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Full-text search result: 103 genes by "metal" TXT SET

Synechococcus sp. WH 7803 (103 genes ) TXT SET

SynWH7803_1171 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
SynWH7803_1199 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
SynWH7803_1241 InterPro IPR020583 Inositol monophosphatase, metal-binding site; PatternScan:PS00629 IMP_1
SynWH7803_1336 GO term Molecular Function: metal ion binding (GO:0046872)
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
InterPro IPR011249 Metalloenzyme, LuxS/M16 peptidase-like, metal-binding; superfamily:SSF63411 Metalloenz_metal-bd
SynWH7803_1337 GO term Molecular Function: metal ion binding (GO:0046872)
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
InterPro IPR011249 Metalloenzyme, LuxS/M16 peptidase-like, metal-binding; superfamily:SSF63411 Metalloenz_metal-bd
SynWH7803_1390 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
SynWH7803_1401 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
InterPro IPR014577 Uncharacterised conserved protein, metallophosphoesterase domain-containing, ML1119 type; HMMPIR:PIRSF033093 UCP_ML1119
SynWH7803_1506 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
SynWH7803_1571 InterPro IPR003607 Metal-dependent phosphohydrolase, HD domain; HMMSmart:SM00471 HDc
InterPro IPR006674 Metal-dependent phosphohydrolase, HD subdomain; HMMPfam:PF01966 HD
InterPro IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain; HMMPfam:PF07698 7TM-7TMR_HD
SynWH7803_1803 GO term Molecular Function: metallocarboxypeptidase activity (GO:0004181)
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; FPrintScan:PR00998 CRBOXYPTASET
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; HMMPIR:PIRSF006615 Zn_crbxpep_Taq
InterPro IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase; HMMPfam:PF02074 Peptidase_M32
SynWH7803_1906 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
InterPro IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase; HMMTigr:TIGR00054 Pept_M50_Zn
Blast Hits [TAIR_pep] AT1G05140.1 | Symbols: | membrane-associated zinc metalloprotease, putative | chr1:1482681-1484006 FORWARD
Blast Hits [sprot] Y1821_SYNY3 (sp|P73714) Putative zinc metalloprotease slr1821 OS=Synechocystis sp. (strain PCC 6803) GN=slr1821 PE=3 SV=1
SynWH7803_1995 GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR006124 Metalloenzyme; HMMPfam:PF01676 Metalloenzyme
SynWH7803_2083 InterPro IPR004843 Metallophosphoesterase; HMMPfam:PF00149 Metallophos
SynWH7803_2448 Gene product Conserved hypothetical membrane protein (putative metal-binding protein)
InterPro IPR019250 Protein of unknown function DUF2227, metal-binding; HMMPfam:PF09988 DUF2227
SynWH7803_2245 GO term Biological Process: metal ion transport (GO:0030001)
GO term Molecular Function: metal ion binding (GO:0046872)
GO term Molecular Function: metal ion transmembrane transporter activity (GO:0046873)
InterPro IPR006121 Heavy metal transport/detoxification protein; HMMPfam:PF00403 HMA
InterPro IPR006121 Heavy metal transport/detoxification protein; ProfileScan:PS50846 HMA_2
InterPro IPR006121 Heavy metal transport/detoxification protein; superfamily:SSF55008 HeavyMe_transpt
InterPro IPR006416 ATPase, P-type, heavy metal translocating; HMMTigr:TIGR01525 ATPase-IB_hvy
InterPro IPR017969 Heavy-metal-associated, conserved site; PatternScan:PS01047 HMA_1
SynWH7803_2342 InterPro IPR003607 Metal-dependent phosphohydrolase, HD domain; HMMSmart:SM00471 HDc
InterPro IPR006674 Metal-dependent phosphohydrolase, HD subdomain; HMMPfam:PF01966 HD
Blast Hits [nr] ref|ZP_01125332.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805] gi|88786210|gb|EAR17371.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
SynWH7803_0074 Gene product Predicted hydrolase of the metallo-beta-lactamase superfamily
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR011108 RNA-metabolising metallo-beta-lactamase; HMMPfam:PF07521 RMMBL
SynWH7803_0106 Gene product Possible Zn-dependent metalloprotease
GO term Molecular Function: metallopeptidase activity (GO:0008237)
InterPro IPR006026 Peptidase, metallopeptidase; HMMSmart:SM00235 ZnMc
InterPro IPR011049 Serralysin-like metalloprotease, C-terminal; superfamily:SSF51120 Serralysn_like_C
SynWH7803_0111 InterPro IPR011049 Serralysin-like metalloprotease, C-terminal; superfamily:SSF51120 Serralysn_like_C
SynWH7803_0122 InterPro IPR011049 Serralysin-like metalloprotease, C-terminal; superfamily:SSF51120 Serralysn_like_C
SynWH7803_0123 InterPro IPR011049 Serralysin-like metalloprotease, C-terminal; superfamily:SSF51120 Serralysn_like_C
SynWH7803_0531 InterPro IPR003607 Metal-dependent phosphohydrolase, HD domain; HMMSmart:SM00471 HDc
InterPro IPR006674 Metal-dependent phosphohydrolase, HD subdomain; HMMPfam:PF01966 HD
Blast Hits [TAIR_pep] AT5G40270.1 | Symbols: | metal-dependent phosphohydrolase HD domain-containing protein | chr5:16093394-16097093 REVERSE
Blast Hits [nr] ref|ZP_01123299.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805] gi|88787827|gb|EAR18983.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
SynWH7803_0744 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
GO term Molecular Function: metallopeptidase activity (GO:0008237)
InterPro IPR001818 Peptidase M10, metallopeptidase; HMMPfam:PF00413 Peptidase_M10
InterPro IPR006026 Peptidase, metallopeptidase; HMMSmart:SM00235 ZnMc
Blast Hits [sprot] 165R_IIV6 (sp|O55761) Putative metalloproteinase 165R OS=Invertebrate iridescent virus 6 GN=IIV6-165R PE=3 SV=1
SynWH7803_0672 InterPro NULL NULL; superfamily:SSF53807 "Helical backbone" metal receptor
SynWH7803_0845 Gene product Metallothionein
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR000518 Metallothionein, family 14, prokaryote; BlastProDom:PD019076 Metallthion_Pro
InterPro IPR000518 Metallothionein, family 14, prokaryote; FPrintScan:PR00859 MTPROKARYOTE
InterPro IPR000518 Metallothionein, family 14, prokaryote; HMMPfam:PF02069 Metallothio_Pro
InterPro IPR017854 Metallothionein superfamily; superfamily:SSF57868 Metallothionein_sfam
Blast Hits [nr] ref|NP_896454.1| metallothionein [Synechococcus sp. WH 8102] gi|33638579|emb|CAE06874.1| bacterial metallothionein [Synechococcus sp. WH 8102]
Blast Hits [sprot] MT_THEVL (sp|P30565) Metallothionein OS=Thermosynechococcus vulcanus GN=mtnA PE=3 SV=2
SynWH7803_0978 GO term Biological Process: metal ion transport (GO:0030001)
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR006127 ABC transporter metal-binding lipoprotein; HMMPfam:PF01297 SBP_bac_9
SynWH7803_0990 GO term Biological Process: metal ion transport (GO:0030001)
GO term Molecular Function: metal ion binding (GO:0046872)
InterPro IPR006127 ABC transporter metal-binding lipoprotein; HMMPfam:PF01297 SBP_bac_9
Blast Hits [sprot] Y067_CHLTR (sp|Q9S529) Uncharacterized metal-binding lipoprotein CT_067 OS=Chlamydia trachomatis GN=CT_067 PE=3 SV=2
SynWH7803_0187 Gene product Zinc metallopeptidase M20/M25/M40 family
Blast Hits [TAIR_pep] AT3G02875.1 | Symbols: ILR1 | ILR1 (IAA-LEUCINE RESISTANT 1); IAA-Leu conjugate hydrolase/ IAA-Phe conjugate hydrolase/ metallopeptidase | chr3:631993-633859 FORWARD
Blast Hits [nr] ref|ZP_01123715.1| Zinc metallopeptidase M20/M25/M40 family protein [Synechococcus sp. WH 7805] gi|88788243|gb|EAR19399.1| Zinc metallopeptidase M20/M25/M40 family protein [Synechococcus sp. WH 7805]
SynWH7803_0447 Gene product Possible metal-dependent protease of the PAD1/JAB1 superfamily
SynWH7803_0631 Gene product Predicted metal-dependent membrane protease
SynWH7803_0921 Gene product Predicted metal-binding protein
SynWH7803_0952 Gene product Metallo-beta-lactamase superfamily hydrolase
Blast Hits [TAIR_pep] AT4G33540.1 | Symbols: | metallo-beta-lactamase family protein | chr4:16130882-16133678 FORWARD
Blast Hits [nr] ref|ZP_01123796.1| Metallo-beta-lactamase superfamily hydrolase [Synechococcus sp. WH 7805] gi|88787274|gb|EAR18431.1| Metallo-beta-lactamase superfamily hydrolase [Synechococcus sp. WH 7805]
SynWH7803_0981 Gene product Permease of the drug/metabolite transporter (DMT) superfamily (metal resistance protein)
SynWH7803_1120 Gene product Zinc metallopeptidase with a LysM domain
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [sprot] YEBA_SHIFL (sp|P0AFT1) Uncharacterized metalloprotease yebA OS=Shigella flexneri GN=yebA PE=3 SV=1
SynWH7803_1273 Gene product Predicted metal-dependent phosphoesterases (PHP family)
SynWH7803_1532 Gene product Conserved hypothetical membrane protein, possible metal dependent phosphoesterase
SynWH7803_1769 Gene product Predicted membrane metal-binding protein
SynWH7803_1887 Gene product Putative metalloendopeptidase
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [sprot] Y409_HAEIN (sp|P44693) Uncharacterized metalloprotease HI_0409 OS=Haemophilus influenzae GN=HI_0409 PE=3 SV=1
SynWH7803_1902 Gene product Predicted metal-binding, possibly nucleic acid-binding protein
SynWH7803_2254 Gene product Inactive homolog of metal-dependent protease, putative molecular chaperone
GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
SynWH7803_2327 Gene product Predicted metal-dependent hydrolase
GO term Molecular Function: metallopeptidase activity (GO:0008237)
Blast Hits [sprot] Y2661_SYNS3 (sp|Q0I6S3) Putative metalloprotease sync_2661 OS=Synechococcus sp. (strain CC9311) GN=sync_2661 PE=3 SV=1
SynWH7803_2330 Gene product Putative Zn-dependent hydrolase of the metallo-beta-lactamase superfamily
Blast Hits [sprot] Y1314_THEON (sp|B6YXJ1) UPF0173 metal-dependent hydrolase TON_1314 OS=Thermococcus onnurineus (strain NA1) GN=TON_1314 PE=3 SV=1
SynWH7803_0248 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0249 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0251 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0355 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [TAIR_pep] AT5G42270.1 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | chr5:16902659-16905102 FORWARD
SynWH7803_0391 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0537 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0538 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0560 GO term Molecular Function: metal ion binding (GO:0046872)
Blast Hits [TAIR_pep] AT4G14716.1 | Symbols: ATARD1 | ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | chr4:8430484-8431867 REVERSE
SynWH7803_0654 GO term Molecular Function: transition metal ion binding (GO:0046914)
SynWH7803_0661 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [TAIR_pep] AT5G35220.1 | Symbols: EGY1 | EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1); metalloendopeptidase | chr5:13484606-13487546 REVERSE
Blast Hits [sprot] Y528_SYNY3 (sp|Q55518) Putative zinc metalloprotease sll0528 OS=Synechocystis sp. (strain PCC 6803) GN=sll0528 PE=3 SV=1
SynWH7803_0726 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0747 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0771 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
SynWH7803_0871 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0951 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1102 GO term Molecular Function: metal ion binding (GO:0046872)
GO term Molecular Function: transition metal ion binding (GO:0046914)
SynWH7803_1116 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD
SynWH7803_1216 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD
SynWH7803_1229 GO term Biological Process: metal ion transport (GO:0030001)
GO term Molecular Function: metal ion transmembrane transporter activity (GO:0046873)
SynWH7803_1277 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1320 GO term Molecular Function: metallopeptidase activity (GO:0008237)
SynWH7803_1422 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1536 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1555 GO term Molecular Function: metallopeptidase activity (GO:0008237)
SynWH7803_1622 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1689 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
Blast Hits [TAIR_pep] AT1G50250.1 | Symbols: FTSH1 | FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | chr1:18614398-18616930 REVERSE
SynWH7803_1742 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_1832 GO term Molecular Function: metalloexopeptidase activity (GO:0008235)
Blast Hits [TAIR_pep] AT1G13270.1 | Symbols: MAP1C, MAP1B | MAP1C (METHIONINE AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase | chr1:4544999-4547155 FORWARD
SynWH7803_1843 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
SynWH7803_1951 GO term Molecular Function: metalloexopeptidase activity (GO:0008235)
SynWH7803_2005 GO term Molecular Function: metalloexopeptidase activity (GO:0008235)
Blast Hits [TAIR_pep] AT1G09300.2 | Symbols: | metallopeptidase M24 family protein | chr1:3004485-3008131 FORWARD
SynWH7803_2098 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2099 GO term Molecular Function: metal ion binding (GO:0046872)
Blast Hits [TAIR_pep] AT1G69740.2 | Symbols: HEMB1 | HEMB1; catalytic/ metal ion binding / porphobilinogen synthase | chr1:26232197-26234713 FORWARD
SynWH7803_2143 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2454 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2460 GO term Molecular Function: transition metal ion binding (GO:0046914)
SynWH7803_2463 GO term Molecular Function: metalloendopeptidase activity (GO:0004222)
SynWH7803_2478 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2208 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2212 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_2378 GO term Molecular Function: metal ion binding (GO:0046872)
SynWH7803_0389 Blast Hits [sprot] ZMPB_STRPN (sp|Q9L7Q2) Zinc metalloprotease zmpB OS=Streptococcus pneumoniae GN=zmpB PE=3 SV=2
SynWH7803_0793 Blast Hits [sprot] SPED_ALKMQ (sp|A6TS03) S-adenosylmethionine decarboxylase proenzyme OS=Alkaliphilus metalliredigens (strain QYMF) GN=speD PE=3 SV=1
SynWH7803_0818 Blast Hits [sprot] METX_GEOMG (sp|Q39RX3) Homoserine O-acetyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=metX PE=3 SV=1
SynWH7803_0914 Blast Hits [sprot] ACE2_SCHPO (sp|O14258) Metallothionein expression activator OS=Schizosaccharomyces pombe GN=ace2 PE=2 SV=1
SynWH7803_1620 Blast Hits [sprot] YSL14_ORYSJ (sp|Q6H7J6) Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1
SynWH7803_1663 Blast Hits [sprot] Y764_THEAC (sp|Q9HK42) UPF0173 metal-dependent hydrolase Ta0764 OS=Thermoplasma acidophilum GN=Ta0764 PE=3 SV=2
SynWH7803_1806 Blast Hits [sprot] YCIC_BACSU (sp|P94400) Putative metal chaperone yciC OS=Bacillus subtilis GN=yciC PE=2 SV=1
SynWH7803_1882 Blast Hits [sprot] ZMPB_STRPN (sp|Q9L7Q2) Zinc metalloprotease zmpB OS=Streptococcus pneumoniae GN=zmpB PE=3 SV=2
SynWH7803_1900 Blast Hits [sprot] SYA_METS5 (sp|A4YH91) Alanyl-tRNA synthetase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=alaS PE=3 SV=1
SynWH7803_2286 Blast Hits [sprot] QUEA_GEOMG (sp|Q39XD1) S-adenosylmethionine:tRNA ribosyltransferase-isomerase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=queA PE=3 SV=1
SynWH7803_1334 Blast Hits [pln_est] gb|FP029811|FP029811 FP029811 LG0AAA Quercus robur cDNA clone LG0AAA15YK04RM1 similar to CZCB_RALME Cobalt-zinc-cadmium resistance protein czcB . - Ralstonia metallidurans, mRNA sequence.
SynWH7803_0319 Blast Hits [TAIR_pep] AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | chr5:4950411-4952777 REVERSE
SynWH7803_0653 Blast Hits [TAIR_pep] AT1G44318.1 | Symbols: hemb2 | hemb2; catalytic/ metal ion binding / porphobilinogen synthase | chr1:16831016-16833916 FORWARD
SynWH7803_0782 Blast Hits [TAIR_pep] AT2G47830.1 | Symbols: | cation efflux family protein / metal tolerance protein, putative (MTPc1) | chr2:19591094-19593973 REVERSE
SynWH7803_0935 Blast Hits [TAIR_pep] AT1G06900.1 | Symbols: | catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | chr1:2115155-2120635 REVERSE
SynWH7803_1082 Blast Hits [TAIR_pep] AT1G44318.1 | Symbols: hemb2 | hemb2; catalytic/ metal ion binding / porphobilinogen synthase | chr1:16831016-16833916 FORWARD
SynWH7803_1160 Blast Hits [TAIR_pep] AT1G71696.2 | Symbols: SOL1 | SOL1 (SUPPRESSOR OF LLP1 1); carboxypeptidase/ metallocarboxypeptidase/ zinc ion binding | chr1:26966996-26970364 FORWARD
SynWH7803_1167 Blast Hits [TAIR_pep] AT3G16290.1 | Symbols: EMB2083 | EMB2083 (embryo defective 2083); ATP binding / ATP-dependent peptidase/ ATPase/ metalloendopeptidase/ metallopeptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase | chr3:5521187-5524995 REVERSE
SynWH7803_1181 Blast Hits [TAIR_pep] AT5G20070.1 | Symbols: ATNUDT19, ATNUDX19 | ATNUDX19 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19); hydrolase/ metal ion binding | chr5:6779893-6782308 FORWARD
SynWH7803_1903 Blast Hits [TAIR_pep] AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | chr2:13174692-13177064 FORWARD

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Gene set by search TXT
ColumnDescription and example
1Data Source Namec.f. Synechocystis
2Gene IDc.f. slr1311
3Category nameone of gene_symbol, gi_gname, definition, function, goterm, interpro, blast_hits and 'Gene and Mutants'.
4DescriptionFree text
SET
ColumnDescription and example
1Gene IDc.f. slr1311
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