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Full-text search result: 67 genes by "EMBRYO" TXT SET

Synechococcus sp. WH 7803 (67 genes ) TXT SET

SynWH7803_0029 Blast Hits [pln_est] gb|CN826126|CN826126 EL1289 Brassica embryo library (EL) Brassica napus cDNA clone EL1289 complete, mRNA sequence.
SynWH7803_0228 Blast Hits [pln_est] gb|BG322845|BG322845 EM1_14_H02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence.
SynWH7803_0307 Blast Hits [pln_est] dbj|DT625989|DT625989 EST1157913 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMA587 5' end, mRNA sequence.
SynWH7803_0643 Blast Hits [pln_est] gb|GO329793|GO329793 VBL6_29_P15_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
SynWH7803_0656 Blast Hits [pln_est] dbj|DT628397|DT628397 EST1157146 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMCX55 5' end, mRNA sequence.
SynWH7803_1142 Blast Hits [pln_est] dbj|DN460331|DN460331 EST956130 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIHX30 5' end, mRNA sequence.
SynWH7803_1241 Blast Hits [pln_est] dbj|DR689868|DR689868 EST1079954 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWACO39 3' end, mRNA sequence.
SynWH7803_1268 Blast Hits [pln_est] gb|BG606134|BG606134 WHE2960_H09_O18ZS Wheat dormant embryo cDNA library Triticum aestivum cDNA clone WHE2960_H09_O18, mRNA sequence.
SynWH7803_1325 Blast Hits [pln_est] gb|CN829497|CN829497 EL3536R Brassica embryo library (EL) Brassica napus cDNA clone EL3536 5', mRNA sequence.
SynWH7803_1487 Blast Hits [pln_est] gb|GO343389|GO343389 VBL6_9_J08_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypogaea cDNA, mRNA sequence.
SynWH7803_1591 Blast Hits [pln_est] gb|FK251474|FK251474 BnSS1_0022 Suppression subtractive hybridization cDNA library from embryo 35 DAF (Ref.embryo 10 DAF) Brassica napus cDNA clone BnSS1_0022, mRNA sequence.
SynWH7803_1863 Blast Hits [pln_est] gb|CN825834|CN825834 EL1006 Brassica embryo library (EL) Brassica napus cDNA clone EL1006 complete, mRNA sequence.
SynWH7803_1927 Blast Hits [pln_est] dbj|DV997354|DV997354 GQ027113.B3_D08 GQ027: Mature Somatic EMBRYOS Picea glauca cDNA clone GQ027113_D08 5', mRNA sequence.
SynWH7803_1998 Blast Hits [pln_est] gb|CN825834|CN825834 EL1006 Brassica embryo library (EL) Brassica napus cDNA clone EL1006 complete, mRNA sequence.
SynWH7803_2241 Blast Hits [pln_est] dbj|DR694880|DR694880 EST1084973 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAEH92 3' end, mRNA sequence.
SynWH7803_2324 Blast Hits [pln_est] gb|FG963693|FG963693 MA_LYP9_02477 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA sequence.
SynWH7803_0022 Blast Hits [TAIR_pep] AT5G17710.2 | Symbols: EMB1241 | EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization | chr5:5839560-5841639 REVERSE
SynWH7803_0025 Blast Hits [TAIR_pep] AT1G67440.1 | Symbols: emb1688 | emb1688 (embryo defective 1688); GTP binding / GTPase | chr1:25263905-25265551 REVERSE
SynWH7803_0074 Blast Hits [TAIR_pep] AT5G63420.1 | Symbols: emb2746 | emb2746 (embryo defective 2746); DNA binding / catalytic/ hydrolase | chr5:25400515-25405807 FORWARD
SynWH7803_0103 Blast Hits [TAIR_pep] AT2G38770.1 | Symbols: EMB2765 | EMB2765 (EMBRYO DEFECTIVE 2765) | chr2:16203185-16210253 REVERSE
SynWH7803_0112 Blast Hits [TAIR_pep] AT4G04350.1 | Symbols: EMB2369 | EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | chr4:2128129-2133030 FORWARD
SynWH7803_0169 Blast Hits [TAIR_pep] AT4G13940.1 | Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | MEE58 (MATERNAL EFFECT EMBRYO ARREST 58); adenosylhomocysteinase/ copper ion binding | chr4:8054931-8056676 FORWARD
SynWH7803_0185 Blast Hits [TAIR_pep] AT1G21690.1 | Symbols: emb1968 | emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nucleotide binding | chr1:7615675-7618362 FORWARD
SynWH7803_0189 Blast Hits [TAIR_pep] AT4G20060.1 | Symbols: EMB1895 | EMB1895 (EMBRYO DEFECTIVE 1895); binding | chr4:10854790-10859330 REVERSE
SynWH7803_0255 Blast Hits [TAIR_pep] AT2G34090.2 | Symbols: MEE18 | MEE18 (maternal effect embryo arrest 18) | chr2:14396283-14399170 REVERSE
SynWH7803_0358 Blast Hits [TAIR_pep] AT1G48850.1 | Symbols: EMB1144 | EMB1144 (embryo defective 1144); chorismate synthase | chr1:18065154-18067956 REVERSE
SynWH7803_0406 Blast Hits [TAIR_pep] AT1G75350.1 | Symbols: emb2184 | emb2184 (embryo defective 2184); structural constituent of ribosome | chr1:28272163-28272687 FORWARD
SynWH7803_0408 Blast Hits [TAIR_pep] AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo defective 1473); structural constituent of ribosome | chr1:29575997-29577406 FORWARD
SynWH7803_0420 Blast Hits [TAIR_pep] AT1G05190.1 | Symbols: emb2394 | emb2394 (embryo defective 2394); structural constituent of ribosome | chr1:1502515-1503738 REVERSE
SynWH7803_0568 Blast Hits [TAIR_pep] AT3G12080.1 | Symbols: emb2738 | emb2738 (embryo defective 2738); GTP binding | chr3:3847851-3851980 FORWARD
SynWH7803_0575 Blast Hits [TAIR_pep] AT1G78130.1 | Symbols: UNE2 | UNE2 (unfertilized embryo sac 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | chr1:29400171-29401814 FORWARD
SynWH7803_0582 Blast Hits [TAIR_pep] AT1G34430.1 | Symbols: EMB3003 | EMB3003 (embryo defective 3003); acyltransferase/ dihydrolipoyllysine-residue acetyltransferase/ protein binding | chr1:12588027-12590084 REVERSE
SynWH7803_0762 Blast Hits [TAIR_pep] AT2G25660.1 | Symbols: emb2410 | emb2410 (embryo defective 2410) | chr2:10916456-10927390 REVERSE
SynWH7803_0774 Blast Hits [TAIR_pep] AT3G62210.1 | Symbols: EDA32 | EDA32 (embryo sac development arrest 32) | chr3:23026910-23028113 REVERSE
SynWH7803_0776 Blast Hits [TAIR_pep] AT2G04842.1 | Symbols: EMB2761 | EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleotide binding / threonine-tRNA ligase | chr2:1698466-1701271 REVERSE
SynWH7803_0917 Blast Hits [TAIR_pep] AT4G13610.1 | Symbols: MEE57 | MEE57 (maternal effect embryo arrest 57); DNA (cytosine-5-)-methyltransferase/ DNA binding / protein binding | chr4:7915022-7921231 FORWARD
SynWH7803_1083 Blast Hits [TAIR_pep] AT1G62050.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G11740.1); Has 967 Blast hits to 722 proteins in 118 species: Archae - 0; Bacteria - 24; Metazoa - 556; Fungi - 45; Plants - 193; Viruses - 2; Other Eukaryotes - 147 (source: NCBI BLink). | chr1:22936323-22938874 REVERSE
SynWH7803_1106 Blast Hits [TAIR_pep] AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARD
SynWH7803_1167 Blast Hits [TAIR_pep] AT3G16290.1 | Symbols: EMB2083 | EMB2083 (embryo defective 2083); ATP binding / ATP-dependent peptidase/ ATPase/ metalloendopeptidase/ metallopeptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase | chr3:5521187-5524995 REVERSE
SynWH7803_1260 Blast Hits [TAIR_pep] AT4G04350.1 | Symbols: EMB2369 | EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | chr4:2128129-2133030 FORWARD
SynWH7803_1278 Blast Hits [TAIR_pep] AT3G60360.1 | Symbols: EDA14, UTP11 | EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) | chr3:22312477-22314002 REVERSE
SynWH7803_1293 Blast Hits [TAIR_pep] AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | EMB2730 (EMBRYO DEFECTIVE 2730); 3'-5'-exoribonuclease/ RNA binding / ribonuclease | chr5:454902-459063 FORWARD
SynWH7803_1318 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
SynWH7803_1328 Blast Hits [TAIR_pep] AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective 2726); RNA binding / translation elongation factor | chr4:14317744-14321315 FORWARD
SynWH7803_1335 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
SynWH7803_1401 Blast Hits [TAIR_pep] AT3G62210.1 | Symbols: EDA32 | EDA32 (embryo sac development arrest 32) | chr3:23026910-23028113 REVERSE
SynWH7803_1418 Blast Hits [TAIR_pep] AT3G22490.1 | Symbols: | late embryogenesis abundant protein, putative / LEA protein, putative | chr3:7969785-7970738 REVERSE
SynWH7803_1574 Blast Hits [TAIR_pep] AT4G26300.1 | Symbols: emb1027 | emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA ligase/ arginine-tRNA ligase/ nucleotide binding | chr4:13308400-13313109 REVERSE
SynWH7803_1626 Blast Hits [TAIR_pep] AT3G50790.1 | Symbols: | late embryogenesis abundant protein, putative / LEA protein, putative | chr3:18880074-18881940 REVERSE
SynWH7803_1652 Blast Hits [TAIR_pep] AT2G42560.1 | Symbols: | late embryogenesis abundant domain-containing protein / LEA domain-containing protein | chr2:17714813-17716821 REVERSE
SynWH7803_1659 Blast Hits [TAIR_pep] AT5G37510.2 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900447 FORWARD
SynWH7803_1740 Blast Hits [TAIR_pep] AT2G34780.1 | Symbols: EMB1611, MEE22 | MEE22 (MATERNAL EFFECT EMBRYO ARREST 22) | chr2:14668653-14673607 FORWARD
SynWH7803_1770 Blast Hits [TAIR_pep] AT3G48110.1 | Symbols: EDD1, EDD | EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1); glycine-tRNA ligase | chr3:17763111-17770964 FORWARD
SynWH7803_1847 Blast Hits [TAIR_pep] AT5G49930.1 | Symbols: emb1441 | emb1441 (embryo defective 1441); nucleic acid binding / zinc ion binding | chr5:20308260-20312736 REVERSE
SynWH7803_1862 Blast Hits [TAIR_pep] AT3G01015.1 | Symbols: | EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, F mature embryo stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15510.1); Has 341 Blast hits to 320 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 12; Plants - 165; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | chr3:1798-4017 REVERSE
SynWH7803_1946 Blast Hits [TAIR_pep] AT3G02660.1 | Symbols: emb2768 | emb2768 (EMBRYO DEFECTIVE 2768); ATP binding / RNA binding / aminoacyl-tRNA ligase/ nucleotide binding / tyrosine-tRNA ligase | chr3:570221-571756 REVERSE
SynWH7803_1974 Blast Hits [TAIR_pep] AT5G24400.1 | Symbols: emb2024 | emb2024 (embryo defective 2024); 6-phosphogluconolactonase/ catalytic | chr5:8330532-8331784 REVERSE
SynWH7803_2040 Blast Hits [TAIR_pep] AT1G70070.1 | Symbols: EMB25, PDE317, ISE2 | EMB25 (EMBRYO DEFECTIVE 25); ATP-dependent helicase/ RNA helicase | chr1:26390016-26394148 REVERSE
SynWH7803_2336 Blast Hits [TAIR_pep] AT4G26300.1 | Symbols: emb1027 | emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA ligase/ arginine-tRNA ligase/ nucleotide binding | chr4:13308400-13313109 REVERSE
SynWH7803_2382 Blast Hits [TAIR_pep] AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796); ATP binding | chr3:18256086-18257975 FORWARD
SynWH7803_2398 Blast Hits [TAIR_pep] AT5G22800.1 | Symbols: EMB1030 | EMB1030 (EMBRYO DEFECTIVE 1030); ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding | chr5:7616221-7619961 REVERSE
SynWH7803_2425 Blast Hits [TAIR_pep] AT4G09980.1 | Symbols: EMB1691 | EMB1691 (EMBRYO DEFECTIVE 1691); S-adenosylmethionine-dependent methyltransferase/ methyltransferase/ nucleic acid binding | chr4:6247978-6252030 REVERSE
SynWH7803_2440 Blast Hits [TAIR_pep] AT5G16715.1 | Symbols: EMB2247 | EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase | chr5:5485353-5493229 FORWARD
SynWH7803_2470 Blast Hits [TAIR_pep] AT2G28880.1 | Symbols: emb1997 | emb1997 (embryo defective 1997); anthranilate synthase/ catalytic/ oxo-acid-lyase | chr2:12398937-12403108 REVERSE
SynWH7803_2475 Blast Hits [TAIR_pep] AT1G80410.1 | Symbols: EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding | chr1:30227963-30234832 REVERSE
SynWH7803_2481 Blast Hits [TAIR_pep] AT5G37510.1 | Symbols: EMB1467 | EMB1467 (embryo defective 1467); NADH dehydrogenase (ubiquinone)/ NADH dehydrogenase/ electron carrier/ iron-sulfur cluster binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH | chr5:14897490-14900352 FORWARD
SynWH7803_2515 Blast Hits [TAIR_pep] AT3G06350.1 | Symbols: EMB3004, MEE32 | MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | chr3:1924536-1927701 REVERSE

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
Table of contents (67)
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