chorismate_mutase_AroH
SynWH7803_1968 InterPro IPR001684 Ribosomal protein L27; BlastProDom:PD003114 Ribosomal_L27
SynWH7803_1993 InterPro IPR004207 Ferredoxin thioredoxin reductase, alpha chain; BlastProDom:PD015034 Q3AZJ4_9SYNE_Q3AZJ4;
SynWH7803_1898 InterPro IPR000271 Ribosomal protein L34; BlastProDom:PD003101 Q3AV42_9SYNE_Q3AV42;
SynWH7803_2001 Function Energy production and conversion: Energy production and conversion
InterPro IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal; BlastProDom:PD000944 ATPase_F1-cplx_dsu/esu
SynWH7803_2002 InterPro IPR006924 Ribosomal protein PSRP-3/Ycf65; BlastProDom:PD015453 Ribosomal_PSRP3/Ycf65
SynWH7803_2025 InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
SynWH7803_2029 InterPro IPR001182 Cell cycle protein; HMMPfam:PF01098 FTSW_RODA_SPOVE
InterPro IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site; PatternScan:PS00428 FTSW_RODA_SPOVE
SynWH7803_2064 InterPro IPR002583 Ribosomal protein S20; BlastProDom:PD004231 Ribosomal_S20
SynWH7803_2156 Gene product Phycobilisome rod-core linker polypeptide cpcG (L-RC 27.8)
InterPro IPR001297 Phycobilisome linker domain; BlastProDom:PD000852 PBS_linker_poly
InterPro IPR016470 Phycobilisome rod linker associated, CpeC/CpcI; HMMPIR:PIRSF005898 Phycobilisome_CpeC/CpcI
Blast Hits [nr] ref|ZP_01122709.1| phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5) [Synechococcus sp. WH 7805] gi|88788411|gb|EAR19566.1| phycobilisome rod-core linker polypeptide cpcG (L-RC 28.5) [Synechococcus sp. WH 7805]
Blast Hits [sprot] PYG1_SYNP2 (sp|Q05238) Phycobilisome rod-core linker polypeptide cpcG OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cpcG PE=1 SV=3
SynWH7803_2138 InterPro IPR001911 Ribosomal protein S21; BlastProDom:PD005521 Q7TU88_PROMP_Q7TU88;
Blast Hits [pln_est] gb|FE457217|FE457217 CAOS19417.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS19417 5', mRNA sequence.
SynWH7803_2492 InterPro IPR005117 Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; HMMPfam:PF03460 NIR_SIR_ferr
InterPro IPR005117 Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; superfamily:SSF55124 NiR_SiRalpha_1/3
SynWH7803_2218 InterPro IPR000238 Ribosome-binding factor A; BlastProDom:PD007327 Rib_bd_factA
SynWH7803_2371 InterPro IPR013823 Ribosomal protein L7/L12, C-terminal; BlastProDom:PD001326 Ribosomal_L7/L12_C
SynWH7803_2374 InterPro NULL NULL; BlastProDom:PD001367 Ribosomal_L11
SynWH7803_2383 InterPro NULL NULL; BlastProDom:PD004193 Arg_biosynth_ArgJ
SynWH7803_0007 Function Energy production and conversion: Energy production and conversion
SynWH7803_0189 Function Energy production and conversion: Energy production and conversion
SynWH7803_0198 Function Energy production and conversion: Energy production and conversion
SynWH7803_0207 Function Energy production and conversion: Energy production and conversion
SynWH7803_0214 Function Energy production and conversion: Energy production and conversion
SynWH7803_0216 Function Energy production and conversion: Energy production and conversion
SynWH7803_0217 Function Energy production and conversion: Energy production and conversion
SynWH7803_0251 Function Energy production and conversion: Energy production and conversion
SynWH7803_0252 Function Energy production and conversion: Energy production and conversion
SynWH7803_0253 Function Energy production and conversion: Energy production and conversion
SynWH7803_0345 Function Energy production and conversion: Energy production and conversion
SynWH7803_0367 Function Energy production and conversion: Energy production and conversion
SynWH7803_0371 Function Energy production and conversion: Energy production and conversion
SynWH7803_0436 Function Energy production and conversion: Energy production and conversion
SynWH7803_0454 Function Energy production and conversion: Energy production and conversion
SynWH7803_0470 Function Energy production and conversion: Energy production and conversion
SynWH7803_0476 Function Energy production and conversion: Energy production and conversion
SynWH7803_0477 Function Energy production and conversion: Energy production and conversion
SynWH7803_0488 Function Energy production and conversion: Energy production and conversion
SynWH7803_0489 Function Energy production and conversion: Energy production and conversion
SynWH7803_0491 Function Energy production and conversion: Energy production and conversion
SynWH7803_0494 Function Energy production and conversion: Energy production and conversion
SynWH7803_0519 Function Energy production and conversion: Energy production and conversion
SynWH7803_0533 Function Energy production and conversion: Energy production and conversion
SynWH7803_0534 Function Energy production and conversion: Energy production and conversion
SynWH7803_0537 Function Energy production and conversion: Energy production and conversion
SynWH7803_0544 Function Energy production and conversion: Energy production and conversion
SynWH7803_0546 Function Energy production and conversion: Energy production and conversion
SynWH7803_0547 Function Energy production and conversion: Energy production and conversion
SynWH7803_0582 Function Energy production and conversion: Energy production and conversion
SynWH7803_0605 Function Energy production and conversion: Energy production and conversion
Blast Hits [pln_est] gb|BW648107|BW648107 BW648107 cDNA from vegetative and sexual reproductive stages of Closterium Closterium peracerosum-strigosum-littorale complex cDNA clone CL26_C10 5', mRNA sequence.
SynWH7803_0624 Function Energy production and conversion: Energy production and conversion
SynWH7803_0625 Function Energy production and conversion: Energy production and conversion
SynWH7803_0637 Function Energy production and conversion: Energy production and conversion
SynWH7803_0671 Function Energy production and conversion: Energy production and conversion
SynWH7803_0672 Function Energy production and conversion: Energy production and conversion
SynWH7803_0679 Function Energy production and conversion: Energy production and conversion
SynWH7803_0685 Function Energy production and conversion: Energy production and conversion
SynWH7803_0686 Function Energy production and conversion: Energy production and conversion
SynWH7803_0706 Function Energy production and conversion: Energy production and conversion
SynWH7803_0713 Function Energy production and conversion: Energy production and conversion
SynWH7803_0714 Function Energy production and conversion: Energy production and conversion
SynWH7803_0715 Function Energy production and conversion: Energy production and conversion
SynWH7803_0752 Function Energy production and conversion: Energy production and conversion
SynWH7803_0753 Function Energy production and conversion: Energy production and conversion
SynWH7803_0772 Function Energy production and conversion: Energy production and conversion
SynWH7803_0871 Function Energy production and conversion: Energy production and conversion
SynWH7803_0877 Function Energy production and conversion: Energy production and conversion
SynWH7803_0960 Function Energy production and conversion: Energy production and conversion
SynWH7803_0971 Function Energy production and conversion: Energy production and conversion
SynWH7803_0984 Function Energy production and conversion: Energy production and conversion
SynWH7803_1002 Function Energy production and conversion: Energy production and conversion
SynWH7803_1151 Function Energy production and conversion: Energy production and conversion
SynWH7803_1152 Function Energy production and conversion: Energy production and conversion
SynWH7803_1239 Function Energy production and conversion: Energy production and conversion
SynWH7803_1242 Function Energy production and conversion: Energy production and conversion
SynWH7803_1317 Function Energy production and conversion: Energy production and conversion
SynWH7803_1353 Function Energy production and conversion: Energy production and conversion
SynWH7803_1363 Function Energy production and conversion: Energy production and conversion
SynWH7803_1421 Function Energy production and conversion: Energy production and conversion
SynWH7803_1536 Function Energy production and conversion: Energy production and conversion
SynWH7803_1550 Function Energy production and conversion: Energy production and conversion
SynWH7803_1564 Function Energy production and conversion: Energy production and conversion
SynWH7803_1580 Function Energy production and conversion: Energy production and conversion
SynWH7803_1596 Function Energy production and conversion: Energy production and conversion
SynWH7803_1624 Function Energy production and conversion: Energy production and conversion
SynWH7803_1627 Function Energy production and conversion: Energy production and conversion
SynWH7803_1628 Function Energy production and conversion: Energy production and conversion
SynWH7803_1629 Function Energy production and conversion: Energy production and conversion
SynWH7803_1659 Function Energy production and conversion: Energy production and conversion
SynWH7803_1678 Function Energy production and conversion: Energy production and conversion
SynWH7803_1734 Function Energy production and conversion: Energy production and conversion
SynWH7803_1744 Function Energy production and conversion: Energy production and conversion
SynWH7803_1750 Function Energy production and conversion: Energy production and conversion
SynWH7803_1820 Function Energy production and conversion: Energy production and conversion
SynWH7803_1850 Function Energy production and conversion: Energy production and conversion
SynWH7803_1851 Function Energy production and conversion: Energy production and conversion
SynWH7803_1871 Function Energy production and conversion: Energy production and conversion
SynWH7803_1872 Function Energy production and conversion: Energy production and conversion
SynWH7803_1873 Function Energy production and conversion: Energy production and conversion
SynWH7803_1884 Function Energy production and conversion: Energy production and conversion
SynWH7803_1977 Function Energy production and conversion: Energy production and conversion
SynWH7803_1979 Function Energy production and conversion: Energy production and conversion
SynWH7803_2000 Function Energy production and conversion: Energy production and conversion
SynWH7803_2014 Function Energy production and conversion: Energy production and conversion
SynWH7803_2016 Function Energy production and conversion: Energy production and conversion
SynWH7803_2017 Function Energy production and conversion: Energy production and conversion
SynWH7803_2018 Function Energy production and conversion: Energy production and conversion
SynWH7803_2019 Function Energy production and conversion: Energy production and conversion
SynWH7803_2020 Function Energy production and conversion: Energy production and conversion
SynWH7803_2021 Function Energy production and conversion: Energy production and conversion
SynWH7803_2022 Function Energy production and conversion: Energy production and conversion
SynWH7803_2039 Function Energy production and conversion: Energy production and conversion
SynWH7803_2053 Function Energy production and conversion: Energy production and conversion
SynWH7803_2056 Function Energy production and conversion: Energy production and conversion
SynWH7803_2151 Function Energy production and conversion: Energy production and conversion
SynWH7803_2175 Function Energy production and conversion: Energy production and conversion
SynWH7803_2200 Function Energy production and conversion: Energy production and conversion
SynWH7803_2208 Function Energy production and conversion: Energy production and conversion
SynWH7803_2278 Function Energy production and conversion: Energy production and conversion
SynWH7803_2280 Function Energy production and conversion: Energy production and conversion
SynWH7803_2288 Function Energy production and conversion: Energy production and conversion
SynWH7803_2289 Function Energy production and conversion: Energy production and conversion
SynWH7803_2290 Function Energy production and conversion: Energy production and conversion
SynWH7803_2291 Function Energy production and conversion: Energy production and conversion
SynWH7803_2292 Function Energy production and conversion: Energy production and conversion
SynWH7803_2314 Function Energy production and conversion: Energy production and conversion
SynWH7803_2405 Function Energy production and conversion: Energy production and conversion
SynWH7803_2406 Function Energy production and conversion: Energy production and conversion
SynWH7803_2481 Function Energy production and conversion: Energy production and conversion
SynWH7803_2505 Function Energy production and conversion: Energy production and conversion
SynWH7803_2507 Function Energy production and conversion: Energy production and conversion
SynWH7803_0172 Gene product Rod shape-determining protein MreB
Blast Hits [sprot] MREB_BACSU (sp|Q01465) Rod shape-determining protein mreB OS=Bacillus subtilis GN=mreB PE=3 SV=3
SynWH7803_0464 Gene product Possible Pex protein (Period-extender gene product)
SynWH7803_0478 Gene product Conserved hypothetical protein in phycobilisome rod gene region
SynWH7803_0483 Gene product Conserved hypothetical protein in phycobilisome rod gene region
SynWH7803_0495 Gene product Conserved hypothetical protein in phycobilisome rod gene region
SynWH7803_0496 Gene product Conserved hypothetical protein in phycobilisome rod gene region
SynWH7803_0500 Gene product Conserved hypothetical protein in phycobilisome rod gene region
SynWH7803_0504 Gene product Conserved hypothetical protein in phycobilisome rod gene region
Blast Hits [pln_est] gb|FE465857|FE465857 CAOS23980.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS23980 3', mRNA sequence.
SynWH7803_1976 GO term Molecular Function: endoribonuclease activity, producing 5'-phosphomonoesters (GO:0016891)
SynWH7803_2063 GO term Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888)
SynWH7803_0164 Blast Hits [nr] ref|NP_849259.2| actin filament-associated protein 1-like 1 [Mus musculus] gi|81898184|sp|Q8BZI0.1|AF1L1_MOUSE RecName: Full=Actin filament-associated protein 1-like 1; Short=AFAP1-like protein 1 gi|26330516|dbj|BAC28988.1| unnamed protein product [Mus musculus] gi|148677811|gb|EDL09758.1| expressed sequence AI173486, isoform CRA_c [Mus musculus] gi|151555501|gb|AAI48623.1| Actin filament associated protein 1-like 1 [synthetic construct] gi|157170132|gb|AAI53189.1| Actin filament associated protein 1-like 1 [synthetic construct] gi|187956755|gb|AAI38924.1| Actin filament associated protein 1-like 1 [Mus musculus]
SynWH7803_0134 Blast Hits [sprot] CCHCR_PANPA (sp|Q8HZ57) Coiled-coil alpha-helical rod protein 1 OS=Pan paniscus GN=CCHCR1 PE=3 SV=1
SynWH7803_0302 Blast Hits [sprot] RHAT_MANSM (sp|Q65Q27) L-rhamnose-proton symporter OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rhaT PE=3 SV=1
SynWH7803_0398 Blast Hits [sprot] DAPB_SALAR (sp|A9MR41) Dihydrodipicolinate reductase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=dapB PE=3 SV=1
SynWH7803_0654 Blast Hits [sprot] SELA_MANSM (sp|Q65Q15) L-seryl-tRNA(Sec) selenium transferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=selA PE=3 SV=1
SynWH7803_1430 Blast Hits [sprot] SYS_MANSM (sp|Q65SK3) Seryl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=serS PE=3 SV=1
SynWH7803_0028 Blast Hits [pln_est] gb|FE486591|FE486591 CAOT1513.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT1513 5', mRNA sequence.
SynWH7803_0069 Blast Hits [pln_est] gb|FE455996|FE455996 CAOS18739.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS18739 5', mRNA sequence.
SynWH7803_0077 Blast Hits [pln_est] gb|FE479809|FE479809 CAOS7557.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS7557 5', mRNA sequence.
SynWH7803_0079 Blast Hits [pln_est] gb|FE489360|FE489360 CAOT3864.rev CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT3864 3', mRNA sequence.
SynWH7803_0299 Blast Hits [pln_est] gb|FE492260|FE492260 CAOT5539.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT5539 5', mRNA sequence.
SynWH7803_0338 Blast Hits [pln_est] dbj|EC187993|EC187993 SOE00002379 Scenedesmus obliquus Large regular Scenedesmus obliquus cDNA similar to Glu-tRNA(Gln) amidotransferase subunit C; nuclear gene for chloroplast product, mRNA sequence.
SynWH7803_0368 Blast Hits [pln_est] gb|FE443878|FE443878 CAOS11363.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS11363 5', mRNA sequence.
SynWH7803_0405 Blast Hits [pln_est] gb|FE433411|FE433411 CAOP5234.rev CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP5234 3', mRNA sequence.
SynWH7803_0408 Blast Hits [pln_est] gb|FE502731|FE502731 CAOU11230.fwd CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU11230 5', mRNA sequence.
SynWH7803_0444 Blast Hits [pln_est] gb|FE499521|FE499521 CAOT9529.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT9529 5', mRNA sequence.
SynWH7803_0541 Blast Hits [pln_est] gb|FE476556|FE476556 CAOS5990.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS5990 5', mRNA sequence.
SynWH7803_0732 Blast Hits [pln_est] gb|FE508393|FE508393 CAOU14986.fwd CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU14986 5', mRNA sequence.
SynWH7803_0854 Blast Hits [pln_est] gb|FE505386|FE505386 CAOU13378.fwd CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU13378 5', mRNA sequence.
SynWH7803_0911 Blast Hits [pln_est] gb|FE453689|FE453689 CAOS17056.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS17056 5', mRNA sequence.
SynWH7803_1031 Blast Hits [pln_est] gb|FL759266|FL759266 CCGC8724.g1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgatum cDNA clone CCGC8724 3', mRNA sequence.
SynWH7803_1079 Blast Hits [pln_est] gb|FL759016|FL759016 CCGC8571.b1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgatum cDNA clone CCGC8571 5', mRNA sequence.
SynWH7803_1148 Blast Hits [TAIR_pep] ATCG00500.1 | Symbols: ACCD | Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis. | chrC:57075-58541 FORWARD
Blast Hits [pln_est] gb|FE479061|FE479061 CAOS7199.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS7199 5', mRNA sequence.
SynWH7803_1153 Blast Hits [pln_est] gb|FE458901|FE458901 CAOS20285.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS20285 5', mRNA sequence.
SynWH7803_1213 Blast Hits [pln_est] gb|FE440109|FE440109 CAOP9088.rev CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP9088 3', mRNA sequence.
SynWH7803_1220 Blast Hits [pln_est] gb|FE478696|FE478696 CAOS7023.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS7023 3', mRNA sequence.
SynWH7803_1237 Blast Hits [pln_est] gb|FE475221|FE475221 CAOS5342.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS5342 5', mRNA sequence.
SynWH7803_1295 Blast Hits [pln_est] gb|FE496785|FE496785 CAOT8090.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT8090 5', mRNA sequence.
SynWH7803_1304 Blast Hits [pln_est] gb|FE455996|FE455996 CAOS18739.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS18739 5', mRNA sequence.
SynWH7803_1483 Blast Hits [pln_est] gb|FL767920|FL767920 CCGC14421.b1 CCGC Panicum virgatum early floral buds + reproductive tissue (H) Panicum virgatum cDNA clone CCGC14421 5', mRNA sequence.
SynWH7803_1517 Blast Hits [pln_est] gb|FE431019|FE431019 CAOP3867.fwd CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP3867 5', mRNA sequence.
SynWH7803_1524 Blast Hits [pln_est] dbj|EC116163|EC116163 CIE00004627 Chlamydomonas incerta Regular library 2 Chlamydomonas incerta cDNA similar to oxygen-evolving complex 25.6 kD protein putative; chloroplast product, mRNA sequence.
SynWH7803_1538 Blast Hits [pln_est] gb|FC058755|FC058755 sT7aVVM_AER90B08 VVM Vitis vinifera cDNA clone VVM_AER90B08 5' similar to emb_CAO16944.1 unnamed protein product [Vitis vinifera]. Expect = 5e-59, mRNA sequence.
SynWH7803_1539 Blast Hits [pln_est] gb|FE458987|FE458987 CAOS20330.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS20330 3', mRNA sequence.
SynWH7803_1568 Blast Hits [pln_est] gb|FL772938|FL772938 CCGF6291.g1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virgatum cDNA clone CCGF6291 3', mRNA sequence.
SynWH7803_1594 Blast Hits [pln_est] gb|FE433607|FE433607 CAOP5345.rev CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP5345 3', mRNA sequence.
SynWH7803_1669 Blast Hits [pln_est] gb|FE432650|FE432650 CAOP4778.fwd CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP4778 5', mRNA sequence.
SynWH7803_1735 Blast Hits [pln_est] gb|FE468322|FE468322 CAOS25600.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS25600 5', mRNA sequence.
SynWH7803_1792 Blast Hits [pln_est] gb|FL775239|FL775239 CCGF7444.b1 CCGF Panicum virgatum early floral buds + reproductive tissue (L) Panicum virgatum cDNA clone CCGF7444 5', mRNA sequence.
SynWH7803_1836 Blast Hits [pln_est] gb|FE483891|FE483891 CAOS9729.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS9729 5', mRNA sequence.
SynWH7803_1854 Blast Hits [pln_est] gb|FE464974|FE464974 CAOS23528.rev CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS23528 3', mRNA sequence.
SynWH7803_1963 Blast Hits [pln_est] gb|FE491569|FE491569 CAOT5136.fwd CAOT Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOT5136 5', mRNA sequence.
SynWH7803_2066 Blast Hits [pln_est] gb|FE506528|FE506528 CAOU13988.fwd CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU13988 5', mRNA sequence.
SynWH7803_2115 Blast Hits [pln_est] gb|FE512295|FE512295 CAOU7843.rev CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU7843 3', mRNA sequence.
SynWH7803_2205 Blast Hits [pln_est] gb|FE509340|FE509340 CAOU15498.rev CAOU Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOU15498 3', mRNA sequence.
SynWH7803_2223 Blast Hits [pln_est] gb|FE452509|FE452509 CAOS16436.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS16436 5', mRNA sequence.
SynWH7803_2272 Blast Hits [pln_est] gb|FE432786|FE432786 CAOP4862.fwd CAOP Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOP4862 5', mRNA sequence.
SynWH7803_2281 Blast Hits [pln_est] gb|FE461709|FE461709 CAOS21810.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS21810 5', mRNA sequence.
SynWH7803_2329 Blast Hits [pln_est] gb|BW648085|BW648085 BW648085 cDNA from vegetative and sexual reproductive stages of Closterium Closterium peracerosum-strigosum-littorale complex cDNA clone CL26_A12 5', mRNA sequence.
SynWH7803_2418 Blast Hits [pln_est] gb|FE516699|FE516699 CAOX721.fwd CAOX Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOX721 5', mRNA sequence.
SynWH7803_2510 Blast Hits [pln_est] gb|FE483541|FE483541 CAOS9548.fwd CAOS Selaginella moellendorffii mixed tissues; whole juvenile plants with roots and reproductive stems with developing strobili Selaginella moellendorffii cDNA clone CAOS9548 5', mRNA sequence.
SynWH7803_0055 Blast Hits [TAIR_pep] AT2G38230.1 | Symbols: ATPDX1.1, PDX1.1 | ATPDX1.1 (pyridoxine biosynthesis 1.1); protein heterodimerization | chr2:16011475-16012404 FORWARD
SynWH7803_1117 Blast Hits [TAIR_pep] AT5G49970.1 | Symbols: ATPPOX, PDX3 | ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE); pyridoxamine-phosphate oxidase | chr5:20329213-20332900 FORWARD
SynWH7803_1531 Blast Hits [TAIR_pep] AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | chr5:23734396-23735495 FORWARD

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ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
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ColumnDescription and example
1Gene IDc.f. slr1311
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