| Gene set by search |
TXT
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| SynWH7803_2005 | InterPro | IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site; PatternScan:PS00491 PROLINE_PEPTIDASE |
| SynWH7803_0362 | Gene product | ABC-type glycine betaine/L-proline transport ATP-binding protein ProV |
| InterPro | IPR005892 Glycine betaine/L-proline transport ATP-binding subunit; HMMTigr:TIGR01186 proV | |
| Blast Hits | [nr] ref|ZP_01123472.1| ABC transporter, ATP binding component, glycine betaine/proline family protein [Synechococcus sp. WH 7805] gi|88788000|gb|EAR19156.1| ABC transporter, ATP binding component, glycine betaine/proline family protein [Synechococcus sp. WH 7805] | |
| Blast Hits | [sprot] PROV_ECOLI (sp|P14175) Glycine betaine/L-proline transport ATP-binding protein proV OS=Escherichia coli (strain K12) GN=proV PE=1 SV=1 | |
| SynWH7803_0363 | Gene product | ABC-type glycine betaine/L-proline transport system permease protein ProW |
| Blast Hits | [nr] ref|ZP_01123471.1| ABC transporter, glycine betaine/proline family, membrane component [Synechococcus sp. WH 7805] gi|88787999|gb|EAR19155.1| ABC transporter, glycine betaine/proline family, membrane component [Synechococcus sp. WH 7805] | |
| SynWH7803_0364 | Gene product | ABC-type proline/glycine betaine transport systems, periplasmic components |
| Blast Hits | [nr] ref|ZP_01123470.1| ABC transporter binding protein, glycine betaine/proline family protein [Synechococcus sp. WH 7805] gi|88787998|gb|EAR19154.1| ABC transporter binding protein, glycine betaine/proline family protein [Synechococcus sp. WH 7805] | |
| SynWH7803_1665 | Gene product | Possible proline/betaine transporter, MFS superfamily |
| Blast Hits | [nr] ref|ZP_01124557.1| putative proline/betaine transporter, MFS family protein [Synechococcus sp. WH 7805] gi|88786990|gb|EAR18148.1| putative proline/betaine transporter, MFS family protein [Synechococcus sp. WH 7805] | |
| Blast Hits | [sprot] PROP_ECOLI (sp|P0C0L7) Proline/betaine transporter OS=Escherichia coli (strain K12) GN=proP PE=1 SV=1 | |
| SynWH7803_0573 | GO term | Biological Process: proline biosynthetic process (GO:0006561) |
| SynWH7803_0614 | GO term | Biological Process: proline biosynthetic process (GO:0006561) |
| SynWH7803_0622 | GO term | Molecular Function: proline-tRNA ligase activity (GO:0004827) |
| Blast Hits | [TAIR_pep] AT5G52520.1 | Symbols: OVA6, PRORS1 | OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / proline-tRNA ligase | chr5:21311112-21313875 FORWARD | |
| SynWH7803_0764 | GO term | Biological Process: proline biosynthetic process (GO:0006561) |
| SynWH7803_1154 | GO term | Biological Process: proline biosynthetic process (GO:0006561) |
| SynWH7803_2382 | Blast Hits | [nr] ref|ZP_01125290.1| Proline-rich region [Synechococcus sp. WH 7805] gi|88786168|gb|EAR17329.1| Proline-rich region [Synechococcus sp. WH 7805] |
| SynWH7803_0160 | Blast Hits | [sprot] PROP_STAAW (sp|Q8NXW9) Putative proline/betaine transporter OS=Staphylococcus aureus (strain MW2) GN=proP PE=3 SV=1 |
| SynWH7803_0161 | Blast Hits | [sprot] PROP_SALTY (sp|P40862) Proline/betaine transporter OS=Salmonella typhimurium GN=proP PE=3 SV=2 |
| SynWH7803_0571 | Blast Hits | [pln_est] dbj|EC183121|EC183121 PWE00003650 Prototheca wickerhamii Large regular Prototheca wickerhamii cDNA similar to Proline synthetase associated protein - related, mRNA sequence. |
| SynWH7803_0325 | Blast Hits | [TAIR_pep] AT4G16790.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr4:9451747-9453168 REVERSE |
| SynWH7803_1393 | Blast Hits | [TAIR_pep] AT5G07570.1 | Symbols: | glycine/proline-rich protein | chr5:2391722-2396329 FORWARD |
| SynWH7803_2043 | Blast Hits | [TAIR_pep] AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has 280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4; Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes - 136 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE |
| SynWH7803_2117 | Blast Hits | [TAIR_pep] AT3G06300.1 | Symbols: AT-P4H-2 | AT-P4H-2 (A. THALIANA P4H ISOFORM 2); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen | chr3:1907744-1909675 FORWARD |
| Gene set by search |
TXT
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